RNA–Protein interactions for RNA: ENST00000589675.5

DDX39A-210, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-210ENST00000589675 TRAPPC10P48553 1259 aa12.38□□□□□ -0.43
DDX39A-210ENST00000589675 RBM25P49756 843 aaKnown RBP12.38□□□□□ -0.43
DDX39A-210ENST00000589675 AFF1P51825 1210 aaKnown RBP12.38□□□□□ -0.43
DDX39A-210ENST00000589675 TRIM67Q6ZTA4 783 aa12.38□□□□□ -0.43
DDX39A-210ENST00000589675 CATSPER3Q86XQ3 398 aa12.38□□□□□ -0.43
DDX39A-210ENST00000589675 COLGALT2Q8IYK4 626 aa12.38□□□□□ -0.43
DDX39A-210ENST00000589675 MCPH1Q8NEM0 835 aa12.38□□□□□ -0.43
DDX39A-210ENST00000589675 ASAP3Q8TDY4 903 aa12.38□□□□□ -0.43
DDX39A-210ENST00000589675 PIGOQ8TEQ8 1089 aa12.38□□□□□ -0.43
DDX39A-210ENST00000589675 PRIMPOLQ96LW4 560 aa12.38□□□□□ -0.43
DDX39A-210ENST00000589675 CCDC43Q96MW1 224 aaKnown RBP12.38□□□□□ -0.43
DDX39A-210ENST00000589675 FAM193BQ96PV7 902 aaPredicted RBP12.38□□□□□ -0.43
DDX39A-210ENST00000589675 KIF2CQ99661 725 aa12.38□□□□□ -0.43
DDX39A-210ENST00000589675 EIF2AQ9BY44 585 aaKnown RBP12.38□□□□□ -0.43
DDX39A-210ENST00000589675 GBP3Q9H0R5 595 aa12.38□□□□□ -0.43
DDX39A-210ENST00000589675 GIT1Q9Y2X7 761 aa12.38□□□□□ -0.43
DDX39A-210ENST00000589675 NR2E1Q9Y466 385 aa12.38□□□□□ -0.43
DDX39A-210ENST00000589675 MTCL1Q9Y4B5 1905 aaKnown RBP12.38□□□□□ -0.43
DDX39A-210ENST00000589675 A0A1B0GUA9 196 aa12.37□□□□□ -0.43
DDX39A-210ENST00000589675 NRP1O14786 923 aa12.37□□□□□ -0.43
DDX39A-210ENST00000589675 C1RP00736 705 aa12.37□□□□□ -0.43
DDX39A-210ENST00000589675 POMCP01189 267 aa12.37□□□□□ -0.43
DDX39A-210ENST00000589675 FOSBP53539 338 aa12.37□□□□□ -0.43
DDX39A-210ENST00000589675 DSC1Q08554 894 aa12.37□□□□□ -0.43
DDX39A-210ENST00000589675 PTPN14Q15678 1187 aa12.37□□□□□ -0.43
DDX39A-210ENST00000589675 FAM187BQ17R55 369 aa12.37□□□□□ -0.43
DDX39A-210ENST00000589675 SLC27A1Q6PCB7 646 aa12.37□□□□□ -0.43
DDX39A-210ENST00000589675 PPP4R3CPQ6ZMV5 832 aa12.37□□□□□ -0.43
DDX39A-210ENST00000589675 CCDC83Q8IWF9 413 aa12.37□□□□□ -0.43
DDX39A-210ENST00000589675 HACE1Q8IYU2 909 aa12.37□□□□□ -0.43
DDX39A-210ENST00000589675 RNF168Q8IYW5 571 aaPredicted RBP12.37□□□□□ -0.43
DDX39A-210ENST00000589675 TMEM87AQ8NBN3 555 aa12.37□□□□□ -0.43
DDX39A-210ENST00000589675 ERMNQ8TAM6 284 aa12.37□□□□□ -0.43
DDX39A-210ENST00000589675 AUTS2Q8WXX7 1259 aa12.37□□□□□ -0.43
DDX39A-210ENST00000589675 CPB2Q96IY4 423 aa12.37□□□□□ -0.43
DDX39A-210ENST00000589675 RIPOR3Q96MK2 946 aa12.37□□□□□ -0.43
DDX39A-210ENST00000589675 EMILIN2Q9BXX0 1053 aa12.37□□□□□ -0.43
DDX39A-210ENST00000589675 POLR3FQ9H1D9 316 aaPredicted RBP12.37□□□□□ -0.43
DDX39A-210ENST00000589675 RNF39Q9H2S5 420 aa12.37□□□□□ -0.43
DDX39A-210ENST00000589675 SSX2IPQ9Y2D8 614 aa12.37□□□□□ -0.43
DDX39A-210ENST00000589675 DENND4AQ7Z401 1863 aa12.36□□□□□ -0.43
DDX39A-210ENST00000589675 TMEM221A6NGB7 291 aa12.36□□□□□ -0.43
DDX39A-210ENST00000589675 M0R296 226 aa12.36□□□□□ -0.43
DDX39A-210ENST00000589675 USO1O60763 962 aaKnown RBP12.36□□□□□ -0.43
DDX39A-210ENST00000589675 MED24O75448 989 aa12.36□□□□□ -0.43
DDX39A-210ENST00000589675 SOD2P04179 222 aa12.36□□□□□ -0.43
DDX39A-210ENST00000589675 OR52Z1P0C646 297 aa12.36□□□□□ -0.43
DDX39A-210ENST00000589675 U2AF2P26368 475 aaKnown RBP eCLIP12.36□□□□□ -0.434e-9■□□□□ 9.1
DDX39A-210ENST00000589675 FXR2P51116 673 aaKnown RBP eCLIP12.36□□□□□ -0.43
DDX39A-210ENST00000589675 CLCN4P51793 760 aa12.36□□□□□ -0.43
DDX39A-210ENST00000589675 GUCY1B3Q02153 619 aa12.36□□□□□ -0.43
DDX39A-210ENST00000589675 SIGLEC14Q08ET2 396 aa12.36□□□□□ -0.43
DDX39A-210ENST00000589675 PDIA5Q14554 519 aa12.36□□□□□ -0.43
DDX39A-210ENST00000589675 PTPN21Q16825 1174 aa12.36□□□□□ -0.43
DDX39A-210ENST00000589675 ATAT1Q5SQI0 421 aa12.36□□□□□ -0.43
DDX39A-210ENST00000589675 CDCA2Q69YH5 1023 aaPredicted RBP12.36□□□□□ -0.43
DDX39A-210ENST00000589675 KIAA1841Q6NSI8 718 aa12.36□□□□□ -0.43
DDX39A-210ENST00000589675 NOSTRINQ8IVI9 506 aa12.36□□□□□ -0.43
DDX39A-210ENST00000589675 GPR65Q8IYL9 337 aa12.36□□□□□ -0.43
DDX39A-210ENST00000589675 C4orf32Q8N8J7 132 aa12.36□□□□□ -0.43
DDX39A-210ENST00000589675 KLHL5Q96PQ7 755 aa12.36□□□□□ -0.43
DDX39A-210ENST00000589675 GAD1Q99259 594 aa12.36□□□□□ -0.43
DDX39A-210ENST00000589675 APOL5Q9BWW9 433 aa12.36□□□□□ -0.43
DDX39A-210ENST00000589675 TRIM6Q9C030 488 aaPredicted RBP12.36□□□□□ -0.43
DDX39A-210ENST00000589675 FZD8Q9H461 694 aa12.36□□□□□ -0.43
DDX39A-210ENST00000589675 POMKQ9H5K3 350 aa12.36□□□□□ -0.43
DDX39A-210ENST00000589675 MRPL17Q9NRX2 175 aaKnown RBP12.36□□□□□ -0.43
DDX39A-210ENST00000589675 PRMT7Q9NVM4 692 aaPredicted RBP12.36□□□□□ -0.43
DDX39A-210ENST00000589675 USTQ9Y2C2 406 aa12.36□□□□□ -0.43
DDX39A-210ENST00000589675 STK24Q9Y6E0 443 aa12.36□□□□□ -0.43
DDX39A-210ENST00000589675 NR1I2O75469 434 aa12.35□□□□□ -0.43
DDX39A-210ENST00000589675 CNPP09543 421 aaKnown RBP12.35□□□□□ -0.43
DDX39A-210ENST00000589675 EPCAMP16422 314 aa12.35□□□□□ -0.43
DDX39A-210ENST00000589675 CYP11B2P19099 503 aa12.35□□□□□ -0.43
DDX39A-210ENST00000589675 ATP2B1P20020 1258 aa12.35□□□□□ -0.43
DDX39A-210ENST00000589675 CA8P35219 290 aa12.35□□□□□ -0.43
DDX39A-210ENST00000589675 MLH1P40692 756 aa12.35□□□□□ -0.43
DDX39A-210ENST00000589675 ZNF174Q15697 407 aa12.35□□□□□ -0.43
DDX39A-210ENST00000589675 TTC38Q5R3I4 469 aa12.35□□□□□ -0.43
DDX39A-210ENST00000589675 CABP7Q86V35 215 aa12.35□□□□□ -0.43
DDX39A-210ENST00000589675 GSTCDQ8NEC7 633 aa12.35□□□□□ -0.43
DDX39A-210ENST00000589675 FBXL18Q96ME1 805 aa12.35□□□□□ -0.43
DDX39A-210ENST00000589675 ZFP42Q96MM3 310 aa12.35□□□□□ -0.43
DDX39A-210ENST00000589675 RPS6KC1Q96S38 1066 aa12.35□□□□□ -0.43
DDX39A-210ENST00000589675 HERC2P3Q9BVR0 1158 aa12.35□□□□□ -0.43
DDX39A-210ENST00000589675 C2orf40Q9H1Z8 148 aa12.35□□□□□ -0.43
DDX39A-210ENST00000589675 SFXN1Q9H9B4 322 aa12.35□□□□□ -0.43
DDX39A-210ENST00000589675 MARCH5Q9NX47 278 aa12.35□□□□□ -0.43
DDX39A-210ENST00000589675 MIOSQ9NXC5 875 aa12.35□□□□□ -0.43
DDX39A-210ENST00000589675 HES2Q9Y543 173 aa12.35□□□□□ -0.43
DDX39A-210ENST00000589675 C2orf16Q68DN1 1984 aa12.35□□□□□ -0.43
DDX39A-210ENST00000589675 CACNA1HO95180 2353 aa12.34□□□□□ -0.43
DDX39A-210ENST00000589675 A0A087WWV3 80 aa12.34□□□□□ -0.43
DDX39A-210ENST00000589675 LRRIQ4A6NIV6 560 aa12.34□□□□□ -0.43
DDX39A-210ENST00000589675 B4GALT5O43286 388 aa12.34□□□□□ -0.43
DDX39A-210ENST00000589675 PAPLNO95428 1278 aa12.34□□□□□ -0.43
DDX39A-210ENST00000589675 KLRC2P26717 231 aa12.34□□□□□ -0.43
DDX39A-210ENST00000589675 OR1G1P47890 313 aa12.34□□□□□ -0.43
DDX39A-210ENST00000589675 SCNN1GP51170 649 aa12.34□□□□□ -0.43
DDX39A-210ENST00000589675 C8orf34Q49A92 452 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms