RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	PLAGL2	Q9UPG8	496 aa		16.74	■□□□□ 0.27
DDX39A-209	ENST00000589318	EVPL	Q92817	2033 aa		16.74	■□□□□ 0.27
DDX39A-209	ENST00000589318		H3BQF6	201 aa		16.74	■□□□□ 0.27
DDX39A-209	ENST00000589318	LGALS2	P05162	132 aa		16.74	■□□□□ 0.27
DDX39A-209	ENST00000589318	TM4SF4	P48230	202 aa		16.74	■□□□□ 0.27
DDX39A-209	ENST00000589318	MCCD1	P59942	119 aa	Predicted RBP	16.74	■□□□□ 0.27
DDX39A-209	ENST00000589318	SREBF2	Q12772	1141 aa		16.74	■□□□□ 0.27
DDX39A-209	ENST00000589318	BFSP1	Q12934	665 aa		16.74	■□□□□ 0.27
DDX39A-209	ENST00000589318	PPP2R5A	Q15172	486 aa		16.74	■□□□□ 0.27
DDX39A-209	ENST00000589318	DUSP28	Q4G0W2	176 aa		16.74	■□□□□ 0.27
DDX39A-209	ENST00000589318	XXYLT1	Q8NBI6	393 aa		16.74	■□□□□ 0.27
DDX39A-209	ENST00000589318	RDH13	Q8NBN7	331 aa		16.74	■□□□□ 0.27
DDX39A-209	ENST00000589318	RNPEP	Q9H4A4	650 aa		16.74	■□□□□ 0.27
DDX39A-209	ENST00000589318	CEP72	Q9P209	647 aa		16.74	■□□□□ 0.27
DDX39A-209	ENST00000589318	VPS18	Q9P253	973 aa		16.74	■□□□□ 0.27
DDX39A-209	ENST00000589318	ABT1	Q9ULW3	272 aa	Known RBP	16.74	■□□□□ 0.27
DDX39A-209	ENST00000589318	ZSWIM8	A7E2V4	1837 aa		16.73	■□□□□ 0.27
DDX39A-209	ENST00000589318	GTPBP10	A4D1E9	387 aa	Known RBP	16.73	■□□□□ 0.27
DDX39A-209	ENST00000589318		H0YCG3	227 aa		16.73	■□□□□ 0.27
DDX39A-209	ENST00000589318	MAPK13	O15264	365 aa		16.73	■□□□□ 0.27
DDX39A-209	ENST00000589318	PPFIA4	O75335	1185 aa		16.73	■□□□□ 0.27
DDX39A-209	ENST00000589318	CCDC172	P0C7W6	258 aa		16.73	■□□□□ 0.27
DDX39A-209	ENST00000589318	HOXD8	P13378	290 aa	Predicted RBP	16.73	■□□□□ 0.27
DDX39A-209	ENST00000589318	SLC9A1	P19634	815 aa		16.73	■□□□□ 0.27
DDX39A-209	ENST00000589318	PON1	P27169	355 aa		16.73	■□□□□ 0.27
DDX39A-209	ENST00000589318	CAPS	Q13938	189 aa		16.73	■□□□□ 0.27
DDX39A-209	ENST00000589318	MSANTD4	Q8NCY6	345 aa		16.73	■□□□□ 0.27
DDX39A-209	ENST00000589318	ZFYVE28	Q9HCC9	887 aa		16.73	■□□□□ 0.27
DDX39A-209	ENST00000589318	PLCB1	Q9NQ66	1216 aa		16.73	■□□□□ 0.27
DDX39A-209	ENST00000589318	SLC5A4	Q9NY91	659 aa		16.73	■□□□□ 0.27
DDX39A-209	ENST00000589318	ERAP1	Q9NZ08	941 aa		16.73	■□□□□ 0.27
DDX39A-209	ENST00000589318	KCNG1	Q9UIX4	513 aa		16.73	■□□□□ 0.27
DDX39A-209	ENST00000589318	GJD2	Q9UKL4	321 aa		16.73	■□□□□ 0.27
DDX39A-209	ENST00000589318	TMEM88B	A6NKF7	163 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	HBP1	O60381	514 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	IGHA2	P01877	340 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	TRIM49	P0CI25	452 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	TRIM49C	P0CI26	452 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	CTGF	P29279	349 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	CDK17	Q00537	523 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	EXOC3L4	Q17RC7	722 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	BRDT	Q58F21	947 aa	Predicted RBP	16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	PDXDC1	Q6P996	788 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	PLEKHO2	Q8TD55	490 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	TRAPPC12	Q8WVT3	735 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	C16orf70	Q9BSU1	422 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	SIX2	Q9NPC8	291 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	CEP83	Q9Y592	693 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	LRRC53	A6NM62	1247 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	GAS2	O43903	313 aa	Known RBP	16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	EDN1	P05305	212 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	ADRB2	P07550	413 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	ACTN1	P12814	892 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	ABCD1	P33897	745 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	FMO5	P49326	533 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	DLG4	P78352	724 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	CCL14	Q16627	93 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	CBWD6	Q4V339	395 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	CBWD3	Q5JTY5	395 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	CBWD5	Q5RIA9	395 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	BEND6	Q5SZJ8	279 aa	Predicted RBP	16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	C1orf220	Q5T0J3	134 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	IQSEC1	Q6DN90	963 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	INTS8	Q75QN2	995 aa	Known RBP	16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	RRAGA	Q7L523	313 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	SRGAP1	Q7Z6B7	1085 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	PRPF31	Q8WWY3	499 aa	Known RBP	16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	FBXL18	Q96ME1	805 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	TRPC6	Q9Y210	931 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318	PCNT	O95613	3336 aa		16.72	■□□□□ 0.27
DDX39A-209	ENST00000589318		A0A0U1RQJ8	604 aa		16.71	■□□□□ 0.27
DDX39A-209	ENST00000589318	LRRIQ4	A6NIV6	560 aa		16.71	■□□□□ 0.27
DDX39A-209	ENST00000589318	HNRNPDL	O14979	420 aa	Known RBP	16.71	■□□□□ 0.27
DDX39A-209	ENST00000589318	PIGR	P01833	764 aa		16.71	■□□□□ 0.27
DDX39A-209	ENST00000589318	SCP2	P22307	547 aa		16.71	■□□□□ 0.27
DDX39A-209	ENST00000589318	POLR2F	P61218	127 aa	Known RBP	16.71	■□□□□ 0.27
DDX39A-209	ENST00000589318	GNG11	P61952	73 aa		16.71	■□□□□ 0.27
DDX39A-209	ENST00000589318	IRF5	Q13568	498 aa		16.71	■□□□□ 0.27
DDX39A-209	ENST00000589318	TSR1	Q2NL82	804 aa	Known RBP	16.71	■□□□□ 0.27
DDX39A-209	ENST00000589318	DNAJC21	Q5F1R6	531 aa	Known RBP	16.71	■□□□□ 0.27
DDX39A-209	ENST00000589318	PRAMEF19	Q5SWL8	479 aa		16.71	■□□□□ 0.27
DDX39A-209	ENST00000589318	IER5	Q5VY09	327 aa		16.71	■□□□□ 0.27
DDX39A-209	ENST00000589318	GBP6	Q6ZN66	633 aa		16.71	■□□□□ 0.27
DDX39A-209	ENST00000589318	TADA2B	Q86TJ2	420 aa		16.71	■□□□□ 0.27
DDX39A-209	ENST00000589318	CBWD2	Q8IUF1	395 aa		16.71	■□□□□ 0.27
DDX39A-209	ENST00000589318	LRRC71	Q8N4P6	559 aa		16.71	■□□□□ 0.27
DDX39A-209	ENST00000589318	ACRBP	Q8NEB7	543 aa		16.71	■□□□□ 0.27
DDX39A-209	ENST00000589318	ATRIP	Q8WXE1	791 aa		16.71	■□□□□ 0.27
DDX39A-209	ENST00000589318	NLRC4	Q9NPP4	1024 aa		16.71	■□□□□ 0.27
DDX39A-209	ENST00000589318	REXO2	Q9Y3B8	237 aa	Known RBP	16.71	■□□□□ 0.27
DDX39A-209	ENST00000589318	GOLGA8IP	A6NC78	632 aa		16.7	■□□□□ 0.26
DDX39A-209	ENST00000589318	GOLGA8J	A6NMD2	632 aa		16.7	■□□□□ 0.26
DDX39A-209	ENST00000589318	CA12	O43570	354 aa		16.7	■□□□□ 0.26
DDX39A-209	ENST00000589318	ADCY3	O60266	1144 aa		16.7	■□□□□ 0.26
DDX39A-209	ENST00000589318	NDUFA10	O95299	355 aa		16.7	■□□□□ 0.26
DDX39A-209	ENST00000589318	MMP3	P08254	477 aa		16.7	■□□□□ 0.26
DDX39A-209	ENST00000589318	CCDC175	P0C221	793 aa		16.7	■□□□□ 0.26
DDX39A-209	ENST00000589318	ZNF286B	P0CG31	522 aa		16.7	■□□□□ 0.26
DDX39A-209	ENST00000589318	ZNF865	P0CJ78	1059 aa	Predicted RBP	16.7	■□□□□ 0.26
DDX39A-209	ENST00000589318	GART	P22102	1010 aa		16.7	■□□□□ 0.26

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms