RNA–Protein interactions for RNA: ENST00000592176.1

APOC1-207, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-207ENST00000592176 SMG8Q8ND04 991 aaKnown RBP10.24□□□□□ -0.77
APOC1-207ENST00000592176 GPR152Q8TDT2 470 aa10.24□□□□□ -0.77
APOC1-207ENST00000592176 TCP11Q8WWU5 503 aa10.24□□□□□ -0.77
APOC1-207ENST00000592176 PSPC1Q8WXF1 523 aaKnown RBP10.24□□□□□ -0.77
APOC1-207ENST00000592176 CEP170P1Q96L14 293 aa10.24□□□□□ -0.77
APOC1-207ENST00000592176 JAKMIP1Q96N16 626 aaKnown RBP10.24□□□□□ -0.77
APOC1-207ENST00000592176 MBOAT7Q96N66 472 aa10.24□□□□□ -0.77
APOC1-207ENST00000592176 HINFPQ9BQA5 517 aa10.24□□□□□ -0.77
APOC1-207ENST00000592176 MIOSQ9NXC5 875 aa10.24□□□□□ -0.77
APOC1-207ENST00000592176 DDX25Q9UHL0 483 aaKnown RBP10.24□□□□□ -0.77
APOC1-207ENST00000592176 PPME1Q9Y570 386 aa10.24□□□□□ -0.77
APOC1-207ENST00000592176 MYO15AQ9UKN7 3530 aa10.24□□□□□ -0.77
APOC1-207ENST00000592176 ARL5CA6NH57 179 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 EML1O00423 815 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 TGM5O43548 720 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 EFEMP2O95967 443 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 P4HBP07237 508 aaKnown RBP10.23□□□□□ -0.77
APOC1-207ENST00000592176 PDIA3P30101 505 aaKnown RBP10.23□□□□□ -0.77
APOC1-207ENST00000592176 AXLP30530 894 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 RFC5P40937 340 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 DSG1Q02413 1049 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 SSRP1Q08945 709 aaKnown RBP10.23□□□□□ -0.77
APOC1-207ENST00000592176 PUM1Q14671 1186 aaKnown RBP eCLIP10.23□□□□□ -0.77
APOC1-207ENST00000592176 USP41Q3LFD5 358 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 LILRA6Q6PI73 481 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 MOXD1Q6UVY6 613 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 OTUD6AQ7L8S5 288 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 TRIM22Q8IYM9 498 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 FBXL16Q8N461 479 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 RNF149Q8NC42 400 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 ETNPPLQ8TBG4 499 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 RUBCNQ92622 972 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 KCNB2Q92953 911 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 ZNF707Q96C28 371 aaPredicted RBP10.23□□□□□ -0.77
APOC1-207ENST00000592176 SHDQ96IW2 340 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 GAD1Q99259 594 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 PRKD2Q9BZL6 878 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 RNF39Q9H2S5 420 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 DHX33Q9H6R0 707 aaKnown RBP10.23□□□□□ -0.77
APOC1-207ENST00000592176 NCOA5Q9HCD5 579 aaKnown RBP10.23□□□□□ -0.77
APOC1-207ENST00000592176 ARHGEF3Q9NR81 526 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.23□□□□□ -0.779e-7■■□□□ 11.5
APOC1-207ENST00000592176 CHST7Q9NS84 486 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 MARCH5Q9NX47 278 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 ZDHHC7Q9NXF8 308 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 IPPQ9Y573 584 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 DMDP11532 3685 aa10.23□□□□□ -0.77
APOC1-207ENST00000592176 RIF1Q5UIP0 2472 aaKnown RBP10.23□□□□□ -0.77
APOC1-207ENST00000592176 MED19A0JLT2 244 aaPredicted RBP10.22□□□□□ -0.77
APOC1-207ENST00000592176 ANHXE9PGG2 379 aa10.22□□□□□ -0.77
APOC1-207ENST00000592176 MARCH6O60337 910 aa10.22□□□□□ -0.77
APOC1-207ENST00000592176 ERLIN2O94905 339 aa10.22□□□□□ -0.77
APOC1-207ENST00000592176 PAPLNO95428 1278 aa10.22□□□□□ -0.77
APOC1-207ENST00000592176 RPS6KB1P23443 525 aa10.22□□□□□ -0.77
APOC1-207ENST00000592176 SCNN1GP51170 649 aa10.22□□□□□ -0.77
APOC1-207ENST00000592176 DSC1Q08554 894 aa10.22□□□□□ -0.77
APOC1-207ENST00000592176 PPP2R5CQ13362 524 aa10.22□□□□□ -0.77
APOC1-207ENST00000592176 FERMT3Q86UX7 667 aa10.22□□□□□ -0.77
APOC1-207ENST00000592176 GLYCTKQ8IVS8 523 aa10.22□□□□□ -0.77
APOC1-207ENST00000592176 RNF168Q8IYW5 571 aaPredicted RBP10.22□□□□□ -0.77
APOC1-207ENST00000592176 DCLK2Q8N568 766 aa10.22□□□□□ -0.77
APOC1-207ENST00000592176 FAM20AQ96MK3 541 aa10.22□□□□□ -0.77
APOC1-207ENST00000592176 EIF2AQ9BY44 585 aaKnown RBP10.22□□□□□ -0.77
APOC1-207ENST00000592176 AGXT2Q9BYV1 514 aa10.22□□□□□ -0.77
APOC1-207ENST00000592176 SLC2A4RGQ9NR83 387 aa10.22□□□□□ -0.77
APOC1-207ENST00000592176 DLGAP2Q9P1A6 1054 aa10.22□□□□□ -0.77
APOC1-207ENST00000592176 FNIP2Q9P278 1114 aa10.22□□□□□ -0.77
APOC1-207ENST00000592176 GIT1Q9Y2X7 761 aa10.22□□□□□ -0.77
APOC1-207ENST00000592176 SNX14Q9Y5W7 946 aa10.22□□□□□ -0.77
APOC1-207ENST00000592176 ZFP37Q9Y6Q3 630 aaPredicted RBP10.22□□□□□ -0.77
APOC1-207ENST00000592176 SPTBN4Q9H254 2564 aa10.22□□□□□ -0.77
APOC1-207ENST00000592176 MYH9P35579 1960 aaKnown RBP10.22□□□□□ -0.77
APOC1-207ENST00000592176 NID2Q14112 1375 aa10.22□□□□□ -0.77
APOC1-207ENST00000592176 M0R2N6 131 aa10.21□□□□□ -0.77
APOC1-207ENST00000592176 CDC45O75419 566 aa10.21□□□□□ -0.77
APOC1-207ENST00000592176 TADA2AO75478 443 aa10.21□□□□□ -0.77
APOC1-207ENST00000592176 ZMYND10O75800 440 aa10.21□□□□□ -0.77
APOC1-207ENST00000592176 FSHRP23945 695 aa10.21□□□□□ -0.77
APOC1-207ENST00000592176 PSMA5P28066 241 aa10.21□□□□□ -0.77
APOC1-207ENST00000592176 MLH1P40692 756 aa10.21□□□□□ -0.77
APOC1-207ENST00000592176 STARD6P59095 220 aa10.21□□□□□ -0.77
APOC1-207ENST00000592176 GPC5P78333 572 aa10.21□□□□□ -0.77
APOC1-207ENST00000592176 HTR4Q13639 388 aa10.21□□□□□ -0.77
APOC1-207ENST00000592176 PCBP1Q15365 356 aaKnown RBP eCLIP10.21□□□□□ -0.775e-16■■■■■ 49.4
APOC1-207ENST00000592176 EPHA7Q15375 998 aa10.21□□□□□ -0.77
APOC1-207ENST00000592176 INF2Q27J81 1249 aa10.21□□□□□ -0.77
APOC1-207ENST00000592176 XKR9Q5GH70 373 aa10.21□□□□□ -0.77
APOC1-207ENST00000592176 GALNT17Q6IS24 598 aa10.21□□□□□ -0.77
APOC1-207ENST00000592176 NOTUMQ6P988 496 aa10.21□□□□□ -0.77
APOC1-207ENST00000592176 POTEGQ6S5H5 508 aa10.21□□□□□ -0.77
APOC1-207ENST00000592176 GET4Q7L5D6 327 aaPredicted RBP10.21□□□□□ -0.77
APOC1-207ENST00000592176 C4orf19Q8IY42 314 aa10.21□□□□□ -0.77
APOC1-207ENST00000592176 GPR65Q8IYL9 337 aa10.21□□□□□ -0.77
APOC1-207ENST00000592176 HACE1Q8IYU2 909 aa10.21□□□□□ -0.77
APOC1-207ENST00000592176 ST13P5Q8NFI4 369 aaPredicted RBP10.21□□□□□ -0.77
APOC1-207ENST00000592176 CCDC51Q96ER9 411 aa10.21□□□□□ -0.77
APOC1-207ENST00000592176 BORCS6Q96GS4 357 aa10.21□□□□□ -0.77
APOC1-207ENST00000592176 CPB2Q96IY4 423 aa10.21□□□□□ -0.77
APOC1-207ENST00000592176 B3GALT6Q96L58 329 aa10.21□□□□□ -0.77
APOC1-207ENST00000592176 ZFP42Q96MM3 310 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms