RNA–Protein interactions for RNA: ENST00000590388.5

TUBB6-208, Transcript of tubulin beta 6 class V, human

TSL 4

Gene TUBB6, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBB6-208	ENST00000590388	TBC1D13	Q9NVG8	400 aa		13.75	□□□□□ -0.21
TUBB6-208	ENST00000590388	TFIP11	Q9UBB9	837 aa	Known RBP	13.75	□□□□□ -0.21
TUBB6-208	ENST00000590388	CCDC39	Q9UFE4	941 aa		13.75	□□□□□ -0.21
TUBB6-208	ENST00000590388	LZTS1	Q9Y250	596 aa		13.75	□□□□□ -0.21
TUBB6-208	ENST00000590388		K7ERI5	159 aa		13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	FGF18	O76093	207 aa		13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	ITGA4	P13612	1032 aa		13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	SCP2	P22307	547 aa		13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	DNAJB1	P25685	340 aa		13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	MCM6	Q14566	821 aa		13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	CCDC85B	Q15834	202 aa	Predicted RBP	13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	SPOUT1	Q5T280	376 aa	Known RBP	13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	NT5DC1	Q5TFE4	455 aa		13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	KCNT2	Q6UVM3	1135 aa		13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	CCDC73	Q6ZRK6	1079 aa		13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	TAS1R3	Q7RTX0	852 aa		13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	MICALL1	Q8N3F8	863 aa		13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	TMEM161B	Q8NDZ6	487 aa		13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	URGCP	Q8TCY9	931 aa		13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	KCNG4	Q8TDN1	519 aa		13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	PPM1E	Q8WY54	764 aa		13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	ZNF558	Q96NG5	402 aa		13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	REEP2	Q9BRK0	252 aa		13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	TRIM6	Q9C030	488 aa	Predicted RBP	13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	NXF3	Q9H4D5	531 aa	Known RBP	13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	NSUN3	Q9H649	340 aa	Known RBP	13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	ALG13	Q9NP73	1137 aa	Known RBP	13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	KMT5A	Q9NQR1	393 aa		13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	LARS	Q9P2J5	1176 aa	Known RBP	13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	KANSL3	Q9P2N6	904 aa		13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	CFAP45	Q9UL16	551 aa		13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	GIT1	Q9Y2X7	761 aa		13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	ZDHHC9	Q9Y397	364 aa		13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	TRIP11	Q15643	1979 aa		13.74	□□□□□ -0.21
TUBB6-208	ENST00000590388	CIT	O14578	2027 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	CCDC169	A6NNP5	214 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	SFI1	A8K8P3	1242 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388		H0YCG3	227 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	CUTA	O60888	179 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	NPTXR	O95502	500 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	SMTN	P53814	917 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	NCKAP1L	P55160	1127 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	BCAR1	P56945	870 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	RAD51AP2	Q09MP3	1159 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	GIT2	Q14161	759 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	DCAF4L1	Q3SXM0	396 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	LONRF3	Q496Y0	759 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	RRAGB	Q5VZM2	374 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	CDR2L	Q86X02	465 aa	Predicted RBP	13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	THNSL1	Q8IYQ7	743 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	SLC39A11	Q8N1S5	342 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	SLC17A8	Q8NDX2	589 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	POF1B	Q8WVV4	589 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	ADPGK	Q9BRR6	497 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	RNF39	Q9H2S5	420 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	NRDE2	Q9H7Z3	1164 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	THEG	Q9P2T0	379 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	COG5	Q9UP83	839 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	TNFSF13B	Q9Y275	285 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	INPP5F	Q9Y2H2	1132 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388	HES2	Q9Y543	173 aa		13.73	□□□□□ -0.21
TUBB6-208	ENST00000590388		A0A087X0B3	334 aa		13.72	□□□□□ -0.21
TUBB6-208	ENST00000590388	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.72	□□□□□ -0.21
TUBB6-208	ENST00000590388	ARL5C	A6NH57	179 aa		13.72	□□□□□ -0.21
TUBB6-208	ENST00000590388	MAPT	P10636	758 aa	Known RBP	13.72	□□□□□ -0.21
TUBB6-208	ENST00000590388	PROZ	P22891	400 aa		13.72	□□□□□ -0.21
TUBB6-208	ENST00000590388	ALDH7A1	P49419	539 aa	Known RBP	13.72	□□□□□ -0.21
TUBB6-208	ENST00000590388	AFF1	P51825	1210 aa	Known RBP	13.72	□□□□□ -0.21
TUBB6-208	ENST00000590388	DNM1	Q05193	864 aa	Known RBP	13.72	□□□□□ -0.21
TUBB6-208	ENST00000590388	DSC1	Q08554	894 aa		13.72	□□□□□ -0.21
TUBB6-208	ENST00000590388	ATF7IP2	Q5U623	682 aa		13.72	□□□□□ -0.21
TUBB6-208	ENST00000590388	EEF1DP3	Q658K8	133 aa		13.72	□□□□□ -0.21
TUBB6-208	ENST00000590388	PDE12	Q6L8Q7	609 aa	Known RBP	13.72	□□□□□ -0.21
TUBB6-208	ENST00000590388	GSTCD	Q8NEC7	633 aa		13.72	□□□□□ -0.21
TUBB6-208	ENST00000590388	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.72	□□□□□ -0.21
TUBB6-208	ENST00000590388	MRPS27	Q92552	414 aa	Known RBP	13.72	□□□□□ -0.21
TUBB6-208	ENST00000590388	ACO2	Q99798	780 aa	Known RBP	13.72	□□□□□ -0.21
TUBB6-208	ENST00000590388	MRPL4	Q9BYD3	311 aa	Known RBP	13.72	□□□□□ -0.21
TUBB6-208	ENST00000590388	PARVG	Q9HBI0	331 aa		13.72	□□□□□ -0.21
TUBB6-208	ENST00000590388	PTPRH	Q9HD43	1115 aa		13.72	□□□□□ -0.21
TUBB6-208	ENST00000590388	PRDM6	Q9NQX0	595 aa		13.72	□□□□□ -0.21
TUBB6-208	ENST00000590388	SPG21	Q9NZD8	308 aa		13.72	□□□□□ -0.21
TUBB6-208	ENST00000590388	PDCD11	Q14690	1871 aa	Known RBP	13.72	□□□□□ -0.21
TUBB6-208	ENST00000590388	VCAN	P13611	3396 aa		13.71	□□□□□ -0.21
TUBB6-208	ENST00000590388	ABLIM1	O14639	778 aa		13.71	□□□□□ -0.21
TUBB6-208	ENST00000590388	FSCN2	O14926	492 aa		13.71	□□□□□ -0.21
TUBB6-208	ENST00000590388	SLC16A4	O15374	487 aa		13.71	□□□□□ -0.21
TUBB6-208	ENST00000590388	B4GALT3	O60512	393 aa		13.71	□□□□□ -0.21
TUBB6-208	ENST00000590388	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
TUBB6-208	ENST00000590388	DDHD2	O94830	711 aa		13.71	□□□□□ -0.21
TUBB6-208	ENST00000590388	FAM13A	O94988	1023 aa		13.71	□□□□□ -0.21
TUBB6-208	ENST00000590388	GALT	P07902	379 aa		13.71	□□□□□ -0.21
TUBB6-208	ENST00000590388	PBX3	P40426	434 aa		13.71	□□□□□ -0.21
TUBB6-208	ENST00000590388	MLH1	P40692	756 aa		13.71	□□□□□ -0.21
TUBB6-208	ENST00000590388	STAT6	P42226	847 aa		13.71	□□□□□ -0.21
TUBB6-208	ENST00000590388	CACNB1	Q02641	598 aa	Predicted RBP	13.71	□□□□□ -0.21
TUBB6-208	ENST00000590388	RNASEL	Q05823	741 aa	Known RBP	13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms