RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 AKAP5P24588 427 aa13.33□□□□□ -0.28
TPM4-212ENST00000590180 MARCKSP29966 332 aaPredicted RBP13.33□□□□□ -0.28
TPM4-212ENST00000590180 CA8P35219 290 aa13.33□□□□□ -0.28
TPM4-212ENST00000590180 LONP1P36776 959 aaKnown RBP13.33□□□□□ -0.28
TPM4-212ENST00000590180 AFF1P51825 1210 aaKnown RBP13.33□□□□□ -0.28
TPM4-212ENST00000590180 EFNA5P52803 228 aa13.33□□□□□ -0.28
TPM4-212ENST00000590180 GRIN1Q05586 938 aa13.33□□□□□ -0.28
TPM4-212ENST00000590180 RAD51AP2Q09MP3 1159 aa13.33□□□□□ -0.28
TPM4-212ENST00000590180 DHX8Q14562 1220 aaKnown RBP13.33□□□□□ -0.28
TPM4-212ENST00000590180 BMS1Q14692 1282 aaKnown RBP13.33□□□□□ -0.28
TPM4-212ENST00000590180 FAM187BQ17R55 369 aa13.33□□□□□ -0.28
TPM4-212ENST00000590180 LEXMQ3ZCV2 418 aa13.33□□□□□ -0.28
TPM4-212ENST00000590180 HYIQ5T013 277 aa13.33□□□□□ -0.28
TPM4-212ENST00000590180 PLPP4Q5VZY2 271 aa13.33□□□□□ -0.28
TPM4-212ENST00000590180 CDCA2Q69YH5 1023 aaPredicted RBP13.33□□□□□ -0.28
TPM4-212ENST00000590180 PDE12Q6L8Q7 609 aaKnown RBP13.33□□□□□ -0.28
TPM4-212ENST00000590180 PPP4R3CPQ6ZMV5 832 aa13.33□□□□□ -0.28
TPM4-212ENST00000590180 ADGRD2Q7Z7M1 963 aa13.33□□□□□ -0.28
TPM4-212ENST00000590180 ZNF280BQ86YH2 543 aa13.33□□□□□ -0.28
TPM4-212ENST00000590180 KCTD17Q8N5Z5 321 aa13.33□□□□□ -0.28
TPM4-212ENST00000590180 SYT2Q8N9I0 419 aaPredicted RBP13.33□□□□□ -0.28
TPM4-212ENST00000590180 SPRYD3Q8NCJ5 442 aa13.33□□□□□ -0.28
TPM4-212ENST00000590180 DRC1Q96MC2 740 aa13.33□□□□□ -0.28
TPM4-212ENST00000590180 UHRF1Q96T88 793 aaPredicted RBP13.33□□□□□ -0.28
TPM4-212ENST00000590180 TCF25Q9BQ70 676 aa13.33□□□□□ -0.28
TPM4-212ENST00000590180 ZSCAN16Q9H4T2 348 aaPredicted RBP13.33□□□□□ -0.28
TPM4-212ENST00000590180 ENTPD7Q9NQZ7 604 aa13.33□□□□□ -0.28
TPM4-212ENST00000590180 DNAJB4Q9UDY4 337 aa13.33□□□□□ -0.28
TPM4-212ENST00000590180 FAN1Q9Y2M0 1017 aa13.33□□□□□ -0.28
TPM4-212ENST00000590180 TCF20Q9UGU0 1960 aaKnown RBP13.32□□□□□ -0.28
TPM4-212ENST00000590180 ARID2Q68CP9 1835 aa13.32□□□□□ -0.28
TPM4-212ENST00000590180 CARNS1A5YM72 827 aa13.32□□□□□ -0.28
TPM4-212ENST00000590180 ARL5CA6NH57 179 aa13.32□□□□□ -0.28
TPM4-212ENST00000590180 N4BP3O15049 544 aa13.32□□□□□ -0.28
TPM4-212ENST00000590180 LINC01565O15544 149 aa13.32□□□□□ -0.28
TPM4-212ENST00000590180 DDHD2O94830 711 aa13.32□□□□□ -0.28
TPM4-212ENST00000590180 CXCL14O95715 111 aa13.32□□□□□ -0.28
TPM4-212ENST00000590180 NPTX2P47972 431 aa13.32□□□□□ -0.28
TPM4-212ENST00000590180 SLC11A1P49279 550 aa13.32□□□□□ -0.28
TPM4-212ENST00000590180 DMP1Q13316 513 aaPredicted RBP13.32□□□□□ -0.28
TPM4-212ENST00000590180 ADAM15Q13444 863 aa13.32□□□□□ -0.28
TPM4-212ENST00000590180 CLUL1Q15846 466 aa13.32□□□□□ -0.28
TPM4-212ENST00000590180 FOXD4L5Q5VV16 416 aaPredicted RBP13.32□□□□□ -0.28
TPM4-212ENST00000590180 PTCRAQ6ISU1 281 aaPredicted RBP13.32□□□□□ -0.28
TPM4-212ENST00000590180 TMEM87AQ8NBN3 555 aa13.32□□□□□ -0.28
TPM4-212ENST00000590180 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.32□□□□□ -0.28
TPM4-212ENST00000590180 FOXD4L4Q8WXT5 416 aaPredicted RBP13.32□□□□□ -0.28
TPM4-212ENST00000590180 NECAB3Q96P71 396 aaPredicted RBP13.32□□□□□ -0.28
TPM4-212ENST00000590180 ADPGKQ9BRR6 497 aa13.32□□□□□ -0.28
TPM4-212ENST00000590180 NXF3Q9H4D5 531 aaKnown RBP13.32□□□□□ -0.28
TPM4-212ENST00000590180 NGRNQ9NPE2 291 aaKnown RBP13.32□□□□□ -0.28
TPM4-212ENST00000590180 KMT5AQ9NQR1 393 aa13.32□□□□□ -0.28
TPM4-212ENST00000590180 MIOSQ9NXC5 875 aa13.32□□□□□ -0.28
TPM4-212ENST00000590180 KLK14Q9P0G3 267 aa13.32□□□□□ -0.28
TPM4-212ENST00000590180 KCNG1Q9UIX4 513 aa13.32□□□□□ -0.28
TPM4-212ENST00000590180 GIT1Q9Y2X7 761 aa13.32□□□□□ -0.28
TPM4-212ENST00000590180 NPHP3-ACAD11A0A0J9YXS1 232 aa13.31□□□□□ -0.28
TPM4-212ENST00000590180 TTLL13PA6NNM8 815 aa13.31□□□□□ -0.28
TPM4-212ENST00000590180 FSCN2O14926 492 aa13.31□□□□□ -0.28
TPM4-212ENST00000590180 SLC26A4O43511 780 aa13.31□□□□□ -0.28
TPM4-212ENST00000590180 LTBRP36941 435 aa13.31□□□□□ -0.28
TPM4-212ENST00000590180 MLH1P40692 756 aa13.31□□□□□ -0.28
TPM4-212ENST00000590180 NDUFV1P49821 464 aa13.31□□□□□ -0.28
TPM4-212ENST00000590180 SCNN1GP51170 649 aa13.31□□□□□ -0.28
TPM4-212ENST00000590180 DLX2Q07687 328 aaPredicted RBP13.31□□□□□ -0.28
TPM4-212ENST00000590180 KARSQ15046 597 aaKnown RBP13.31□□□□□ -0.28
TPM4-212ENST00000590180 PTPAQ15257 358 aa13.31□□□□□ -0.28
TPM4-212ENST00000590180 CTC1Q2NKJ3 1217 aa13.31□□□□□ -0.28
TPM4-212ENST00000590180 TMEM119Q4V9L6 283 aa13.31□□□□□ -0.28
TPM4-212ENST00000590180 SPECC1Q5M775 1068 aa13.31□□□□□ -0.28
TPM4-212ENST00000590180 DAW1Q8N136 415 aa13.31□□□□□ -0.28
TPM4-212ENST00000590180 VPS52Q8N1B4 723 aa13.31□□□□□ -0.28
TPM4-212ENST00000590180 EFHBQ8N7U6 833 aa13.31□□□□□ -0.28
TPM4-212ENST00000590180 IGSF21Q96ID5 467 aa13.31□□□□□ -0.28
TPM4-212ENST00000590180 ZFP42Q96MM3 310 aa13.31□□□□□ -0.28
TPM4-212ENST00000590180 TIPINQ9BVW5 301 aa13.31□□□□□ -0.28
TPM4-212ENST00000590180 CCDC113Q9H0I3 377 aa13.31□□□□□ -0.28
TPM4-212ENST00000590180 PDZD7Q9H5P4 517 aa13.31□□□□□ -0.28
TPM4-212ENST00000590180 RBM19Q9Y4C8 960 aaKnown RBP13.31□□□□□ -0.28
TPM4-212ENST00000590180 EYSQ5T1H1 3165 aa13.31□□□□□ -0.28
TPM4-212ENST00000590180 HIDE1A8MVS5 230 aa13.3□□□□□ -0.28
TPM4-212ENST00000590180 SLC16A4O15374 487 aa13.3□□□□□ -0.28
TPM4-212ENST00000590180 NR1I2O75469 434 aa13.3□□□□□ -0.28
TPM4-212ENST00000590180 KRT18P05783 430 aaKnown RBP13.3□□□□□ -0.28
TPM4-212ENST00000590180 GUCY2CP25092 1073 aa13.3□□□□□ -0.28
TPM4-212ENST00000590180 OR1G1P47890 313 aa13.3□□□□□ -0.28
TPM4-212ENST00000590180 SMTNP53814 917 aa13.3□□□□□ -0.28
TPM4-212ENST00000590180 SLC12A3P55017 1021 aa13.3□□□□□ -0.28
TPM4-212ENST00000590180 CACNB1Q02641 598 aaPredicted RBP13.3□□□□□ -0.28
TPM4-212ENST00000590180 MCM6Q14566 821 aa13.3□□□□□ -0.28
TPM4-212ENST00000590180 COL19A1Q14993 1142 aa13.3□□□□□ -0.28
TPM4-212ENST00000590180 PUS10Q3MIT2 529 aaKnown RBP13.3□□□□□ -0.28
TPM4-212ENST00000590180 NT5DC1Q5TFE4 455 aa13.3□□□□□ -0.28
TPM4-212ENST00000590180 ATF7IP2Q5U623 682 aa13.3□□□□□ -0.28
TPM4-212ENST00000590180 EEF1DP3Q658K8 133 aa13.3□□□□□ -0.28
TPM4-212ENST00000590180 APBB1IPQ7Z5R6 666 aaPredicted RBP13.3□□□□□ -0.28
TPM4-212ENST00000590180 DDX53Q86TM3 631 aaKnown RBP13.3□□□□□ -0.28
TPM4-212ENST00000590180 EPSTI1Q96J88 318 aa13.3□□□□□ -0.28
TPM4-212ENST00000590180 CLIC6Q96NY7 704 aa13.3□□□□□ -0.28
TPM4-212ENST00000590180 USP28Q96RU2 1077 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms