RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 IGSF21Q96ID5 467 aa22.32■■□□□ 1.16
CIRBP-239ENST00000592467 NGRNQ9NPE2 291 aaKnown RBP22.32■■□□□ 1.16
CIRBP-239ENST00000592467 POMCP01189 267 aa22.31■■□□□ 1.16
CIRBP-239ENST00000592467 COASYQ13057 564 aa22.31■■□□□ 1.16
CIRBP-239ENST00000592467 MAPK7Q13164 816 aa22.31■■□□□ 1.16
CIRBP-239ENST00000592467 C1orf186Q6ZWK4 172 aa22.31■■□□□ 1.16
CIRBP-239ENST00000592467 URGCPQ8TCY9 931 aa22.31■■□□□ 1.16
CIRBP-239ENST00000592467 CDCA3Q99618 268 aaPredicted RBP22.31■■□□□ 1.16
CIRBP-239ENST00000592467 KIFC3Q9BVG8 833 aa22.31■■□□□ 1.16
CIRBP-239ENST00000592467 RUSC1Q9BVN2 902 aa22.31■■□□□ 1.16
CIRBP-239ENST00000592467 ZBP1Q9H171 429 aa22.31■■□□□ 1.16
CIRBP-239ENST00000592467 C2orf40Q9H1Z8 148 aa22.31■■□□□ 1.16
CIRBP-239ENST00000592467 UBN1Q9NPG3 1134 aa22.31■■□□□ 1.16
CIRBP-239ENST00000592467 BARX2Q9UMQ3 279 aaPredicted RBP22.31■■□□□ 1.16
CIRBP-239ENST00000592467 DNM3Q9UQ16 869 aa22.31■■□□□ 1.16
CIRBP-239ENST00000592467 USP20Q9Y2K6 914 aa22.31■■□□□ 1.16
CIRBP-239ENST00000592467 VWA3AA6NCI4 1184 aa22.3■■□□□ 1.16
CIRBP-239ENST00000592467 C2orf71A6NGG8 1288 aa22.3■■□□□ 1.16
CIRBP-239ENST00000592467 ARL5CA6NH57 179 aa22.3■■□□□ 1.16
CIRBP-239ENST00000592467 NPTXRO95502 500 aa22.3■■□□□ 1.16
CIRBP-239ENST00000592467 EFEMP2O95967 443 aa22.3■■□□□ 1.16
CIRBP-239ENST00000592467 MLH1P40692 756 aa22.3■■□□□ 1.16
CIRBP-239ENST00000592467 NDUFV1P49821 464 aa22.3■■□□□ 1.16
CIRBP-239ENST00000592467 RNASELQ05823 741 aaKnown RBP22.3■■□□□ 1.16
CIRBP-239ENST00000592467 DSC1Q08554 894 aa22.3■■□□□ 1.16
CIRBP-239ENST00000592467 NCBP1Q09161 790 aaKnown RBP22.3■■□□□ 1.16
CIRBP-239ENST00000592467 SMAD2Q15796 467 aaKnown RBP22.3■■□□□ 1.16
CIRBP-239ENST00000592467 RINT1Q6NUQ1 792 aa22.3■■□□□ 1.16
CIRBP-239ENST00000592467 TMEM184AQ6ZMB5 413 aa22.3■■□□□ 1.16
CIRBP-239ENST00000592467 BRAPQ7Z569 592 aa22.3■■□□□ 1.16
CIRBP-239ENST00000592467 DDX53Q86TM3 631 aaKnown RBP22.3■■□□□ 1.16
CIRBP-239ENST00000592467 ZBTB8OSQ8IWT0 167 aa22.3■■□□□ 1.16
CIRBP-239ENST00000592467 MRPL43Q8N983 215 aaKnown RBP22.3■■□□□ 1.16
CIRBP-239ENST00000592467 KIFAP3Q92845 792 aa22.3■■□□□ 1.16
CIRBP-239ENST00000592467 ZFP42Q96MM3 310 aa22.3■■□□□ 1.16
CIRBP-239ENST00000592467 GAD1Q99259 594 aa22.3■■□□□ 1.16
CIRBP-239ENST00000592467 TMEM175Q9BSA9 504 aa22.3■■□□□ 1.16
CIRBP-239ENST00000592467 GBP3Q9H0R5 595 aa22.3■■□□□ 1.16
CIRBP-239ENST00000592467 PDZD7Q9H5P4 517 aa22.3■■□□□ 1.16
CIRBP-239ENST00000592467 ENTPD7Q9NQZ7 604 aa22.3■■□□□ 1.16
CIRBP-239ENST00000592467 KANSL3Q9P2N6 904 aa22.3■■□□□ 1.16
CIRBP-239ENST00000592467 CD207Q9UJ71 328 aa22.3■■□□□ 1.16
CIRBP-239ENST00000592467 ACKR2O00590 384 aa22.29■■□□□ 1.16
CIRBP-239ENST00000592467 SMAD4Q13485 552 aaKnown RBP22.29■■□□□ 1.16
CIRBP-239ENST00000592467 TMEM119Q4V9L6 283 aa22.29■■□□□ 1.16
CIRBP-239ENST00000592467 TMC7Q7Z402 723 aa22.29■■□□□ 1.16
CIRBP-239ENST00000592467 COLGALT2Q8IYK4 626 aa22.29■■□□□ 1.16
CIRBP-239ENST00000592467 SMRP1Q8NCR6 262 aa22.29■■□□□ 1.16
CIRBP-239ENST00000592467 LRRC15Q8TF66 581 aa22.29■■□□□ 1.16
CIRBP-239ENST00000592467 TMEM169Q96HH4 297 aa22.29■■□□□ 1.16
CIRBP-239ENST00000592467 INTS4Q96HW7 963 aaKnown RBP22.29■■□□□ 1.16
CIRBP-239ENST00000592467 MARCH5Q9NX47 278 aa22.29■■□□□ 1.16
CIRBP-239ENST00000592467 GIT1Q9Y2X7 761 aa22.29■■□□□ 1.16
CIRBP-239ENST00000592467 ZMYM2Q9UBW7 1377 aa22.28■■□□□ 1.16
CIRBP-239ENST00000592467 CARNS1A5YM72 827 aa22.28■■□□□ 1.16
CIRBP-239ENST00000592467 C19orf67A6NJJ6 358 aa22.28■■□□□ 1.16
CIRBP-239ENST00000592467 PRKCBP05771 671 aa22.28■■□□□ 1.16
CIRBP-239ENST00000592467 AKAP5P24588 427 aa22.28■■□□□ 1.16
CIRBP-239ENST00000592467 SCNN1GP51170 649 aa22.28■■□□□ 1.16
CIRBP-239ENST00000592467 GRIN1Q05586 938 aa22.28■■□□□ 1.16
CIRBP-239ENST00000592467 ZP2Q05996 745 aa22.28■■□□□ 1.16
CIRBP-239ENST00000592467 SMC1AQ14683 1233 aaKnown RBP22.28■■□□□ 1.16
CIRBP-239ENST00000592467 PPP2R5AQ15172 486 aa22.28■■□□□ 1.16
CIRBP-239ENST00000592467 MAPK6Q16659 721 aa22.28■■□□□ 1.16
CIRBP-239ENST00000592467 EEF1DP3Q658K8 133 aa22.28■■□□□ 1.16
CIRBP-239ENST00000592467 VPS52Q8N1B4 723 aa22.28■■□□□ 1.16
CIRBP-239ENST00000592467 DEPTORQ8TB45 409 aa22.28■■□□□ 1.16
CIRBP-239ENST00000592467 IRAK3Q9Y616 596 aa22.28■■□□□ 1.16
CIRBP-239ENST00000592467 MYH11P35749 1972 aa22.28■■□□□ 1.16
CIRBP-239ENST00000592467 NRP1O14786 923 aa22.27■■□□□ 1.16
CIRBP-239ENST00000592467 HIP1RO75146 1068 aa22.27■■□□□ 1.16
CIRBP-239ENST00000592467 CTSAP10619 480 aa22.27■■□□□ 1.16
CIRBP-239ENST00000592467 SYT1P21579 422 aa22.27■■□□□ 1.16
CIRBP-239ENST00000592467 RESTQ13127 1097 aa22.27■■□□□ 1.16
CIRBP-239ENST00000592467 PRPF4BQ13523 1007 aaKnown RBP22.27■■□□□ 1.16
CIRBP-239ENST00000592467 NT5DC1Q5TFE4 455 aa22.27■■□□□ 1.16
CIRBP-239ENST00000592467 TAS1R3Q7RTX0 852 aa22.27■■□□□ 1.16
CIRBP-239ENST00000592467 RNF168Q8IYW5 571 aaPredicted RBP22.27■■□□□ 1.16
CIRBP-239ENST00000592467 KCTD17Q8N5Z5 321 aa22.27■■□□□ 1.16
CIRBP-239ENST00000592467 APOL6Q9BWW8 343 aa22.27■■□□□ 1.16
CIRBP-239ENST00000592467 TRIM6Q9C030 488 aaPredicted RBP22.27■■□□□ 1.16
CIRBP-239ENST00000592467 CXCL16Q9H2A7 254 aa22.27■■□□□ 1.16
CIRBP-239ENST00000592467 PRKAG3Q9UGI9 489 aa22.27■■□□□ 1.16
CIRBP-239ENST00000592467 FSD2A1L4K1 749 aa22.26■■□□□ 1.15
CIRBP-239ENST00000592467 VPS37CA5D8V6 355 aaPredicted RBP22.26■■□□□ 1.15
CIRBP-239ENST00000592467 GUCY2CP25092 1073 aa22.26■■□□□ 1.15
CIRBP-239ENST00000592467 NPTX2P47972 431 aa22.26■■□□□ 1.15
CIRBP-239ENST00000592467 SLC12A3P55017 1021 aa22.26■■□□□ 1.15
CIRBP-239ENST00000592467 SF3A1Q15459 793 aaKnown RBP22.26■■□□□ 1.15
CIRBP-239ENST00000592467 GJD3Q8N144 294 aa22.26■■□□□ 1.15
CIRBP-239ENST00000592467 SYT2Q8N9I0 419 aaPredicted RBP22.26■■□□□ 1.15
CIRBP-239ENST00000592467 AUTS2Q8WXX7 1259 aa22.26■■□□□ 1.15
CIRBP-239ENST00000592467 IFT74Q96LB3 600 aa22.26■■□□□ 1.15
CIRBP-239ENST00000592467 PLIN2Q99541 437 aa22.26■■□□□ 1.15
CIRBP-239ENST00000592467 F8W810 466 aa22.25■■□□□ 1.15
CIRBP-239ENST00000592467 K7ELQ4 463 aaPredicted RBP22.25■■□□□ 1.15
CIRBP-239ENST00000592467 N4BP3O15049 544 aa22.25■■□□□ 1.15
CIRBP-239ENST00000592467 LILRB3O75022 631 aa22.25■■□□□ 1.15
CIRBP-239ENST00000592467 CLASP2O75122 1294 aaKnown RBP22.25■■□□□ 1.15
CIRBP-239ENST00000592467 CXCL14O95715 111 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms