RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 IRF2BP1Q8IU81 584 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 SLC9A9Q8IVB4 645 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 C12orf56Q8IXR9 622 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 SYCP3Q8IZU3 236 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 CEP63Q96MT8 703 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 SRRTQ9BXP5 876 aaKnown RBP16.35■□□□□ 0.21
NFIX-208ENST00000587260 TTLL13PA6NNM8 815 aa16.34■□□□□ 0.21
NFIX-208ENST00000587260 TISP43B9A030 160 aa16.34■□□□□ 0.21
NFIX-208ENST00000587260 PITPNM1O00562 1244 aa16.34■□□□□ 0.21
NFIX-208ENST00000587260 HNRNPDLO14979 420 aaKnown RBP16.34■□□□□ 0.21
NFIX-208ENST00000587260 SFPQP23246 707 aaKnown RBP eCLIP16.34■□□□□ 0.21
NFIX-208ENST00000587260 CCL23P55773 120 aa16.34■□□□□ 0.21
NFIX-208ENST00000587260 SPAG1Q07617 926 aa16.34■□□□□ 0.21
NFIX-208ENST00000587260 MBTPS1Q14703 1052 aa16.34■□□□□ 0.21
NFIX-208ENST00000587260 TMEM132AQ24JP5 1023 aa16.34■□□□□ 0.21
NFIX-208ENST00000587260 FAM26DQ5JW98 314 aa16.34■□□□□ 0.21
NFIX-208ENST00000587260 CATSPER4Q7RTX7 472 aa16.34■□□□□ 0.21
NFIX-208ENST00000587260 FAM228AQ86W67 206 aa16.34■□□□□ 0.21
NFIX-208ENST00000587260 C7orf61Q8IZ16 206 aa16.34■□□□□ 0.21
NFIX-208ENST00000587260 SCLYQ96I15 445 aa16.34■□□□□ 0.21
NFIX-208ENST00000587260 PRMT7Q9NVM4 692 aaPredicted RBP16.34■□□□□ 0.21
NFIX-208ENST00000587260 NOC2LQ9Y3T9 749 aaKnown RBP16.34■□□□□ 0.21
NFIX-208ENST00000587260 LTBP2Q14767 1821 aa16.33■□□□□ 0.2
NFIX-208ENST00000587260 AP5Z1O43299 807 aa16.33■□□□□ 0.2
NFIX-208ENST00000587260 TSPAN1O60635 241 aa16.33■□□□□ 0.2
NFIX-208ENST00000587260 PIGRP01833 764 aa16.33■□□□□ 0.2
NFIX-208ENST00000587260 ATP1A3P13637 1013 aa16.33■□□□□ 0.2
NFIX-208ENST00000587260 RPL13P26373 211 aaKnown RBP16.33■□□□□ 0.2
NFIX-208ENST00000587260 EEF1GP26641 437 aaKnown RBP16.33■□□□□ 0.2
NFIX-208ENST00000587260 CYP2C18P33260 490 aa16.33■□□□□ 0.2
NFIX-208ENST00000587260 LIG4P49917 911 aa16.33■□□□□ 0.2
NFIX-208ENST00000587260 PRPF4BQ13523 1007 aaKnown RBP16.33■□□□□ 0.2
NFIX-208ENST00000587260 LPIN1Q14693 890 aa16.33■□□□□ 0.2
NFIX-208ENST00000587260 AMHR2Q16671 573 aa16.33■□□□□ 0.2
NFIX-208ENST00000587260 FBXO47Q5MNV8 452 aa16.33■□□□□ 0.2
NFIX-208ENST00000587260 FILIP1Q7Z7B0 1213 aa16.33■□□□□ 0.2
NFIX-208ENST00000587260 FAM114A1Q8IWE2 563 aa16.33■□□□□ 0.2
NFIX-208ENST00000587260 CPB2Q96IY4 423 aa16.33■□□□□ 0.2
NFIX-208ENST00000587260 TARS2Q9BW92 718 aaKnown RBP16.33■□□□□ 0.2
NFIX-208ENST00000587260 MRPL4Q9BYD3 311 aaKnown RBP16.33■□□□□ 0.2
NFIX-208ENST00000587260 WNT8AQ9H1J5 351 aa16.33■□□□□ 0.2
NFIX-208ENST00000587260 FZD8Q9H461 694 aa16.33■□□□□ 0.2
NFIX-208ENST00000587260 AGPAT3Q9NRZ7 376 aa16.33■□□□□ 0.2
NFIX-208ENST00000587260 DMAC2Q9NW81 257 aa16.33■□□□□ 0.2
NFIX-208ENST00000587260 CNTNAP2Q9UHC6 1331 aa16.32■□□□□ 0.2
NFIX-208ENST00000587260 TRIM43BA6NCK2 446 aa16.32■□□□□ 0.2
NFIX-208ENST00000587260 ACKR2O00590 384 aa16.32■□□□□ 0.2
NFIX-208ENST00000587260 RPS6KA5O75582 802 aa16.32■□□□□ 0.2
NFIX-208ENST00000587260 NR3C1P04150 777 aa16.32■□□□□ 0.2
NFIX-208ENST00000587260 CD52P31358 61 aa16.32■□□□□ 0.2
NFIX-208ENST00000587260 NFX1Q12986 1120 aaKnown RBP16.32■□□□□ 0.2
NFIX-208ENST00000587260 ADAM9Q13443 819 aa16.32■□□□□ 0.2
NFIX-208ENST00000587260 TCP11X2Q5H9J9 407 aa16.32■□□□□ 0.2
NFIX-208ENST00000587260 APTXQ7Z2E3 356 aaKnown RBP16.32■□□□□ 0.2
NFIX-208ENST00000587260 CDR2LQ86X02 465 aaPredicted RBP16.32■□□□□ 0.2
NFIX-208ENST00000587260 TRIM43Q96BQ3 446 aaPredicted RBP16.32■□□□□ 0.2
NFIX-208ENST00000587260 AGO3Q9H9G7 860 aaKnown RBP16.32■□□□□ 0.2
NFIX-208ENST00000587260 ANKFY1Q9P2R3 1169 aa16.32■□□□□ 0.2
NFIX-208ENST00000587260 LIMA1Q9UHB6 759 aaKnown RBP16.32■□□□□ 0.2
NFIX-208ENST00000587260 CETN3O15182 167 aa16.31■□□□□ 0.2
NFIX-208ENST00000587260 GNA14O95837 355 aa16.31■□□□□ 0.2
NFIX-208ENST00000587260 CDK11BP21127 795 aaKnown RBP16.31■□□□□ 0.2
NFIX-208ENST00000587260 NR2F2P24468 414 aa16.31■□□□□ 0.2
NFIX-208ENST00000587260 MARSP56192 900 aaKnown RBP16.31■□□□□ 0.2
NFIX-208ENST00000587260 FANCCQ00597 558 aa16.31■□□□□ 0.2
NFIX-208ENST00000587260 PAK2Q13177 524 aa16.31■□□□□ 0.2
NFIX-208ENST00000587260 FAM187BQ17R55 369 aa16.31■□□□□ 0.2
NFIX-208ENST00000587260 SLC39A4Q6P5W5 647 aa16.31■□□□□ 0.2
NFIX-208ENST00000587260 TSHZ1Q6ZSZ6 1077 aa16.31■□□□□ 0.2
NFIX-208ENST00000587260 PRIMPOLQ96LW4 560 aa16.31■□□□□ 0.2
NFIX-208ENST00000587260 HTATIP2Q9BUP3 242 aa16.31■□□□□ 0.2
NFIX-208ENST00000587260 ST3GAL5Q9UNP4 418 aa16.31■□□□□ 0.2
NFIX-208ENST00000587260 PIN4Q9Y237 131 aaKnown RBP16.31■□□□□ 0.2
NFIX-208ENST00000587260 STYXL1Q9Y6J8 313 aa16.31■□□□□ 0.2
NFIX-208ENST00000587260 TNRC18O15417 2968 aaPredicted RBP16.31■□□□□ 0.2
NFIX-208ENST00000587260 KCNJ18B7U540 433 aa16.3■□□□□ 0.2
NFIX-208ENST00000587260 ANKRD63C9JTQ0 380 aa16.3■□□□□ 0.2
NFIX-208ENST00000587260 CLIC2O15247 247 aa16.3■□□□□ 0.2
NFIX-208ENST00000587260 NBNO60934 754 aa16.3■□□□□ 0.2
NFIX-208ENST00000587260 HARSP12081 509 aaKnown RBP16.3■□□□□ 0.2
NFIX-208ENST00000587260 RAG1P15918 1043 aa16.3■□□□□ 0.2
NFIX-208ENST00000587260 ARF4P18085 180 aaPredicted RBP16.3■□□□□ 0.2
NFIX-208ENST00000587260 ITGB8P26012 769 aa16.3■□□□□ 0.2
NFIX-208ENST00000587260 MATR3P43243 847 aaKnown RBP eCLIP16.3■□□□□ 0.21e-7■■■□□ 15.4
NFIX-208ENST00000587260 KCNJ12Q14500 433 aa16.3■□□□□ 0.2
NFIX-208ENST00000587260 ATF7IP2Q5U623 682 aa16.3■□□□□ 0.2
NFIX-208ENST00000587260 ZPBP2Q6X784 338 aa16.3■□□□□ 0.2
NFIX-208ENST00000587260 MKNK1Q9BUB5 465 aa16.3■□□□□ 0.2
NFIX-208ENST00000587260 AGPAT5Q9NUQ2 364 aa16.3■□□□□ 0.2
NFIX-208ENST00000587260 KIAA0355O15063 1070 aa16.29■□□□□ 0.2
NFIX-208ENST00000587260 SLC16A3O15427 465 aaKnown RBP16.29■□□□□ 0.2
NFIX-208ENST00000587260 GARTP22102 1010 aa16.29■□□□□ 0.2
NFIX-208ENST00000587260 ADSSP30520 456 aa16.29■□□□□ 0.2
NFIX-208ENST00000587260 PCBP1Q15365 356 aaKnown RBP eCLIP16.29■□□□□ 0.2
NFIX-208ENST00000587260 EEF1DP3Q658K8 133 aa16.29■□□□□ 0.2
NFIX-208ENST00000587260 ARMCX5Q6P1M9 558 aa16.29■□□□□ 0.2
NFIX-208ENST00000587260 ZBTB33Q86T24 672 aa16.29■□□□□ 0.2
NFIX-208ENST00000587260 ANKRD20A12PQ8NF67 263 aa16.29■□□□□ 0.2
NFIX-208ENST00000587260 MRFAP1L1Q96HT8 127 aa16.29■□□□□ 0.2
NFIX-208ENST00000587260 ZBTB45Q96K62 511 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms