RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 CPB2Q96IY4 423 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 MED15Q96RN5 788 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 YME1L1Q96TA2 773 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 GAS2L1Q99501 681 aaPredicted RBP10.61□□□□□ -0.71
DDX39A-220ENST00000593008 JPH2Q9BR39 696 aaPredicted RBP10.61□□□□□ -0.71
DDX39A-220ENST00000593008 STRA6Q9BX79 667 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 INO80BQ9C086 356 aaPredicted RBP10.61□□□□□ -0.71
DDX39A-220ENST00000593008 HAPLN2Q9GZV7 340 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 TMX1Q9H3N1 280 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 ARHGAP28Q9P2N2 729 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 GBF1Q92538 1859 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 PVALEFA0A1B0GWK0 134 aa10.6□□□□□ -0.71
DDX39A-220ENST00000593008 LINC01553A4QN01 128 aa10.6□□□□□ -0.71
DDX39A-220ENST00000593008 TRIM49BA6NDI0 452 aa10.6□□□□□ -0.71
DDX39A-220ENST00000593008 ANKRD63C9JTQ0 380 aa10.6□□□□□ -0.71
DDX39A-220ENST00000593008 GAS2O43903 313 aaKnown RBP10.6□□□□□ -0.71
DDX39A-220ENST00000593008 MGEA5O60502 916 aa10.6□□□□□ -0.71
DDX39A-220ENST00000593008 TSPAN1O60635 241 aa10.6□□□□□ -0.71
DDX39A-220ENST00000593008 RPS6KA5O75582 802 aa10.6□□□□□ -0.71
DDX39A-220ENST00000593008 SMC2O95347 1197 aa10.6□□□□□ -0.71
DDX39A-220ENST00000593008 PHKA2P46019 1235 aa10.6□□□□□ -0.71
DDX39A-220ENST00000593008 DNM2P50570 870 aa10.6□□□□□ -0.71
DDX39A-220ENST00000593008 CRYBB1P53674 252 aaPredicted RBP10.6□□□□□ -0.71
DDX39A-220ENST00000593008 KLHL10Q6JEL2 608 aa10.6□□□□□ -0.71
DDX39A-220ENST00000593008 ZNF720Q7Z2F6 126 aa10.6□□□□□ -0.71
DDX39A-220ENST00000593008 ELOA2Q8IYF1 753 aaPredicted RBP10.6□□□□□ -0.71
DDX39A-220ENST00000593008 MICALL1Q8N3F8 863 aa10.6□□□□□ -0.71
DDX39A-220ENST00000593008 USP38Q8NB14 1042 aa10.6□□□□□ -0.71
DDX39A-220ENST00000593008 SPIRE2Q8WWL2 714 aa10.6□□□□□ -0.71
DDX39A-220ENST00000593008 FAM84AQ96KN4 292 aa10.6□□□□□ -0.71
DDX39A-220ENST00000593008 IFT74Q96LB3 600 aa10.6□□□□□ -0.71
DDX39A-220ENST00000593008 FUCA2Q9BTY2 467 aa10.6□□□□□ -0.71
DDX39A-220ENST00000593008 TIPINQ9BVW5 301 aa10.6□□□□□ -0.71
DDX39A-220ENST00000593008 ERVK-5Q9HDB9 667 aa10.6□□□□□ -0.71
DDX39A-220ENST00000593008 OLFML3Q9NRN5 406 aa10.6□□□□□ -0.71
DDX39A-220ENST00000593008 ST3GAL5Q9UNP4 418 aa10.6□□□□□ -0.71
DDX39A-220ENST00000593008 CTNND2Q9UQB3 1225 aa10.6□□□□□ -0.71
DDX39A-220ENST00000593008 INSL6Q9Y581 213 aa10.6□□□□□ -0.71
DDX39A-220ENST00000593008 PHLPP2Q6ZVD8 1323 aa10.59□□□□□ -0.71
DDX39A-220ENST00000593008 PTPRSQ13332 1948 aa10.59□□□□□ -0.71
DDX39A-220ENST00000593008 PPP1R3GB7ZBB8 358 aa10.59□□□□□ -0.71
DDX39A-220ENST00000593008 PRKCBP05771 671 aa10.59□□□□□ -0.71
DDX39A-220ENST00000593008 HARSP12081 509 aaKnown RBP10.59□□□□□ -0.71
DDX39A-220ENST00000593008 PTMSP20962 102 aa10.59□□□□□ -0.71
DDX39A-220ENST00000593008 PRCPP42785 496 aa10.59□□□□□ -0.71
DDX39A-220ENST00000593008 STX17P56962 302 aa10.59□□□□□ -0.71
DDX39A-220ENST00000593008 HTRA4P83105 476 aaPredicted RBP10.59□□□□□ -0.71
DDX39A-220ENST00000593008 TYRO3Q06418 890 aa10.59□□□□□ -0.71
DDX39A-220ENST00000593008 TFDP1Q14186 410 aa10.59□□□□□ -0.71
DDX39A-220ENST00000593008 MXD4Q14582 209 aaPredicted RBP10.59□□□□□ -0.71
DDX39A-220ENST00000593008 KCNB1Q14721 858 aa10.59□□□□□ -0.71
DDX39A-220ENST00000593008 SEZ6Q53EL9 994 aa10.59□□□□□ -0.71
DDX39A-220ENST00000593008 ZBTB41Q5SVQ8 909 aa10.59□□□□□ -0.71
DDX39A-220ENST00000593008 ZNF658Q5TYW1 1059 aaPredicted RBP10.59□□□□□ -0.71
DDX39A-220ENST00000593008 ZNF410Q86VK4 478 aa10.59□□□□□ -0.71
DDX39A-220ENST00000593008 EXOC8Q8IYI6 725 aa10.59□□□□□ -0.71
DDX39A-220ENST00000593008 TMEM130Q8N3G9 435 aa10.59□□□□□ -0.71
DDX39A-220ENST00000593008 GDPD5Q8WTR4 605 aa10.59□□□□□ -0.71
DDX39A-220ENST00000593008 EEF2KMTQ96G04 330 aa10.59□□□□□ -0.71
DDX39A-220ENST00000593008 ZBTB45Q96K62 511 aaPredicted RBP10.59□□□□□ -0.71
DDX39A-220ENST00000593008 ADAM2Q99965 735 aa10.59□□□□□ -0.71
DDX39A-220ENST00000593008 C17orf80Q9BSJ5 609 aa10.59□□□□□ -0.71
DDX39A-220ENST00000593008 TARS2Q9BW92 718 aaKnown RBP10.59□□□□□ -0.71
DDX39A-220ENST00000593008 LRRC27Q9C0I9 530 aa10.59□□□□□ -0.71
DDX39A-220ENST00000593008 DNAJC25Q9H1X3 360 aa10.59□□□□□ -0.71
DDX39A-220ENST00000593008 TSPYL2Q9H2G4 693 aaPredicted RBP10.59□□□□□ -0.71
DDX39A-220ENST00000593008 LARSQ9P2J5 1176 aaKnown RBP10.59□□□□□ -0.71
DDX39A-220ENST00000593008 TBX20Q9UMR3 447 aa10.59□□□□□ -0.71
DDX39A-220ENST00000593008 SQORQ9Y6N5 450 aa10.59□□□□□ -0.71
DDX39A-220ENST00000593008 UNC80Q8N2C7 3258 aa10.59□□□□□ -0.71
DDX39A-220ENST00000593008 ABLIM1O14639 778 aa10.58□□□□□ -0.72
DDX39A-220ENST00000593008 GPR182O15218 404 aa10.58□□□□□ -0.72
DDX39A-220ENST00000593008 TGFB1I1O43294 461 aa10.58□□□□□ -0.72
DDX39A-220ENST00000593008 MYL1P05976 194 aa10.58□□□□□ -0.72
DDX39A-220ENST00000593008 ARF4P18085 180 aaPredicted RBP10.58□□□□□ -0.72
DDX39A-220ENST00000593008 GATMP50440 423 aa10.58□□□□□ -0.72
DDX39A-220ENST00000593008 NLRP12P59046 1061 aa10.58□□□□□ -0.72
DDX39A-220ENST00000593008 GTF2BQ00403 316 aa10.58□□□□□ -0.72
DDX39A-220ENST00000593008 SKOR2Q2VWA4 1001 aaPredicted RBP10.58□□□□□ -0.72
DDX39A-220ENST00000593008 PAN2Q504Q3 1202 aaKnown RBP10.58□□□□□ -0.72
DDX39A-220ENST00000593008 L1TD1Q5T7N2 865 aaKnown RBP10.58□□□□□ -0.72
DDX39A-220ENST00000593008 FAM43BQ6ZT52 329 aaPredicted RBP10.58□□□□□ -0.72
DDX39A-220ENST00000593008 CATSPER4Q7RTX7 472 aa10.58□□□□□ -0.72
DDX39A-220ENST00000593008 IFNLR1Q8IU57 520 aaPredicted RBP10.58□□□□□ -0.72
DDX39A-220ENST00000593008 MAP4K3Q8IVH8 894 aa10.58□□□□□ -0.72
DDX39A-220ENST00000593008 ZBTB8OSQ8IWT0 167 aa10.58□□□□□ -0.72
DDX39A-220ENST00000593008 CEP120Q8N960 986 aa10.58□□□□□ -0.72
DDX39A-220ENST00000593008 GSDMAQ96QA5 445 aa10.58□□□□□ -0.72
DDX39A-220ENST00000593008 TGS1Q96RS0 853 aaKnown RBP10.58□□□□□ -0.72
DDX39A-220ENST00000593008 CBWD1Q9BRT8 395 aa10.58□□□□□ -0.72
DDX39A-220ENST00000593008 FTHL17Q9BXU8 183 aa10.58□□□□□ -0.72
DDX39A-220ENST00000593008 EIF2AQ9BY44 585 aaKnown RBP10.58□□□□□ -0.72
DDX39A-220ENST00000593008 GCOM2Q9BZD3 368 aaPredicted RBP10.58□□□□□ -0.72
DDX39A-220ENST00000593008 CXCL16Q9H2A7 254 aa10.58□□□□□ -0.72
DDX39A-220ENST00000593008 FZD8Q9H461 694 aa10.58□□□□□ -0.72
DDX39A-220ENST00000593008 PDZD7Q9H5P4 517 aa10.58□□□□□ -0.72
DDX39A-220ENST00000593008 RNF19AQ9NV58 838 aa10.58□□□□□ -0.72
DDX39A-220ENST00000593008 ANKFY1Q9P2R3 1169 aa10.58□□□□□ -0.72
DDX39A-220ENST00000593008 HOOK1Q9UJC3 728 aaKnown RBP10.58□□□□□ -0.72
DDX39A-220ENST00000593008 MICAL3Q7RTP6 2002 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms