RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 DR1Q01658 176 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 SLC20A2Q08357 652 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 KCNA1Q09470 495 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 IFFO1Q0D2I5 559 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 PRPF4BQ13523 1007 aaKnown RBP7.72□□□□□ -1.17
SPIDR-228ENST00000588781 PGM5Q15124 567 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 WDR44Q5JSH3 913 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 KIAA1755Q5JYT7 1200 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 CEP85LQ5SZL2 805 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 FAM102BQ5T8I3 360 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 TRIM72Q6ZMU5 477 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 SYDE1Q6ZW31 735 aaPredicted RBP7.72□□□□□ -1.17
SPIDR-228ENST00000588781 MAP4K3Q8IVH8 894 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 FAM71AQ8IYT1 594 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 RPUSD2Q8IZ73 545 aaKnown RBP7.72□□□□□ -1.17
SPIDR-228ENST00000588781 DAW1Q8N136 415 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 TSEN2Q8NCE0 465 aaKnown RBP7.72□□□□□ -1.17
SPIDR-228ENST00000588781 SEC14L1Q92503 715 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 RNPC3Q96LT9 517 aaKnown RBP7.72□□□□□ -1.17
SPIDR-228ENST00000588781 AGBL1Q96MI9 1066 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 RMDN3Q96TC7 470 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 FMO2Q99518 471 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 MOV10L1Q9BXT6 1211 aaKnown RBP7.72□□□□□ -1.17
SPIDR-228ENST00000588781 TMEM39BQ9GZU3 492 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 TMBIM4Q9HC24 238 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 KMT5AQ9NQR1 393 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 PXMP2Q9NR77 195 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 PICK1Q9NRD5 415 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 HOMER3Q9NSC5 361 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 RSPH14Q9UHP6 348 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 FEZ2Q9UHY8 353 aaPredicted RBP7.72□□□□□ -1.17
SPIDR-228ENST00000588781 GTF3C4Q9UKN8 822 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 TBX20Q9UMR3 447 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 PACSIN2Q9UNF0 486 aaPredicted RBP7.72□□□□□ -1.17
SPIDR-228ENST00000588781 PPME1Q9Y570 386 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 PCDHA10Q9Y5I2 948 aa7.72□□□□□ -1.17
SPIDR-228ENST00000588781 A0A087WUV0 522 aaPredicted RBP7.71□□□□□ -1.18
SPIDR-228ENST00000588781 CCDC169A6NNP5 214 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 MYO1CO00159 1063 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 FOXN3O00409 490 aaPredicted RBP7.71□□□□□ -1.18
SPIDR-228ENST00000588781 NFIBO00712 420 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 NDUFAB1O14561 156 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 DDX3YO15523 660 aaKnown RBP7.71□□□□□ -1.18
SPIDR-228ENST00000588781 LDHAP00338 332 aaKnown RBP7.71□□□□□ -1.18
SPIDR-228ENST00000588781 FTLP02792 175 aaPredicted RBP7.71□□□□□ -1.18
SPIDR-228ENST00000588781 MYCLP12524 364 aaPredicted RBP7.71□□□□□ -1.18
SPIDR-228ENST00000588781 ABCB4P21439 1286 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 INPP5BP32019 993 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 HSD17B3P37058 310 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 USP8P40818 1118 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 SLC1A1P43005 524 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 FNTAP49354 379 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 PEX3P56589 373 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 CORO7P57737 925 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 ZNF280AP59817 542 aaPredicted RBP7.71□□□□□ -1.18
SPIDR-228ENST00000588781 RNASE9P60153 205 aaKnown RBP7.71□□□□□ -1.18
SPIDR-228ENST00000588781 TGFB2P61812 414 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 ERVK-9P63128 1117 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 COG2Q14746 738 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 SLMAPQ14BN4 828 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 BRDTQ58F21 947 aaPredicted RBP7.71□□□□□ -1.18
SPIDR-228ENST00000588781 ODF2Q5BJF6 829 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 TTMPQ5BVD1 217 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 LIN9Q5TKA1 542 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 SLFN12LQ6IEE8 588 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 PHLDB3Q6NSJ2 640 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 MIS18BP1Q6P0N0 1132 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 GJB7Q6PEY0 223 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 MIGA2Q7L4E1 593 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 CYFIP1Q7L576 1253 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 EXOC8Q8IYI6 725 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 CPXCR1Q8N123 301 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 GPD1LQ8N335 351 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 RDH13Q8NBN7 331 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 FBXL13Q8NEE6 735 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 LMO3Q8TAP4 145 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 BCAS4Q8TDM0 211 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 NSUN6Q8TEA1 469 aaKnown RBP7.71□□□□□ -1.18
SPIDR-228ENST00000588781 GRK7Q8WTQ7 553 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 UBLCP1Q8WVY7 318 aaPredicted RBP7.71□□□□□ -1.18
SPIDR-228ENST00000588781 BBXQ8WY36 941 aaPredicted RBP7.71□□□□□ -1.18
SPIDR-228ENST00000588781 RIN2Q8WYP3 895 aaPredicted RBP7.71□□□□□ -1.18
SPIDR-228ENST00000588781 SHC3Q92529 594 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 KCNN1Q92952 543 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 TRERF1Q96PN7 1200 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 ZSWIM1Q9BR11 485 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 PDCD2LQ9BRP1 358 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 ERP44Q9BS26 406 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 NTPCRQ9BSD7 190 aaKnown RBP7.71□□□□□ -1.18
SPIDR-228ENST00000588781 GPR88Q9GZN0 384 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 EPN3Q9H201 632 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 PCIF1Q9H4Z3 704 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 ATP6V0A4Q9HBG4 840 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 RAVER2Q9HCJ3 691 aaKnown RBP7.71□□□□□ -1.18
SPIDR-228ENST00000588781 ZNF277Q9NRM2 450 aaPredicted RBP7.71□□□□□ -1.18
SPIDR-228ENST00000588781 C1orf112Q9NSG2 853 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 FBXO28Q9NVF7 368 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 PIM2Q9P1W9 311 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 AJAP1Q9UKB5 411 aaPredicted RBP7.71□□□□□ -1.18
SPIDR-228ENST00000588781 COQ4Q9Y3A0 265 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms