RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 CDC42EP1Q00587 391 aa23.7■■□□□ 1.38
R3HDM4-206ENST00000590454 ADAM15Q13444 863 aa23.7■■□□□ 1.38
R3HDM4-206ENST00000590454 DDX12PQ92771 950 aa23.7■■□□□ 1.38
R3HDM4-206ENST00000590454 DNAJC19Q96DA6 116 aa23.7■■□□□ 1.38
R3HDM4-206ENST00000590454 PLVAPQ9BX97 442 aa23.7■■□□□ 1.38
R3HDM4-206ENST00000590454 ST3GAL5Q9UNP4 418 aa23.7■■□□□ 1.38
R3HDM4-206ENST00000590454 SQORQ9Y6N5 450 aa23.7■■□□□ 1.38
R3HDM4-206ENST00000590454 RALGAPA2Q2PPJ7 1873 aa23.7■■□□□ 1.38
R3HDM4-206ENST00000590454 MYH11P35749 1972 aa23.69■■□□□ 1.38
R3HDM4-206ENST00000590454 NLRC5Q86WI3 1866 aa23.69■■□□□ 1.38
R3HDM4-206ENST00000590454 PRPF40AO75400 957 aaKnown RBP23.69■■□□□ 1.38
R3HDM4-206ENST00000590454 KRT18P05783 430 aaKnown RBP23.69■■□□□ 1.38
R3HDM4-206ENST00000590454 GTF2F1P35269 517 aaKnown RBP eCLIP23.69■■□□□ 1.386e-7■■■■■ 37.8
R3HDM4-206ENST00000590454 PTPN5P54829 565 aa23.69■■□□□ 1.38
R3HDM4-206ENST00000590454 PEX3P56589 373 aa23.69■■□□□ 1.38
R3HDM4-206ENST00000590454 PTENP60484 403 aa23.69■■□□□ 1.38
R3HDM4-206ENST00000590454 PAK2Q13177 524 aa23.69■■□□□ 1.38
R3HDM4-206ENST00000590454 BTG3Q14201 252 aaPredicted RBP23.69■■□□□ 1.38
R3HDM4-206ENST00000590454 PPP2R3CQ969Q6 453 aa23.69■■□□□ 1.38
R3HDM4-206ENST00000590454 DRC1Q96MC2 740 aa23.69■■□□□ 1.38
R3HDM4-206ENST00000590454 PRRX2Q99811 253 aa23.69■■□□□ 1.38
R3HDM4-206ENST00000590454 TIPINQ9BVW5 301 aa23.69■■□□□ 1.38
R3HDM4-206ENST00000590454 CUEDC2Q9H467 287 aa23.69■■□□□ 1.38
R3HDM4-206ENST00000590454 RC3H2Q9HBD1 1191 aaKnown RBP23.69■■□□□ 1.38
R3HDM4-206ENST00000590454 ENPP3O14638 875 aa23.68■■□□□ 1.38
R3HDM4-206ENST00000590454 LINC01565O15544 149 aa23.68■■□□□ 1.38
R3HDM4-206ENST00000590454 SLFN14P0C7P3 912 aa23.68■■□□□ 1.38
R3HDM4-206ENST00000590454 LIG1P18858 919 aa23.68■■□□□ 1.38
R3HDM4-206ENST00000590454 AFMP43652 599 aa23.68■■□□□ 1.38
R3HDM4-206ENST00000590454 PHKA2P46019 1235 aa23.68■■□□□ 1.38
R3HDM4-206ENST00000590454 NPTX2P47972 431 aa23.68■■□□□ 1.38
R3HDM4-206ENST00000590454 NFX1Q12986 1120 aaKnown RBP23.68■■□□□ 1.38
R3HDM4-206ENST00000590454 SNW1Q13573 536 aaKnown RBP23.68■■□□□ 1.38
R3HDM4-206ENST00000590454 TFDP1Q14186 410 aa23.68■■□□□ 1.38
R3HDM4-206ENST00000590454 FMR1NBQ8N0W7 255 aaPredicted RBP23.68■■□□□ 1.38
R3HDM4-206ENST00000590454 ZNF710Q8N1W2 664 aa23.68■■□□□ 1.38
R3HDM4-206ENST00000590454 PRSS33Q8NF86 280 aa23.68■■□□□ 1.38
R3HDM4-206ENST00000590454 ENGASEQ8NFI3 743 aa23.68■■□□□ 1.38
R3HDM4-206ENST00000590454 LINC01599Q8WXQ3 324 aa23.68■■□□□ 1.38
R3HDM4-206ENST00000590454 PBXIP1Q96AQ6 731 aa23.68■■□□□ 1.38
R3HDM4-206ENST00000590454 ZNF689Q96CS4 500 aaPredicted RBP23.68■■□□□ 1.38
R3HDM4-206ENST00000590454 PHOX2BQ99453 314 aa23.68■■□□□ 1.38
R3HDM4-206ENST00000590454 TNMDQ9H2S6 317 aa23.68■■□□□ 1.38
R3HDM4-206ENST00000590454 MGEA5O60502 916 aa23.67■■□□□ 1.38
R3HDM4-206ENST00000590454 ZNF202O95125 648 aa23.67■■□□□ 1.38
R3HDM4-206ENST00000590454 PLS3P13797 630 aa23.67■■□□□ 1.38
R3HDM4-206ENST00000590454 NAMPTP43490 491 aa23.67■■□□□ 1.38
R3HDM4-206ENST00000590454 NDUFV1P49821 464 aa23.67■■□□□ 1.38
R3HDM4-206ENST00000590454 ZNF131P52739 623 aa23.67■■□□□ 1.38
R3HDM4-206ENST00000590454 MBTD1Q05BQ5 628 aa23.67■■□□□ 1.38
R3HDM4-206ENST00000590454 CDCA2Q69YH5 1023 aaPredicted RBP23.67■■□□□ 1.38
R3HDM4-206ENST00000590454 TRIM67Q6ZTA4 783 aa23.67■■□□□ 1.38
R3HDM4-206ENST00000590454 SRGAP1Q7Z6B7 1085 aa23.67■■□□□ 1.38
R3HDM4-206ENST00000590454 RTN4RL1Q86UN2 441 aaPredicted RBP23.67■■□□□ 1.38
R3HDM4-206ENST00000590454 IFNLR1Q8IU57 520 aaPredicted RBP23.67■■□□□ 1.38
R3HDM4-206ENST00000590454 PAGE5Q96GU1 130 aa23.67■■□□□ 1.38
R3HDM4-206ENST00000590454 IFT74Q96LB3 600 aa23.67■■□□□ 1.38
R3HDM4-206ENST00000590454 BLZF1Q9H2G9 400 aa23.67■■□□□ 1.38
R3HDM4-206ENST00000590454 ZHX3Q9H4I2 956 aa23.67■■□□□ 1.38
R3HDM4-206ENST00000590454 ALG13Q9NP73 1137 aaKnown RBP23.67■■□□□ 1.38
R3HDM4-206ENST00000590454 ODF2LQ9ULJ1 636 aa23.67■■□□□ 1.38
R3HDM4-206ENST00000590454 PLAGL2Q9UPG8 496 aa23.67■■□□□ 1.38
R3HDM4-206ENST00000590454 USP20Q9Y2K6 914 aa23.67■■□□□ 1.38
R3HDM4-206ENST00000590454 TMEM221A6NGB7 291 aa23.66■■□□□ 1.38
R3HDM4-206ENST00000590454 CCDC169A6NNP5 214 aa23.66■■□□□ 1.38
R3HDM4-206ENST00000590454 M0R296 226 aa23.66■■□□□ 1.38
R3HDM4-206ENST00000590454 FAM13AO94988 1023 aa23.66■■□□□ 1.38
R3HDM4-206ENST00000590454 CSPG5O95196 566 aa23.66■■□□□ 1.38
R3HDM4-206ENST00000590454 EDN1P05305 212 aa23.66■■□□□ 1.38
R3HDM4-206ENST00000590454 POU5F1BQ06416 359 aa23.66■■□□□ 1.38
R3HDM4-206ENST00000590454 P2RX5Q93086 422 aa23.66■■□□□ 1.38
R3HDM4-206ENST00000590454 MSLNLQ96KJ4 702 aa23.66■■□□□ 1.38
R3HDM4-206ENST00000590454 TRIM9Q9C026 710 aa23.66■■□□□ 1.38
R3HDM4-206ENST00000590454 TTLL13PA6NNM8 815 aa23.65■■□□□ 1.38
R3HDM4-206ENST00000590454 INO80B-WBP1J3KQ70 363 aa23.65■■□□□ 1.38
R3HDM4-206ENST00000590454 GPR182O15218 404 aa23.65■■□□□ 1.38
R3HDM4-206ENST00000590454 SLC16A4O15374 487 aa23.65■■□□□ 1.38
R3HDM4-206ENST00000590454 NR1I2O75469 434 aa23.65■■□□□ 1.38
R3HDM4-206ENST00000590454 DGKIO75912 1065 aa23.65■■□□□ 1.38
R3HDM4-206ENST00000590454 PRR29P0C7W0 189 aa23.65■■□□□ 1.38
R3HDM4-206ENST00000590454 DMP1Q13316 513 aaPredicted RBP23.65■■□□□ 1.38
R3HDM4-206ENST00000590454 CUL4BQ13620 913 aa23.65■■□□□ 1.38
R3HDM4-206ENST00000590454 CAMK1Q14012 370 aa23.65■■□□□ 1.38
R3HDM4-206ENST00000590454 AMHR2Q16671 573 aa23.65■■□□□ 1.38
R3HDM4-206ENST00000590454 IER5LQ5T953 404 aa23.65■■□□□ 1.38
R3HDM4-206ENST00000590454 KRBA2Q6ZNG9 492 aa23.65■■□□□ 1.38
R3HDM4-206ENST00000590454 SUGP1Q8IWZ8 645 aaKnown RBP23.65■■□□□ 1.38
R3HDM4-206ENST00000590454 CEP57L1Q8IYX8 460 aa23.65■■□□□ 1.38
R3HDM4-206ENST00000590454 MYCT1Q8N699 235 aa23.65■■□□□ 1.38
R3HDM4-206ENST00000590454 DEPTORQ8TB45 409 aa23.65■■□□□ 1.38
R3HDM4-206ENST00000590454 PYM1Q9BRP8 204 aaKnown RBP23.65■■□□□ 1.38
R3HDM4-206ENST00000590454 NFKBIZQ9BYH8 718 aa23.65■■□□□ 1.38
R3HDM4-206ENST00000590454 INO80BQ9C086 356 aaPredicted RBP23.65■■□□□ 1.38
R3HDM4-206ENST00000590454 CCDC113Q9H0I3 377 aa23.65■■□□□ 1.38
R3HDM4-206ENST00000590454 ZNF318Q5VUA4 2279 aa23.64■■□□□ 1.38
R3HDM4-206ENST00000590454 B4GALT5O43286 388 aa23.64■■□□□ 1.37
R3HDM4-206ENST00000590454 TBCAO75347 108 aaKnown RBP23.64■■□□□ 1.37
R3HDM4-206ENST00000590454 FAM160A1Q05DH4 1040 aa23.64■■□□□ 1.37
R3HDM4-206ENST00000590454 DSC3Q14574 896 aa23.64■■□□□ 1.37
R3HDM4-206ENST00000590454 PPP2R5AQ15172 486 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms