RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 SPOUT1Q5T280 376 aaKnown RBP19.35■□□□□ 0.69
H3F3B-207ENST00000589417 NT5DC1Q5TFE4 455 aa19.35■□□□□ 0.69
H3F3B-207ENST00000589417 TAS1R3Q7RTX0 852 aa19.35■□□□□ 0.69
H3F3B-207ENST00000589417 GPBP1Q86WP2 473 aa19.35■□□□□ 0.69
H3F3B-207ENST00000589417 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.35■□□□□ 0.69
H3F3B-207ENST00000589417 SLC17A8Q8NDX2 589 aa19.35■□□□□ 0.69
H3F3B-207ENST00000589417 TMEM161BQ8NDZ6 487 aa19.35■□□□□ 0.69
H3F3B-207ENST00000589417 KCNG4Q8TDN1 519 aa19.35■□□□□ 0.69
H3F3B-207ENST00000589417 ZNF558Q96NG5 402 aa19.35■□□□□ 0.69
H3F3B-207ENST00000589417 RNF39Q9H2S5 420 aa19.35■□□□□ 0.69
H3F3B-207ENST00000589417 ALG13Q9NP73 1137 aaKnown RBP19.35■□□□□ 0.69
H3F3B-207ENST00000589417 KMT5AQ9NQR1 393 aa19.35■□□□□ 0.69
H3F3B-207ENST00000589417 RCOR1Q9UKL0 485 aa19.35■□□□□ 0.69
H3F3B-207ENST00000589417 COG5Q9UP83 839 aa19.35■□□□□ 0.69
H3F3B-207ENST00000589417 TNFSF13BQ9Y275 285 aa19.35■□□□□ 0.69
H3F3B-207ENST00000589417 CCDC169A6NNP5 214 aa19.34■□□□□ 0.69
H3F3B-207ENST00000589417 DNAJB1P25685 340 aa19.34■□□□□ 0.69
H3F3B-207ENST00000589417 GIT2Q14161 759 aa19.34■□□□□ 0.69
H3F3B-207ENST00000589417 AXDND1Q5T1B0 1012 aaPredicted RBP19.34■□□□□ 0.69
H3F3B-207ENST00000589417 RRAGBQ5VZM2 374 aa19.34■□□□□ 0.69
H3F3B-207ENST00000589417 PDE12Q6L8Q7 609 aaKnown RBP19.34■□□□□ 0.69
H3F3B-207ENST00000589417 CCDC73Q6ZRK6 1079 aa19.34■□□□□ 0.69
H3F3B-207ENST00000589417 SLC39A11Q8N1S5 342 aa19.34■□□□□ 0.69
H3F3B-207ENST00000589417 RASSF8Q8NHQ8 419 aa19.34■□□□□ 0.69
H3F3B-207ENST00000589417 URGCPQ8TCY9 931 aa19.34■□□□□ 0.69
H3F3B-207ENST00000589417 POF1BQ8WVV4 589 aa19.34■□□□□ 0.69
H3F3B-207ENST00000589417 ATXN2LQ8WWM7 1075 aaKnown RBP19.34■□□□□ 0.69
H3F3B-207ENST00000589417 PPM1EQ8WY54 764 aa19.34■□□□□ 0.69
H3F3B-207ENST00000589417 REEP2Q9BRK0 252 aa19.34■□□□□ 0.69
H3F3B-207ENST00000589417 TRIM6Q9C030 488 aaPredicted RBP19.34■□□□□ 0.69
H3F3B-207ENST00000589417 NSUN3Q9H649 340 aaKnown RBP19.34■□□□□ 0.69
H3F3B-207ENST00000589417 NRDE2Q9H7Z3 1164 aa19.34■□□□□ 0.69
H3F3B-207ENST00000589417 PTPRHQ9HD43 1115 aa19.34■□□□□ 0.69
H3F3B-207ENST00000589417 UNC80Q8N2C7 3258 aa19.34■□□□□ 0.69
H3F3B-207ENST00000589417 COL4A4P53420 1690 aaPredicted RBP19.33■□□□□ 0.69
H3F3B-207ENST00000589417 H0YCG3 227 aa19.33■□□□□ 0.68
H3F3B-207ENST00000589417 CUTAO60888 179 aa19.33■□□□□ 0.68
H3F3B-207ENST00000589417 ALDH7A1P49419 539 aaKnown RBP19.33■□□□□ 0.68
H3F3B-207ENST00000589417 NCKAP1LP55160 1127 aa19.33■□□□□ 0.68
H3F3B-207ENST00000589417 DCAF4L1Q3SXM0 396 aa19.33■□□□□ 0.68
H3F3B-207ENST00000589417 LONRF3Q496Y0 759 aa19.33■□□□□ 0.68
H3F3B-207ENST00000589417 FOXD4L5Q5VV16 416 aaPredicted RBP19.33■□□□□ 0.68
H3F3B-207ENST00000589417 MICALL1Q8N3F8 863 aa19.33■□□□□ 0.68
H3F3B-207ENST00000589417 GSTCDQ8NEC7 633 aa19.33■□□□□ 0.68
H3F3B-207ENST00000589417 FOXD4L4Q8WXT5 416 aaPredicted RBP19.33■□□□□ 0.68
H3F3B-207ENST00000589417 MRPS27Q92552 414 aaKnown RBP19.33■□□□□ 0.68
H3F3B-207ENST00000589417 ACO2Q99798 780 aaKnown RBP19.33■□□□□ 0.68
H3F3B-207ENST00000589417 TMEM175Q9BSA9 504 aa19.33■□□□□ 0.68
H3F3B-207ENST00000589417 NXF3Q9H4D5 531 aaKnown RBP19.33■□□□□ 0.68
H3F3B-207ENST00000589417 SPG21Q9NZD8 308 aa19.33■□□□□ 0.68
H3F3B-207ENST00000589417 HES2Q9Y543 173 aa19.33■□□□□ 0.68
H3F3B-207ENST00000589417 SPTBN5Q9NRC6 3674 aaKnown RBP19.33■□□□□ 0.68
H3F3B-207ENST00000589417 REV3LO60673 3130 aa19.32■□□□□ 0.68
H3F3B-207ENST00000589417 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.32■□□□□ 0.68
H3F3B-207ENST00000589417 NPHP3-ACAD11A0A0J9YXS1 232 aa19.32■□□□□ 0.68
H3F3B-207ENST00000589417 ARL5CA6NH57 179 aa19.32■□□□□ 0.68
H3F3B-207ENST00000589417 NCK2O43639 380 aa19.32■□□□□ 0.68
H3F3B-207ENST00000589417 NPTXRO95502 500 aa19.32■□□□□ 0.68
H3F3B-207ENST00000589417 GALTP07902 379 aa19.32■□□□□ 0.68
H3F3B-207ENST00000589417 MAPTP10636 758 aaKnown RBP19.32■□□□□ 0.68
H3F3B-207ENST00000589417 PROZP22891 400 aa19.32■□□□□ 0.68
H3F3B-207ENST00000589417 AFF1P51825 1210 aaKnown RBP19.32■□□□□ 0.68
H3F3B-207ENST00000589417 BCAR1P56945 870 aa19.32■□□□□ 0.68
H3F3B-207ENST00000589417 RAD51AP2Q09MP3 1159 aa19.32■□□□□ 0.68
H3F3B-207ENST00000589417 ATF7IP2Q5U623 682 aa19.32■□□□□ 0.68
H3F3B-207ENST00000589417 EEF1DP3Q658K8 133 aa19.32■□□□□ 0.68
H3F3B-207ENST00000589417 CDR2LQ86X02 465 aaPredicted RBP19.32■□□□□ 0.68
H3F3B-207ENST00000589417 THNSL1Q8IYQ7 743 aa19.32■□□□□ 0.68
H3F3B-207ENST00000589417 ADPGKQ9BRR6 497 aa19.32■□□□□ 0.68
H3F3B-207ENST00000589417 MRPL4Q9BYD3 311 aaKnown RBP19.32■□□□□ 0.68
H3F3B-207ENST00000589417 PARVGQ9HBI0 331 aa19.32■□□□□ 0.68
H3F3B-207ENST00000589417 PRDM6Q9NQX0 595 aa19.32■□□□□ 0.68
H3F3B-207ENST00000589417 THEGQ9P2T0 379 aa19.32■□□□□ 0.68
H3F3B-207ENST00000589417 PUF60Q9UHX1 559 aaKnown RBP19.32■□□□□ 0.68
H3F3B-207ENST00000589417 NLRC5Q86WI3 1866 aa19.32■□□□□ 0.68
H3F3B-207ENST00000589417 A0A087X0B3 334 aa19.31■□□□□ 0.68
H3F3B-207ENST00000589417 FSCN2O14926 492 aa19.31■□□□□ 0.68
H3F3B-207ENST00000589417 SLC16A4O15374 487 aa19.31■□□□□ 0.68
H3F3B-207ENST00000589417 ABCD1P33897 745 aa19.31■□□□□ 0.68
H3F3B-207ENST00000589417 KRT17Q04695 432 aa19.31■□□□□ 0.68
H3F3B-207ENST00000589417 DNM1Q05193 864 aaKnown RBP19.31■□□□□ 0.68
H3F3B-207ENST00000589417 DSC1Q08554 894 aa19.31■□□□□ 0.68
H3F3B-207ENST00000589417 SHC4Q6S5L8 630 aa19.31■□□□□ 0.68
H3F3B-207ENST00000589417 ZPBP2Q6X784 338 aa19.31■□□□□ 0.68
H3F3B-207ENST00000589417 SV2BQ7L1I2 683 aa19.31■□□□□ 0.68
H3F3B-207ENST00000589417 APBB1IPQ7Z5R6 666 aaPredicted RBP19.31■□□□□ 0.68
H3F3B-207ENST00000589417 ZNF280BQ86YH2 543 aa19.31■□□□□ 0.68
H3F3B-207ENST00000589417 FIZ1Q96SL8 496 aa19.31■□□□□ 0.68
H3F3B-207ENST00000589417 GAD1Q99259 594 aa19.31■□□□□ 0.68
H3F3B-207ENST00000589417 ST6GALNAC4Q9H4F1 302 aa19.31■□□□□ 0.68
H3F3B-207ENST00000589417 INPP5FQ9Y2H2 1132 aa19.31■□□□□ 0.68
H3F3B-207ENST00000589417 USP20Q9Y2K6 914 aa19.31■□□□□ 0.68
H3F3B-207ENST00000589417 ABLIM1O14639 778 aa19.3■□□□□ 0.68
H3F3B-207ENST00000589417 DDHD2O94830 711 aa19.3■□□□□ 0.68
H3F3B-207ENST00000589417 RNASELQ05823 741 aaKnown RBP19.3■□□□□ 0.68
H3F3B-207ENST00000589417 DHX8Q14562 1220 aaKnown RBP19.3■□□□□ 0.68
H3F3B-207ENST00000589417 E2F4Q16254 413 aa19.3■□□□□ 0.68
H3F3B-207ENST00000589417 TCEAL5Q5H9L2 206 aa19.3■□□□□ 0.68
H3F3B-207ENST00000589417 COLGALT2Q8IYK4 626 aa19.3■□□□□ 0.68
H3F3B-207ENST00000589417 HLA-CQ95604 372 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms