RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 SYN2Q92777 582 aaPredicted RBP20.19■□□□□ 0.82
RETREG3-205ENST00000586870 CCDC43Q96MW1 224 aaKnown RBP20.19■□□□□ 0.82
RETREG3-205ENST00000586870 MKNK1Q9BUB5 465 aa20.19■□□□□ 0.82
RETREG3-205ENST00000586870 RNPEPQ9H4A4 650 aa20.19■□□□□ 0.82
RETREG3-205ENST00000586870 PDLIM7Q9NR12 457 aa20.19■□□□□ 0.82
RETREG3-205ENST00000586870 GABBR1Q9UBS5 961 aa20.19■□□□□ 0.82
RETREG3-205ENST00000586870 GTF2IRD1Q9UHL9 959 aa20.19■□□□□ 0.82
RETREG3-205ENST00000586870 PPP1R37O75864 691 aa20.18■□□□□ 0.82
RETREG3-205ENST00000586870 IPO7O95373 1038 aaKnown RBP20.18■□□□□ 0.82
RETREG3-205ENST00000586870 AFPP02771 609 aaKnown RBP20.18■□□□□ 0.82
RETREG3-205ENST00000586870 PSMC2P35998 433 aaKnown RBP20.18■□□□□ 0.82
RETREG3-205ENST00000586870 SLC26A2P50443 739 aa20.18■□□□□ 0.82
RETREG3-205ENST00000586870 KCNA1Q09470 495 aa20.18■□□□□ 0.82
RETREG3-205ENST00000586870 MYBPC2Q14324 1141 aa20.18■□□□□ 0.82
RETREG3-205ENST00000586870 ZC2HC1CQ53FD0 456 aaPredicted RBP20.18■□□□□ 0.82
RETREG3-205ENST00000586870 TRMT1LQ7Z2T5 733 aaKnown RBP20.18■□□□□ 0.82
RETREG3-205ENST00000586870 MTERF4Q7Z6M4 381 aaKnown RBP20.18■□□□□ 0.82
RETREG3-205ENST00000586870 CCDC155Q8N6L0 562 aa20.18■□□□□ 0.82
RETREG3-205ENST00000586870 PCYT2Q99447 389 aa20.18■□□□□ 0.82
RETREG3-205ENST00000586870 LSM14BQ9BX40 385 aaKnown RBP20.18■□□□□ 0.82
RETREG3-205ENST00000586870 CLIC2O15247 247 aa20.17■□□□□ 0.82
RETREG3-205ENST00000586870 AKAP3O75969 853 aa20.17■□□□□ 0.82
RETREG3-205ENST00000586870 CD4P01730 458 aa20.17■□□□□ 0.82
RETREG3-205ENST00000586870 UGCGQ16739 394 aa20.17■□□□□ 0.82
RETREG3-205ENST00000586870 GDF6Q6KF10 455 aaPredicted RBP20.17■□□□□ 0.82
RETREG3-205ENST00000586870 RRAGAQ7L523 313 aa20.17■□□□□ 0.82
RETREG3-205ENST00000586870 CCDC60Q8IWA6 550 aaPredicted RBP20.17■□□□□ 0.82
RETREG3-205ENST00000586870 ANKRD7Q92527 254 aa20.17■□□□□ 0.82
RETREG3-205ENST00000586870 CCDC42Q96M95 316 aa20.17■□□□□ 0.82
RETREG3-205ENST00000586870 GBP3Q9H0R5 595 aa20.17■□□□□ 0.82
RETREG3-205ENST00000586870 SETD4Q9NVD3 440 aa20.17■□□□□ 0.82
RETREG3-205ENST00000586870 A0A0U1RQJ8 604 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 LRRC53A6NM62 1247 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 NOL4O94818 638 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 PLS3P13797 630 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 PPFIA1Q13136 1202 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 TUBB2AQ13885 445 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 ZNF569Q5MCW4 686 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 SLC9A9Q8IVB4 645 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 SLC17A8Q8NDX2 589 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 AFAP1L1Q8TED9 768 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 ATRIPQ8WXE1 791 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 ATP6V0A1Q93050 837 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 DRC1Q96MC2 740 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 MAP7D2Q96T17 732 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 TUBB2BQ9BVA1 445 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 PPP1R12CQ9BZL4 782 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 ST6GALNAC4Q9H4F1 302 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 TMEM206Q9H813 350 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 DMAC2Q9NW81 257 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 NRCAMQ92823 1304 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 IGKV6D-21A0A0A0MT36 114 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 TRIM43BA6NCK2 446 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 CYP2C9P11712 490 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 IGBP1P78318 339 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 RBM10P98175 930 aaKnown RBP20.16■□□□□ 0.82
RETREG3-205ENST00000586870 NCBP1Q09161 790 aaKnown RBP20.16■□□□□ 0.82
RETREG3-205ENST00000586870 OTUD6AQ7L8S5 288 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 TRIM43Q96BQ3 446 aaPredicted RBP20.16■□□□□ 0.82
RETREG3-205ENST00000586870 IRX2Q9BZI1 471 aaPredicted RBP20.16■□□□□ 0.82
RETREG3-205ENST00000586870 HIPK3Q9H422 1215 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 PLCB1Q9NQ66 1216 aa20.16■□□□□ 0.82
RETREG3-205ENST00000586870 CGNQ9P2M7 1197 aaKnown RBP20.16■□□□□ 0.82
RETREG3-205ENST00000586870 MYH11P35749 1972 aa20.15■□□□□ 0.82
RETREG3-205ENST00000586870 K7ENM7 598 aa20.15■□□□□ 0.82
RETREG3-205ENST00000586870 KIAA0355O15063 1070 aa20.15■□□□□ 0.82
RETREG3-205ENST00000586870 USO1O60763 962 aaKnown RBP20.15■□□□□ 0.82
RETREG3-205ENST00000586870 CASP4P49662 377 aa20.15■□□□□ 0.82
RETREG3-205ENST00000586870 PLCB4Q15147 1175 aa20.15■□□□□ 0.82
RETREG3-205ENST00000586870 SPA17Q15506 151 aa20.15■□□□□ 0.82
RETREG3-205ENST00000586870 XKR9Q5GH70 373 aa20.15■□□□□ 0.82
RETREG3-205ENST00000586870 KIAA1328Q86T90 577 aa20.15■□□□□ 0.82
RETREG3-205ENST00000586870 FAM186BQ8IYM0 893 aa20.15■□□□□ 0.82
RETREG3-205ENST00000586870 ZNF710Q8N1W2 664 aa20.15■□□□□ 0.82
RETREG3-205ENST00000586870 BORCS6Q96GS4 357 aa20.15■□□□□ 0.82
RETREG3-205ENST00000586870 ACCSQ96QU6 501 aa20.15■□□□□ 0.82
RETREG3-205ENST00000586870 AGPAT3Q9NRZ7 376 aa20.15■□□□□ 0.82
RETREG3-205ENST00000586870 NRBP2Q9NSY0 501 aa20.15■□□□□ 0.82
RETREG3-205ENST00000586870 ARHGAP20Q9P2F6 1191 aa20.15■□□□□ 0.82
RETREG3-205ENST00000586870 MAFBQ9Y5Q3 323 aaPredicted RBP20.15■□□□□ 0.82
RETREG3-205ENST00000586870 SSU72P8A0A1W2PR75 194 aa20.14■□□□□ 0.81
RETREG3-205ENST00000586870 GTPBP10A4D1E9 387 aaKnown RBP20.14■□□□□ 0.81
RETREG3-205ENST00000586870 RRN3P2A6NIE6 340 aa20.14■□□□□ 0.81
RETREG3-205ENST00000586870 HBP1O60381 514 aa20.14■□□□□ 0.81
RETREG3-205ENST00000586870 LCA5LO95447 670 aa20.14■□□□□ 0.81
RETREG3-205ENST00000586870 SNRPFP62306 86 aaKnown RBP20.14■□□□□ 0.81
RETREG3-205ENST00000586870 ZNF200P98182 395 aaPredicted RBP20.14■□□□□ 0.81
RETREG3-205ENST00000586870 MAPK8IP2Q13387 824 aaPredicted RBP20.14■□□□□ 0.81
RETREG3-205ENST00000586870 BFSP2Q13515 415 aa20.14■□□□□ 0.81
RETREG3-205ENST00000586870 SFMBT2Q5VUG0 894 aa20.14■□□□□ 0.81
RETREG3-205ENST00000586870 SYCP3Q8IZU3 236 aa20.14■□□□□ 0.81
RETREG3-205ENST00000586870 TMEM174Q8WUU8 243 aa20.14■□□□□ 0.81
RETREG3-205ENST00000586870 SLC35C1Q96A29 364 aa20.14■□□□□ 0.81
RETREG3-205ENST00000586870 GANQ9H2C0 597 aa20.14■□□□□ 0.81
RETREG3-205ENST00000586870 TBX21Q9UL17 535 aa20.14■□□□□ 0.81
RETREG3-205ENST00000586870 KRT86O43790 486 aa20.13■□□□□ 0.81
RETREG3-205ENST00000586870 TIMP1P01033 207 aa20.13■□□□□ 0.81
RETREG3-205ENST00000586870 INSRRP14616 1297 aa20.13■□□□□ 0.81
RETREG3-205ENST00000586870 POLR2FP61218 127 aaKnown RBP20.13■□□□□ 0.81
RETREG3-205ENST00000586870 GRIK4Q16099 956 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms