RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 VN1R2Q8NFZ6 395 aa10.58□□□□□ -0.72
BRCA1-226ENST00000591534 PGBD4Q96DM1 585 aa10.58□□□□□ -0.72
BRCA1-226ENST00000591534 TRAIPQ9BWF2 469 aa10.58□□□□□ -0.72
BRCA1-226ENST00000591534 NIFKQ9BYG3 293 aaKnown RBP10.58□□□□□ -0.72
BRCA1-226ENST00000591534 MYO7AQ13402 2215 aa10.57□□□□□ -0.72
BRCA1-226ENST00000591534 NID2Q14112 1375 aa10.57□□□□□ -0.72
BRCA1-226ENST00000591534 C2orf71A6NGG8 1288 aa10.57□□□□□ -0.72
BRCA1-226ENST00000591534 HIDE1A8MVS5 230 aa10.57□□□□□ -0.72
BRCA1-226ENST00000591534 CPLX1O14810 134 aa10.57□□□□□ -0.72
BRCA1-226ENST00000591534 RPS6KB1P23443 525 aa10.57□□□□□ -0.72
BRCA1-226ENST00000591534 BCAR1P56945 870 aa10.57□□□□□ -0.72
BRCA1-226ENST00000591534 RNASELQ05823 741 aaKnown RBP10.57□□□□□ -0.72
BRCA1-226ENST00000591534 SSRP1Q08945 709 aaKnown RBP10.57□□□□□ -0.72
BRCA1-226ENST00000591534 Q4G0T1 1027 aa10.57□□□□□ -0.72
BRCA1-226ENST00000591534 TWF2Q6IBS0 349 aaKnown RBP10.57□□□□□ -0.72
BRCA1-226ENST00000591534 SYCE2Q6PIF2 218 aa10.57□□□□□ -0.72
BRCA1-226ENST00000591534 URGCPQ8TCY9 931 aa10.57□□□□□ -0.72
BRCA1-226ENST00000591534 HELQQ8TDG4 1101 aa10.57□□□□□ -0.72
BRCA1-226ENST00000591534 SLC5A5Q92911 643 aa10.57□□□□□ -0.72
BRCA1-226ENST00000591534 PHKBQ93100 1093 aa10.57□□□□□ -0.72
BRCA1-226ENST00000591534 DPP7Q9UHL4 492 aa10.57□□□□□ -0.72
BRCA1-226ENST00000591534 SORCS3Q9UPU3 1222 aa10.57□□□□□ -0.72
BRCA1-226ENST00000591534 PPME1Q9Y570 386 aa10.57□□□□□ -0.72
BRCA1-226ENST00000591534 HCFC2Q9Y5Z7 792 aa10.57□□□□□ -0.72
BRCA1-226ENST00000591534 WDFY4Q6ZS81 3184 aa10.57□□□□□ -0.72
BRCA1-226ENST00000591534 TRIOO75962 3097 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-226ENST00000591534 ADAMTS3O15072 1205 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 ZNF862O60290 1169 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 ZC3H11AO75152 810 aaKnown RBP eCLIP10.56□□□□□ -0.72
BRCA1-226ENST00000591534 AVPR2P30518 371 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 PHKA2P46019 1235 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 RBM10P98175 930 aaKnown RBP10.56□□□□□ -0.72
BRCA1-226ENST00000591534 NCBP1Q09161 790 aaKnown RBP10.56□□□□□ -0.72
BRCA1-226ENST00000591534 MTERF2Q49AM1 385 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 CLLU1OSQ5K130 101 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 PLA2G2CQ5R387 149 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 MOXD1Q6UVY6 613 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 CATSPER4Q7RTX7 472 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 ZNF598Q86UK7 904 aaKnown RBP10.56□□□□□ -0.72
BRCA1-226ENST00000591534 VPS52Q8N1B4 723 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 TDRD5Q8NAT2 981 aaKnown RBP10.56□□□□□ -0.72
BRCA1-226ENST00000591534 KREMEN2Q8NCW0 462 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 PRSS33Q8NF86 280 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 TBCKQ8TEA7 893 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 SLC7A3Q8WY07 619 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 ATOH1Q92858 354 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-226ENST00000591534 LENG9Q96B70 501 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 ACSF2Q96CM8 615 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-226ENST00000591534 ASIC4Q96FT7 647 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 NAP1L4Q99733 375 aaKnown RBP10.56□□□□□ -0.72
BRCA1-226ENST00000591534 APOL5Q9BWW9 433 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 EMILIN2Q9BXX0 1053 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 UNC45AQ9H3U1 944 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 RNF19AQ9NV58 838 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 VPS54Q9P1Q0 977 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 KANSL3Q9P2N6 904 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 SUCLA2Q9P2R7 463 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-226ENST00000591534 DBR1Q9UK59 544 aaKnown RBP10.56□□□□□ -0.72
BRCA1-226ENST00000591534 PCDHA4Q9UN74 947 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 PIN4Q9Y237 131 aaKnown RBP10.56□□□□□ -0.72
BRCA1-226ENST00000591534 USTQ9Y2C2 406 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 SSX2IPQ9Y2D8 614 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 IRAK3Q9Y616 596 aa10.56□□□□□ -0.72
BRCA1-226ENST00000591534 CYP3A7-CYP3A51PA0A087WV96 503 aa10.55□□□□□ -0.72
BRCA1-226ENST00000591534 RNF223E7ERA6 249 aa10.55□□□□□ -0.72
BRCA1-226ENST00000591534 MARCH6O60337 910 aa10.55□□□□□ -0.72
BRCA1-226ENST00000591534 CLASP2O75122 1294 aaKnown RBP10.55□□□□□ -0.72
BRCA1-226ENST00000591534 ZNF623O75123 536 aa10.55□□□□□ -0.72
BRCA1-226ENST00000591534 MAFO75444 373 aaPredicted RBP10.55□□□□□ -0.72
BRCA1-226ENST00000591534 PSMD10O75832 226 aa10.55□□□□□ -0.72
BRCA1-226ENST00000591534 DEXIO95424 95 aa10.55□□□□□ -0.72
BRCA1-226ENST00000591534 XBP1P17861 261 aa10.55□□□□□ -0.72
BRCA1-226ENST00000591534 CYP3A7P24462 503 aa10.55□□□□□ -0.72
BRCA1-226ENST00000591534 PBX3P40426 434 aa10.55□□□□□ -0.72
BRCA1-226ENST00000591534 PSMC5P62195 406 aa10.55□□□□□ -0.72
BRCA1-226ENST00000591534 TARBP2Q15633 366 aaKnown RBP10.55□□□□□ -0.72
BRCA1-226ENST00000591534 NOMO2Q5JPE7 1267 aa10.55□□□□□ -0.72
BRCA1-226ENST00000591534 DDX53Q86TM3 631 aaKnown RBP10.55□□□□□ -0.72
BRCA1-226ENST00000591534 CABP7Q86V35 215 aa10.55□□□□□ -0.72
BRCA1-226ENST00000591534 RHPN2Q8IUC4 686 aa10.55□□□□□ -0.72
BRCA1-226ENST00000591534 ZDHHC14Q8IZN3 488 aa10.55□□□□□ -0.72
BRCA1-226ENST00000591534 PHTF2Q8N3S3 785 aa10.55□□□□□ -0.72
BRCA1-226ENST00000591534 ZNF511Q8NB15 262 aa10.55□□□□□ -0.72
BRCA1-226ENST00000591534 ZNF668Q96K58 619 aaPredicted RBP10.55□□□□□ -0.72
BRCA1-226ENST00000591534 FAM193BQ96PV7 902 aaPredicted RBP10.55□□□□□ -0.72
BRCA1-226ENST00000591534 AGXT2Q9BYV1 514 aa10.55□□□□□ -0.72
BRCA1-226ENST00000591534 SLKQ9H2G2 1235 aaPredicted RBP10.55□□□□□ -0.72
BRCA1-226ENST00000591534 MFSD1Q9H3U5 465 aa10.55□□□□□ -0.72
BRCA1-226ENST00000591534 UBN1Q9NPG3 1134 aa10.55□□□□□ -0.72
BRCA1-226ENST00000591534 A0A087WZ62 844 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 IGKV6-21A0A0C4DH24 114 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 GAS2O43903 313 aaKnown RBP10.54□□□□□ -0.72
BRCA1-226ENST00000591534 DTNBO60941 627 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 CDKL5O76039 1030 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 ALDH2P05091 517 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 CTSAP10619 480 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 FGFR4P22455 802 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 SP100P23497 879 aaPredicted RBP10.54□□□□□ -0.72
BRCA1-226ENST00000591534 PDIA3P30101 505 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms