RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 PDZD7Q9H5P4 517 aa18.09■□□□□ 0.49
CIRBP-233ENST00000591622 BLOC1S4Q9NUP1 217 aa18.09■□□□□ 0.49
CIRBP-233ENST00000591622 PUF60Q9UHX1 559 aaKnown RBP18.09■□□□□ 0.49
CIRBP-233ENST00000591622 CUL9Q8IWT3 2517 aa18.09■□□□□ 0.49
CIRBP-233ENST00000591622 CARNS1A5YM72 827 aa18.08■□□□□ 0.48
CIRBP-233ENST00000591622 ARL5CA6NH57 179 aa18.08■□□□□ 0.48
CIRBP-233ENST00000591622 N4BP3O15049 544 aa18.08■□□□□ 0.48
CIRBP-233ENST00000591622 INPPL1O15357 1258 aa18.08■□□□□ 0.48
CIRBP-233ENST00000591622 ZC3H11AO75152 810 aaKnown RBP eCLIP18.08■□□□□ 0.48
CIRBP-233ENST00000591622 EDN1P05305 212 aa18.08■□□□□ 0.48
CIRBP-233ENST00000591622 ZSCAN22P10073 491 aaPredicted RBP18.08■□□□□ 0.48
CIRBP-233ENST00000591622 NASPP49321 788 aaPredicted RBP18.08■□□□□ 0.48
CIRBP-233ENST00000591622 COL19A1Q14993 1142 aa18.08■□□□□ 0.48
CIRBP-233ENST00000591622 TMEM132AQ24JP5 1023 aa18.08■□□□□ 0.48
CIRBP-233ENST00000591622 ARSHQ5FYA8 562 aa18.08■□□□□ 0.48
CIRBP-233ENST00000591622 SPECC1Q5M775 1068 aa18.08■□□□□ 0.48
CIRBP-233ENST00000591622 ZNF280BQ86YH2 543 aa18.08■□□□□ 0.48
CIRBP-233ENST00000591622 SLC39A11Q8N1S5 342 aa18.08■□□□□ 0.48
CIRBP-233ENST00000591622 MICAL1Q8TDZ2 1067 aa18.08■□□□□ 0.48
CIRBP-233ENST00000591622 LRRC15Q8TF66 581 aa18.08■□□□□ 0.48
CIRBP-233ENST00000591622 ZNF396Q96N95 335 aaPredicted RBP18.08■□□□□ 0.48
CIRBP-233ENST00000591622 CLIC6Q96NY7 704 aa18.08■□□□□ 0.48
CIRBP-233ENST00000591622 NTPCRQ9BSD7 190 aaKnown RBP18.08■□□□□ 0.48
CIRBP-233ENST00000591622 APOL6Q9BWW8 343 aa18.08■□□□□ 0.48
CIRBP-233ENST00000591622 NRDE2Q9H7Z3 1164 aa18.08■□□□□ 0.48
CIRBP-233ENST00000591622 UBE2ZQ9H832 354 aaPredicted RBP18.08■□□□□ 0.48
CIRBP-233ENST00000591622 KMT5AQ9NQR1 393 aa18.08■□□□□ 0.48
CIRBP-233ENST00000591622 TLR9Q9NR96 1032 aa18.08■□□□□ 0.48
CIRBP-233ENST00000591622 KCNG1Q9UIX4 513 aa18.08■□□□□ 0.48
CIRBP-233ENST00000591622 USP20Q9Y2K6 914 aa18.08■□□□□ 0.48
CIRBP-233ENST00000591622 RBM19Q9Y4C8 960 aaKnown RBP18.08■□□□□ 0.48
CIRBP-233ENST00000591622 NCK2O43639 380 aa18.07■□□□□ 0.48
CIRBP-233ENST00000591622 POMCP01189 267 aa18.07■□□□□ 0.48
CIRBP-233ENST00000591622 PLS3P13797 630 aa18.07■□□□□ 0.48
CIRBP-233ENST00000591622 ERVFC1P60507 584 aa18.07■□□□□ 0.48
CIRBP-233ENST00000591622 HYAL1Q12794 435 aa18.07■□□□□ 0.48
CIRBP-233ENST00000591622 DHX8Q14562 1220 aaKnown RBP18.07■□□□□ 0.48
CIRBP-233ENST00000591622 FOXD4L5Q5VV16 416 aaPredicted RBP18.07■□□□□ 0.48
CIRBP-233ENST00000591622 KRI1Q8N9T8 703 aaKnown RBP18.07■□□□□ 0.48
CIRBP-233ENST00000591622 FOXD4L4Q8WXT5 416 aaPredicted RBP18.07■□□□□ 0.48
CIRBP-233ENST00000591622 RAD54LQ92698 747 aa18.07■□□□□ 0.48
CIRBP-233ENST00000591622 SYMPKQ92797 1274 aaKnown RBP18.07■□□□□ 0.48
CIRBP-233ENST00000591622 PPP2R3CQ969Q6 453 aa18.07■□□□□ 0.48
CIRBP-233ENST00000591622 PABPC5Q96DU9 382 aaKnown RBP18.07■□□□□ 0.48
CIRBP-233ENST00000591622 GAD1Q99259 594 aa18.07■□□□□ 0.48
CIRBP-233ENST00000591622 GBP3Q9H0R5 595 aa18.07■□□□□ 0.48
CIRBP-233ENST00000591622 TMEM134Q9H6X4 195 aa18.07■□□□□ 0.48
CIRBP-233ENST00000591622 ARHGAP28Q9P2N2 729 aa18.07■□□□□ 0.48
CIRBP-233ENST00000591622 TFIP11Q9UBB9 837 aaKnown RBP18.07■□□□□ 0.48
CIRBP-233ENST00000591622 DNAJB4Q9UDY4 337 aa18.07■□□□□ 0.48
CIRBP-233ENST00000591622 DAXXQ9UER7 740 aaPredicted RBP18.07■□□□□ 0.48
CIRBP-233ENST00000591622 CCDC39Q9UFE4 941 aa18.07■□□□□ 0.48
CIRBP-233ENST00000591622 GIT1Q9Y2X7 761 aa18.07■□□□□ 0.48
CIRBP-233ENST00000591622 PHLPP2Q6ZVD8 1323 aa18.06■□□□□ 0.48
CIRBP-233ENST00000591622 NPHP3-ACAD11A0A0J9YXS1 232 aa18.06■□□□□ 0.48
CIRBP-233ENST00000591622 NT5C1B-RDH14C9J2C7 533 aa18.06■□□□□ 0.48
CIRBP-233ENST00000591622 DLL1O00548 723 aa18.06■□□□□ 0.48
CIRBP-233ENST00000591622 B4GALT3O60512 393 aa18.06■□□□□ 0.48
CIRBP-233ENST00000591622 DDHD2O94830 711 aa18.06■□□□□ 0.48
CIRBP-233ENST00000591622 F13A1P00488 732 aa18.06■□□□□ 0.48
CIRBP-233ENST00000591622 GALTP07902 379 aa18.06■□□□□ 0.48
CIRBP-233ENST00000591622 AKAP5P24588 427 aa18.06■□□□□ 0.48
CIRBP-233ENST00000591622 DDIT3P35638 169 aa18.06■□□□□ 0.48
CIRBP-233ENST00000591622 MLH1P40692 756 aa18.06■□□□□ 0.48
CIRBP-233ENST00000591622 MCM6Q14566 821 aa18.06■□□□□ 0.48
CIRBP-233ENST00000591622 STK38Q15208 465 aa18.06■□□□□ 0.48
CIRBP-233ENST00000591622 NT5DC1Q5TFE4 455 aa18.06■□□□□ 0.48
CIRBP-233ENST00000591622 PDE12Q6L8Q7 609 aaKnown RBP18.06■□□□□ 0.48
CIRBP-233ENST00000591622 GPBP1Q86WP2 473 aa18.06■□□□□ 0.48
CIRBP-233ENST00000591622 LINC00301Q8NCQ3 95 aa18.06■□□□□ 0.48
CIRBP-233ENST00000591622 SPIRE2Q8WWL2 714 aa18.06■□□□□ 0.48
CIRBP-233ENST00000591622 LARP4BQ92615 738 aaKnown RBP18.06■□□□□ 0.48
CIRBP-233ENST00000591622 ZFP42Q96MM3 310 aa18.06■□□□□ 0.48
CIRBP-233ENST00000591622 ADPGKQ9BRR6 497 aa18.06■□□□□ 0.48
CIRBP-233ENST00000591622 COL25A1Q9BXS0 654 aaPredicted RBP18.06■□□□□ 0.48
CIRBP-233ENST00000591622 ODF2LQ9ULJ1 636 aa18.06■□□□□ 0.48
CIRBP-233ENST00000591622 PCDHGC5Q9Y5F6 944 aa18.06■□□□□ 0.48
CIRBP-233ENST00000591622 FSCN2O14926 492 aa18.05■□□□□ 0.48
CIRBP-233ENST00000591622 SLC16A4O15374 487 aa18.05■□□□□ 0.48
CIRBP-233ENST00000591622 BMP1P13497 986 aa18.05■□□□□ 0.48
CIRBP-233ENST00000591622 KCNA5P22460 613 aa18.05■□□□□ 0.48
CIRBP-233ENST00000591622 TXLNAP40222 546 aa18.05■□□□□ 0.48
CIRBP-233ENST00000591622 SLC11A1P49279 550 aa18.05■□□□□ 0.48
CIRBP-233ENST00000591622 KCNQ1P51787 676 aa18.05■□□□□ 0.48
CIRBP-233ENST00000591622 SMTNP53814 917 aa18.05■□□□□ 0.48
CIRBP-233ENST00000591622 CACNB1Q02641 598 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-233ENST00000591622 PKP1Q13835 747 aa18.05■□□□□ 0.48
CIRBP-233ENST00000591622 CTC1Q2NKJ3 1217 aa18.05■□□□□ 0.48
CIRBP-233ENST00000591622 ATF7IP2Q5U623 682 aa18.05■□□□□ 0.48
CIRBP-233ENST00000591622 EEF1DP3Q658K8 133 aa18.05■□□□□ 0.48
CIRBP-233ENST00000591622 TAS1R3Q7RTX0 852 aa18.05■□□□□ 0.48
CIRBP-233ENST00000591622 ADGRD2Q7Z7M1 963 aa18.05■□□□□ 0.48
CIRBP-233ENST00000591622 TMEM173Q86WV6 379 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-233ENST00000591622 TMEM169Q96HH4 297 aa18.05■□□□□ 0.48
CIRBP-233ENST00000591622 IGSF21Q96ID5 467 aa18.05■□□□□ 0.48
CIRBP-233ENST00000591622 FAM193BQ96PV7 902 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-233ENST00000591622 REEP2Q9BRK0 252 aa18.05■□□□□ 0.48
CIRBP-233ENST00000591622 IGFLR1Q9H665 355 aa18.05■□□□□ 0.48
CIRBP-233ENST00000591622 CLDND1Q9NY35 253 aa18.05■□□□□ 0.48
CIRBP-233ENST00000591622 LARSQ9P2J5 1176 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms