RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 TMEM206Q9H813 350 aa20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 CNTNAP2Q9UHC6 1331 aa20.11■□□□□ 0.81
CROCCP3-205ENST00000591316 HARSP12081 509 aaKnown RBP20.11■□□□□ 0.81
CROCCP3-205ENST00000591316 BMP6P22004 513 aa20.11■□□□□ 0.81
CROCCP3-205ENST00000591316 DSC3Q14574 896 aa20.11■□□□□ 0.81
CROCCP3-205ENST00000591316 HVCN1Q96D96 273 aa20.11■□□□□ 0.81
CROCCP3-205ENST00000591316 EIF2AQ9BY44 585 aaKnown RBP20.11■□□□□ 0.81
CROCCP3-205ENST00000591316 UBE2OQ9C0C9 1292 aaKnown RBP20.11■□□□□ 0.81
CROCCP3-205ENST00000591316 PDZD7Q9H5P4 517 aa20.11■□□□□ 0.81
CROCCP3-205ENST00000591316 ANKFY1Q9P2R3 1169 aa20.11■□□□□ 0.81
CROCCP3-205ENST00000591316 ABHD14A-ACY1A0A1B0GW23 586 aa20.1■□□□□ 0.81
CROCCP3-205ENST00000591316 N4BP3O15049 544 aa20.1■□□□□ 0.81
CROCCP3-205ENST00000591316 NPTXRO95502 500 aa20.1■□□□□ 0.81
CROCCP3-205ENST00000591316 KNOP1Q1ED39 458 aaKnown RBP20.1■□□□□ 0.81
CROCCP3-205ENST00000591316 PSRC1Q6PGN9 363 aaPredicted RBP20.1■□□□□ 0.81
CROCCP3-205ENST00000591316 LINC01599Q8WXQ3 324 aa20.1■□□□□ 0.81
CROCCP3-205ENST00000591316 KCNN1Q92952 543 aa20.1■□□□□ 0.81
CROCCP3-205ENST00000591316 TRIM6Q9C030 488 aaPredicted RBP20.1■□□□□ 0.81
CROCCP3-205ENST00000591316 RGS18Q9NS28 235 aa20.1■□□□□ 0.81
CROCCP3-205ENST00000591316 TNFSF13BQ9Y275 285 aa20.1■□□□□ 0.81
CROCCP3-205ENST00000591316 TANC1Q9C0D5 1861 aa20.1■□□□□ 0.81
CROCCP3-205ENST00000591316 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.09■□□□□ 0.81
CROCCP3-205ENST00000591316 CLDN3O15551 220 aa20.09■□□□□ 0.81
CROCCP3-205ENST00000591316 UPP2O95045 317 aa20.09■□□□□ 0.81
CROCCP3-205ENST00000591316 SLC27A1Q6PCB7 646 aa20.09■□□□□ 0.81
CROCCP3-205ENST00000591316 SASS6Q6UVJ0 657 aa20.09■□□□□ 0.81
CROCCP3-205ENST00000591316 ZPBP2Q6X784 338 aa20.09■□□□□ 0.81
CROCCP3-205ENST00000591316 RNF169Q8NCN4 708 aa20.09■□□□□ 0.81
CROCCP3-205ENST00000591316 GDF15Q99988 308 aa20.09■□□□□ 0.81
CROCCP3-205ENST00000591316 ADPGKQ9BRR6 497 aa20.09■□□□□ 0.81
CROCCP3-205ENST00000591316 TSPYL2Q9H2G4 693 aaPredicted RBP20.09■□□□□ 0.81
CROCCP3-205ENST00000591316 TULP1O00294 542 aaPredicted RBP20.08■□□□□ 0.81
CROCCP3-205ENST00000591316 CLIC2O15247 247 aa20.08■□□□□ 0.81
CROCCP3-205ENST00000591316 TOM1L1O75674 476 aa20.08■□□□□ 0.81
CROCCP3-205ENST00000591316 KIF20AO95235 890 aa20.08■□□□□ 0.81
CROCCP3-205ENST00000591316 CD44P16070 742 aaKnown RBP20.08■□□□□ 0.81
CROCCP3-205ENST00000591316 SHHQ15465 462 aa20.08■□□□□ 0.81
CROCCP3-205ENST00000591316 ZNF568Q3ZCX4 644 aa20.08■□□□□ 0.81
CROCCP3-205ENST00000591316 C9orf50Q5SZB4 431 aa20.08■□□□□ 0.81
CROCCP3-205ENST00000591316 UBXN11Q5T124 520 aa20.08■□□□□ 0.81
CROCCP3-205ENST00000591316 KLHL10Q6JEL2 608 aa20.08■□□□□ 0.81
CROCCP3-205ENST00000591316 SLC39A4Q6P5W5 647 aa20.08■□□□□ 0.81
CROCCP3-205ENST00000591316 RBM43Q6ZSC3 357 aaKnown RBP20.08■□□□□ 0.81
CROCCP3-205ENST00000591316 SLC24A5Q71RS6 500 aa20.08■□□□□ 0.81
CROCCP3-205ENST00000591316 TRIML1Q8N9V2 468 aa20.08■□□□□ 0.81
CROCCP3-205ENST00000591316 GBP3Q9H0R5 595 aa20.08■□□□□ 0.81
CROCCP3-205ENST00000591316 PTPRHQ9HD43 1115 aa20.08■□□□□ 0.81
CROCCP3-205ENST00000591316 FAM105AQ9NUU6 356 aa20.08■□□□□ 0.81
CROCCP3-205ENST00000591316 CXXC1Q9P0U4 656 aaPredicted RBP20.08■□□□□ 0.81
CROCCP3-205ENST00000591316 PCDHB2Q9Y5E7 798 aa20.08■□□□□ 0.81
CROCCP3-205ENST00000591316 TGFB1I1O43294 461 aa20.08■□□□□ 0.8
CROCCP3-205ENST00000591316 OSTNP61366 133 aa20.08■□□□□ 0.8
CROCCP3-205ENST00000591316 BMT2Q1RMZ1 405 aa20.08■□□□□ 0.8
CROCCP3-205ENST00000591316 SEZ6Q53EL9 994 aa20.08■□□□□ 0.8
CROCCP3-205ENST00000591316 MPZL3Q6UWV2 235 aa20.08■□□□□ 0.8
CROCCP3-205ENST00000591316 TMCO2Q7Z6W1 182 aaPredicted RBP20.08■□□□□ 0.8
CROCCP3-205ENST00000591316 GUF1Q8N442 669 aaKnown RBP20.08■□□□□ 0.8
CROCCP3-205ENST00000591316 NOC3LQ8WTT2 800 aaKnown RBP20.08■□□□□ 0.8
CROCCP3-205ENST00000591316 POMGNT1Q8WZA1 660 aa20.08■□□□□ 0.8
CROCCP3-205ENST00000591316 APOL6Q9BWW8 343 aa20.08■□□□□ 0.8
CROCCP3-205ENST00000591316 HAPLN2Q9GZV7 340 aa20.08■□□□□ 0.8
CROCCP3-205ENST00000591316 PCIF1Q9H4Z3 704 aa20.08■□□□□ 0.8
CROCCP3-205ENST00000591316 HES2Q9Y543 173 aa20.08■□□□□ 0.8
CROCCP3-205ENST00000591316 LTBP2Q14767 1821 aa20.07■□□□□ 0.8
CROCCP3-205ENST00000591316 A0A0U1RQF3 1178 aa20.07■□□□□ 0.8
CROCCP3-205ENST00000591316 C9IYK1 514 aa20.07■□□□□ 0.8
CROCCP3-205ENST00000591316 BAIAP3O94812 1187 aa20.07■□□□□ 0.8
CROCCP3-205ENST00000591316 PIGRP01833 764 aa20.07■□□□□ 0.8
CROCCP3-205ENST00000591316 KCNJ6P48051 423 aa20.07■□□□□ 0.8
CROCCP3-205ENST00000591316 NLRP12P59046 1061 aa20.07■□□□□ 0.8
CROCCP3-205ENST00000591316 WDR5P61964 334 aaKnown RBP20.07■□□□□ 0.8
CROCCP3-205ENST00000591316 DEFB103AP81534 67 aa20.07■□□□□ 0.8
CROCCP3-205ENST00000591316 STIM1Q13586 685 aa20.07■□□□□ 0.8
CROCCP3-205ENST00000591316 FAM117BQ6P1L5 589 aa20.07■□□□□ 0.8
CROCCP3-205ENST00000591316 THNSL1Q8IYQ7 743 aa20.07■□□□□ 0.8
CROCCP3-205ENST00000591316 ADSSL1Q8N142 457 aa20.07■□□□□ 0.8
CROCCP3-205ENST00000591316 HERVK_113Q902F9 699 aa20.07■□□□□ 0.8
CROCCP3-205ENST00000591316 CCDC51Q96ER9 411 aa20.07■□□□□ 0.8
CROCCP3-205ENST00000591316 GTPBP4Q9BZE4 634 aaKnown RBP20.07■□□□□ 0.8
CROCCP3-205ENST00000591316 GZF1Q9H116 711 aaPredicted RBP20.07■□□□□ 0.8
CROCCP3-205ENST00000591316 CDT1Q9H211 546 aa20.07■□□□□ 0.8
CROCCP3-205ENST00000591316 C1orf112Q9NSG2 853 aa20.07■□□□□ 0.8
CROCCP3-205ENST00000591316 PCDHB7Q9Y5E2 793 aa20.07■□□□□ 0.8
CROCCP3-205ENST00000591316 UBE4BO95155 1302 aa20.07■□□□□ 0.8
CROCCP3-205ENST00000591316 PPP1R3GB7ZBB8 358 aa20.06■□□□□ 0.8
CROCCP3-205ENST00000591316 PROZP22891 400 aa20.06■□□□□ 0.8
CROCCP3-205ENST00000591316 ADSSP30520 456 aa20.06■□□□□ 0.8
CROCCP3-205ENST00000591316 SLFN12LQ6IEE8 588 aa20.06■□□□□ 0.8
CROCCP3-205ENST00000591316 HS2ST1Q7LGA3 356 aa20.06■□□□□ 0.8
CROCCP3-205ENST00000591316 ECHDC2Q86YB7 292 aa20.06■□□□□ 0.8
CROCCP3-205ENST00000591316 LPPQ93052 612 aa20.06■□□□□ 0.8
CROCCP3-205ENST00000591316 MSTO1Q9BUK6 570 aa20.06■□□□□ 0.8
CROCCP3-205ENST00000591316 KCTD10Q9H3F6 313 aa20.06■□□□□ 0.8
CROCCP3-205ENST00000591316 LRFN2Q9ULH4 789 aa20.06■□□□□ 0.8
CROCCP3-205ENST00000591316 IPPQ9Y573 584 aa20.06■□□□□ 0.8
CROCCP3-205ENST00000591316 ZMYM2Q9UBW7 1377 aa20.06■□□□□ 0.8
CROCCP3-205ENST00000591316 SYCE3A1L190 88 aa20.05■□□□□ 0.8
CROCCP3-205ENST00000591316 ABLIM1O14639 778 aa20.05■□□□□ 0.8
CROCCP3-205ENST00000591316 EFCAB14O75071 495 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms