RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 UBE3AQ05086 875 aa16.33■□□□□ 0.2
ATG4D-207ENST00000587256 MCM6Q14566 821 aa16.33■□□□□ 0.2
ATG4D-207ENST00000587256 USP49Q70CQ1 688 aa16.33■□□□□ 0.2
ATG4D-207ENST00000587256 ATXN2LQ8WWM7 1075 aaKnown RBP16.33■□□□□ 0.2
ATG4D-207ENST00000587256 LARP4BQ92615 738 aaKnown RBP16.33■□□□□ 0.2
ATG4D-207ENST00000587256 HLA-CQ95604 372 aa16.33■□□□□ 0.2
ATG4D-207ENST00000587256 PPP2R3CQ969Q6 453 aa16.33■□□□□ 0.2
ATG4D-207ENST00000587256 C17orf75Q9HAS0 396 aa16.33■□□□□ 0.2
ATG4D-207ENST00000587256 TLR9Q9NR96 1032 aa16.33■□□□□ 0.2
ATG4D-207ENST00000587256 COG5Q9UP83 839 aa16.33■□□□□ 0.2
ATG4D-207ENST00000587256 PLXNA4Q9HCM2 1894 aa16.33■□□□□ 0.2
ATG4D-207ENST00000587256 UNC80Q8N2C7 3258 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 NPHP3-ACAD11A0A0J9YXS1 232 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 TTLL13PA6NNM8 815 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 SFI1A8K8P3 1242 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 K7ERI5 159 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 SPTLC2O15270 562 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 TBCAO75347 108 aaKnown RBP16.32■□□□□ 0.2
ATG4D-207ENST00000587256 POMCP01189 267 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 EDN1P05305 212 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 PLS3P13797 630 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 SMTNP53814 917 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 BCAR1P56945 870 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 MRPS5P82675 430 aaKnown RBP16.32■□□□□ 0.2
ATG4D-207ENST00000587256 PKP1Q13835 747 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 AAK1Q2M2I8 961 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 ATG2AQ2TAZ0 1938 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 EP400NLQ6ZTU2 488 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 LINC00301Q8NCQ3 95 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 MICAL1Q8TDZ2 1067 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 LRRC15Q8TF66 581 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 MRPS27Q92552 414 aaKnown RBP16.32■□□□□ 0.2
ATG4D-207ENST00000587256 FAM193BQ96PV7 902 aaPredicted RBP16.32■□□□□ 0.2
ATG4D-207ENST00000587256 REEP2Q9BRK0 252 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 RNF39Q9H2S5 420 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 BLOC1S4Q9NUP1 217 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 SPG21Q9NZD8 308 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 KANSL3Q9P2N6 904 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 TFIP11Q9UBB9 837 aaKnown RBP16.32■□□□□ 0.2
ATG4D-207ENST00000587256 PARP2Q9UGN5 583 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 PUF60Q9UHX1 559 aaKnown RBP16.32■□□□□ 0.2
ATG4D-207ENST00000587256 ODF2LQ9ULJ1 636 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 USP20Q9Y2K6 914 aa16.32■□□□□ 0.2
ATG4D-207ENST00000587256 MORC2Q9Y6X9 1032 aaPredicted RBP16.32■□□□□ 0.2
ATG4D-207ENST00000587256 CARNS1A5YM72 827 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 ARL5CA6NH57 179 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 SLC16A4O15374 487 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 FAM13AO94988 1023 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 YEATS4O95619 227 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 AKAP5P24588 427 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 IRS1P35568 1242 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 TFF2Q03403 129 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 KRT17Q04695 432 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 CAMK1Q14012 370 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 BECN1Q14457 450 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 DCAF4L1Q3SXM0 396 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 TJAP1Q5JTD0 557 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 ATF7IP2Q5U623 682 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 APBB1IPQ7Z5R6 666 aaPredicted RBP16.31■□□□□ 0.2
ATG4D-207ENST00000587256 SLC39A11Q8N1S5 342 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 TMEM169Q96HH4 297 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 ZFP42Q96MM3 310 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 RPS6KC1Q96S38 1066 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 GAD1Q99259 594 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 MRPL4Q9BYD3 311 aaKnown RBP16.31■□□□□ 0.2
ATG4D-207ENST00000587256 ZHX3Q9H4I2 956 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 NRDE2Q9H7Z3 1164 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 UBE2ZQ9H832 354 aaPredicted RBP16.31■□□□□ 0.2
ATG4D-207ENST00000587256 ENTPD7Q9NQZ7 604 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 LARSQ9P2J5 1176 aaKnown RBP16.31■□□□□ 0.2
ATG4D-207ENST00000587256 ARHGAP28Q9P2N2 729 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 STK17AQ9UEE5 414 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 DAXXQ9UER7 740 aaPredicted RBP16.31■□□□□ 0.2
ATG4D-207ENST00000587256 KCNG1Q9UIX4 513 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 LZTS1Q9Y250 596 aa16.31■□□□□ 0.2
ATG4D-207ENST00000587256 RBM19Q9Y4C8 960 aaKnown RBP16.31■□□□□ 0.2
ATG4D-207ENST00000587256 NT5C1B-RDH14C9J2C7 533 aa16.3■□□□□ 0.2
ATG4D-207ENST00000587256 SCNN1GP51170 649 aa16.3■□□□□ 0.2
ATG4D-207ENST00000587256 AFF1P51825 1210 aaKnown RBP16.3■□□□□ 0.2
ATG4D-207ENST00000587256 PLCB3Q01970 1234 aa16.3■□□□□ 0.2
ATG4D-207ENST00000587256 STRN3Q13033 797 aa16.3■□□□□ 0.2
ATG4D-207ENST00000587256 ARSHQ5FYA8 562 aa16.3■□□□□ 0.2
ATG4D-207ENST00000587256 RRAGBQ5VZM2 374 aa16.3■□□□□ 0.2
ATG4D-207ENST00000587256 PLPP4Q5VZY2 271 aa16.3■□□□□ 0.2
ATG4D-207ENST00000587256 EEF1DP3Q658K8 133 aa16.3■□□□□ 0.2
ATG4D-207ENST00000587256 CCDC73Q6ZRK6 1079 aa16.3■□□□□ 0.2
ATG4D-207ENST00000587256 ZNF280BQ86YH2 543 aa16.3■□□□□ 0.2
ATG4D-207ENST00000587256 SPIRE2Q8WWL2 714 aa16.3■□□□□ 0.2
ATG4D-207ENST00000587256 ASB2Q96Q27 587 aa16.3■□□□□ 0.2
ATG4D-207ENST00000587256 TMEM134Q9H6X4 195 aa16.3■□□□□ 0.2
ATG4D-207ENST00000587256 CLDND1Q9NY35 253 aa16.3■□□□□ 0.2
ATG4D-207ENST00000587256 DNAJB4Q9UDY4 337 aa16.3■□□□□ 0.2
ATG4D-207ENST00000587256 GIT1Q9Y2X7 761 aa16.3■□□□□ 0.2
ATG4D-207ENST00000587256 PCDHGC5Q9Y5F6 944 aa16.3■□□□□ 0.2
ATG4D-207ENST00000587256 MYO7AQ13402 2215 aa16.3■□□□□ 0.2
ATG4D-207ENST00000587256 ZMYM2Q9UBW7 1377 aa16.29■□□□□ 0.2
ATG4D-207ENST00000587256 H0YCG3 227 aa16.29■□□□□ 0.2
ATG4D-207ENST00000587256 K7ENM7 598 aa16.29■□□□□ 0.2
ATG4D-207ENST00000587256 B4GALT3O60512 393 aa16.29■□□□□ 0.2
ATG4D-207ENST00000587256 PPP6R2O75170 966 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms