RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 DGAT1O75907 488 aa14.69□□□□□ -0.06
H3F3B-213ENST00000593254 SRGAP2CP0DJJ0 459 aa14.69□□□□□ -0.06
H3F3B-213ENST00000593254 SKIP12755 728 aa14.69□□□□□ -0.06
H3F3B-213ENST00000593254 PPM1AP35813 382 aa14.69□□□□□ -0.06
H3F3B-213ENST00000593254 PBX3P40426 434 aa14.69□□□□□ -0.06
H3F3B-213ENST00000593254 RARRES1P49788 294 aa14.69□□□□□ -0.06
H3F3B-213ENST00000593254 MXD4Q14582 209 aaPredicted RBP14.69□□□□□ -0.06
H3F3B-213ENST00000593254 RABEP1Q15276 862 aa14.69□□□□□ -0.06
H3F3B-213ENST00000593254 TPRNQ4KMQ1 711 aa14.69□□□□□ -0.06
H3F3B-213ENST00000593254 NOSTRINQ8IVI9 506 aa14.69□□□□□ -0.06
H3F3B-213ENST00000593254 FAM184AQ8NB25 1140 aa14.69□□□□□ -0.06
H3F3B-213ENST00000593254 RNF149Q8NC42 400 aa14.69□□□□□ -0.06
H3F3B-213ENST00000593254 MRPL9Q9BYD2 267 aaKnown RBP14.69□□□□□ -0.06
H3F3B-213ENST00000593254 HCFC2Q9Y5Z7 792 aa14.69□□□□□ -0.06
H3F3B-213ENST00000593254 DENND4AQ7Z401 1863 aa14.69□□□□□ -0.06
H3F3B-213ENST00000593254 ASGR2P07307 311 aa14.68□□□□□ -0.06
H3F3B-213ENST00000593254 SPATA31C1P0DKV0 1188 aa14.68□□□□□ -0.06
H3F3B-213ENST00000593254 XRCC6P12956 609 aaKnown RBP eCLIP14.68□□□□□ -0.062e-12■□□□□ 10.2
H3F3B-213ENST00000593254 HOXA11P31270 313 aaPredicted RBP14.68□□□□□ -0.06
H3F3B-213ENST00000593254 TRAPPC10P48553 1259 aa14.68□□□□□ -0.06
H3F3B-213ENST00000593254 CWF19L1Q69YN2 538 aaKnown RBP14.68□□□□□ -0.06
H3F3B-213ENST00000593254 CES5AQ6NT32 575 aa14.68□□□□□ -0.06
H3F3B-213ENST00000593254 IFNLR1Q8IU57 520 aaPredicted RBP14.68□□□□□ -0.06
H3F3B-213ENST00000593254 ZDHHC14Q8IZN3 488 aa14.68□□□□□ -0.06
H3F3B-213ENST00000593254 PIGOQ8TEQ8 1089 aa14.68□□□□□ -0.06
H3F3B-213ENST00000593254 LPPQ93052 612 aa14.68□□□□□ -0.06
H3F3B-213ENST00000593254 ACACBO00763 2458 aa14.68□□□□□ -0.06
H3F3B-213ENST00000593254 MEIS3P2A8K0S8 358 aa14.67□□□□□ -0.06
H3F3B-213ENST00000593254 OR52Z1P0C646 297 aa14.67□□□□□ -0.06
H3F3B-213ENST00000593254 U2AF2P26368 475 aaKnown RBP eCLIP14.67□□□□□ -0.06
H3F3B-213ENST00000593254 MTHFRP42898 656 aa14.67□□□□□ -0.06
H3F3B-213ENST00000593254 PTENP60484 403 aa14.67□□□□□ -0.06
H3F3B-213ENST00000593254 POU5F1BQ06416 359 aa14.67□□□□□ -0.06
H3F3B-213ENST00000593254 PCBP1Q15365 356 aaKnown RBP eCLIP14.67□□□□□ -0.06
H3F3B-213ENST00000593254 ZNF174Q15697 407 aa14.67□□□□□ -0.06
H3F3B-213ENST00000593254 TTC38Q5R3I4 469 aa14.67□□□□□ -0.06
H3F3B-213ENST00000593254 GLB1LQ6UWU2 654 aa14.67□□□□□ -0.06
H3F3B-213ENST00000593254 CATSPER3Q86XQ3 398 aa14.67□□□□□ -0.06
H3F3B-213ENST00000593254 SLC39A11Q8N1S5 342 aa14.67□□□□□ -0.06
H3F3B-213ENST00000593254 MRPL43Q8N983 215 aaKnown RBP14.67□□□□□ -0.06
H3F3B-213ENST00000593254 CCDC43Q96MW1 224 aaKnown RBP14.67□□□□□ -0.06
H3F3B-213ENST00000593254 TUFT1Q9NNX1 390 aa14.67□□□□□ -0.06
H3F3B-213ENST00000593254 SPG21Q9NZD8 308 aa14.67□□□□□ -0.06
H3F3B-213ENST00000593254 USTQ9Y2C2 406 aa14.67□□□□□ -0.06
H3F3B-213ENST00000593254 PCDHB2Q9Y5E7 798 aa14.67□□□□□ -0.06
H3F3B-213ENST00000593254 SPTBN2O15020 2390 aa14.67□□□□□ -0.06
H3F3B-213ENST00000593254 TDRD15B5MCY1 1934 aaKnown RBP14.66□□□□□ -0.06
H3F3B-213ENST00000593254 C2orf71A6NGG8 1288 aa14.66□□□□□ -0.06
H3F3B-213ENST00000593254 CLASP2O75122 1294 aaKnown RBP14.66□□□□□ -0.06
H3F3B-213ENST00000593254 MED24O75448 989 aa14.66□□□□□ -0.06
H3F3B-213ENST00000593254 NPR3P17342 541 aa14.66□□□□□ -0.06
H3F3B-213ENST00000593254 AOC1P19801 751 aa14.66□□□□□ -0.06
H3F3B-213ENST00000593254 ARL2P36404 184 aa14.66□□□□□ -0.06
H3F3B-213ENST00000593254 KRT17Q04695 432 aa14.66□□□□□ -0.06
H3F3B-213ENST00000593254 GNL2Q13823 731 aaKnown RBP14.66□□□□□ -0.06
H3F3B-213ENST00000593254 CAPSQ13938 189 aa14.66□□□□□ -0.06
H3F3B-213ENST00000593254 TFDP1Q14186 410 aa14.66□□□□□ -0.06
H3F3B-213ENST00000593254 LONRF3Q496Y0 759 aa14.66□□□□□ -0.06
H3F3B-213ENST00000593254 NOMO2Q5JPE7 1267 aa14.66□□□□□ -0.06
H3F3B-213ENST00000593254 UBXN11Q5T124 520 aa14.66□□□□□ -0.06
H3F3B-213ENST00000593254 AGMOQ6ZNB7 445 aa14.66□□□□□ -0.06
H3F3B-213ENST00000593254 TMC7Q7Z402 723 aa14.66□□□□□ -0.06
H3F3B-213ENST00000593254 MRPL10Q7Z7H8 261 aaKnown RBP14.66□□□□□ -0.06
H3F3B-213ENST00000593254 ASAP3Q8TDY4 903 aa14.66□□□□□ -0.06
H3F3B-213ENST00000593254 PGBD4Q96DM1 585 aa14.66□□□□□ -0.06
H3F3B-213ENST00000593254 POLR3CQ9BUI4 534 aaPredicted RBP14.66□□□□□ -0.06
H3F3B-213ENST00000593254 NFKBIZQ9BYH8 718 aa14.66□□□□□ -0.06
H3F3B-213ENST00000593254 MFSD1Q9H3U5 465 aa14.66□□□□□ -0.06
H3F3B-213ENST00000593254 TBC1D13Q9NVG8 400 aa14.66□□□□□ -0.06
H3F3B-213ENST00000593254 LIMD1Q9UGP4 676 aa14.66□□□□□ -0.06
H3F3B-213ENST00000593254 A0A087WWV3 80 aa14.65□□□□□ -0.06
H3F3B-213ENST00000593254 CARNS1A5YM72 827 aa14.65□□□□□ -0.06
H3F3B-213ENST00000593254 PI15O43692 258 aa14.65□□□□□ -0.06
H3F3B-213ENST00000593254 TSPAN1O60635 241 aa14.65□□□□□ -0.06
H3F3B-213ENST00000593254 USO1O60763 962 aaKnown RBP14.65□□□□□ -0.06
H3F3B-213ENST00000593254 OFD1O75665 1012 aa14.65□□□□□ -0.06
H3F3B-213ENST00000593254 ERLIN2O94905 339 aa14.65□□□□□ -0.06
H3F3B-213ENST00000593254 GLRA2P23416 452 aa14.65□□□□□ -0.06
H3F3B-213ENST00000593254 RPA1P27694 616 aa14.65□□□□□ -0.06
H3F3B-213ENST00000593254 AXLP30530 894 aa14.65□□□□□ -0.06
H3F3B-213ENST00000593254 ALDH7A1P49419 539 aaKnown RBP14.65□□□□□ -0.06
H3F3B-213ENST00000593254 BCAR1P56945 870 aa14.65□□□□□ -0.06
H3F3B-213ENST00000593254 SMC1AQ14683 1233 aaKnown RBP14.65□□□□□ -0.06
H3F3B-213ENST00000593254 KIAA1841Q6NSI8 718 aa14.65□□□□□ -0.06
H3F3B-213ENST00000593254 CCDC105Q8IYK2 499 aa14.65□□□□□ -0.06
H3F3B-213ENST00000593254 PLCD3Q8N3E9 789 aa14.65□□□□□ -0.06
H3F3B-213ENST00000593254 C4orf32Q8N8J7 132 aa14.65□□□□□ -0.06
H3F3B-213ENST00000593254 TDRD5Q8NAT2 981 aaKnown RBP14.65□□□□□ -0.06
H3F3B-213ENST00000593254 NACC1Q96RE7 527 aa14.65□□□□□ -0.06
H3F3B-213ENST00000593254 DBR1Q9UK59 544 aaKnown RBP14.65□□□□□ -0.06
H3F3B-213ENST00000593254 NOL7Q9UMY1 257 aaKnown RBP14.65□□□□□ -0.06
H3F3B-213ENST00000593254 CNTNAP2Q9UHC6 1331 aa14.65□□□□□ -0.06
H3F3B-213ENST00000593254 NT5C1B-RDH14C9J2C7 533 aa14.64□□□□□ -0.07
H3F3B-213ENST00000593254 INO80B-WBP1J3KQ70 363 aa14.64□□□□□ -0.07
H3F3B-213ENST00000593254 ZC3H11AO75152 810 aaKnown RBP eCLIP14.64□□□□□ -0.07
H3F3B-213ENST00000593254 WEE2P0C1S8 567 aa14.64□□□□□ -0.07
H3F3B-213ENST00000593254 NCLP19338 710 aaKnown RBP14.64□□□□□ -0.07
H3F3B-213ENST00000593254 TOB1P50616 345 aaPredicted RBP14.64□□□□□ -0.07
H3F3B-213ENST00000593254 MBTD1Q05BQ5 628 aa14.64□□□□□ -0.07
H3F3B-213ENST00000593254 NBR1Q14596 966 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms