RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 DCAF4L1Q3SXM0 396 aa11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 KCNK18Q7Z418 384 aa11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 SLC39A11Q8N1S5 342 aa11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 SMG8Q8ND04 991 aaKnown RBP11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 SPIRE2Q8WWL2 714 aa11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 KCNN1Q92952 543 aa11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 CPB2Q96IY4 423 aa11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 NTPCRQ9BSD7 190 aaKnown RBP11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 EIF2AQ9BY44 585 aaKnown RBP11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 NGRNQ9NPE2 291 aaKnown RBP11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 KMT5AQ9NQR1 393 aa11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 FOXD4L1Q9NU39 408 aa11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 LARSQ9P2J5 1176 aaKnown RBP11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 ARHGAP28Q9P2N2 729 aa11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 STK17AQ9UEE5 414 aa11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 FAM50BQ9Y247 325 aa11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 INPP5FQ9Y2H2 1132 aa11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 CLIC4Q9Y696 253 aa11.47□□□□□ -0.57
SMARCA4-209ENST00000586122 CCDC169A6NNP5 214 aa11.46□□□□□ -0.57
SMARCA4-209ENST00000586122 FSCN2O14926 492 aa11.46□□□□□ -0.57
SMARCA4-209ENST00000586122 ZC3H11AO75152 810 aaKnown RBP eCLIP11.46□□□□□ -0.57
SMARCA4-209ENST00000586122 NR1I2O75469 434 aa11.46□□□□□ -0.57
SMARCA4-209ENST00000586122 YEATS4O95619 227 aa11.46□□□□□ -0.57
SMARCA4-209ENST00000586122 PLS3P13797 630 aa11.46□□□□□ -0.57
SMARCA4-209ENST00000586122 NPTX2P47972 431 aa11.46□□□□□ -0.57
SMARCA4-209ENST00000586122 NASPP49321 788 aaPredicted RBP11.46□□□□□ -0.57
SMARCA4-209ENST00000586122 PEX3P56589 373 aa11.46□□□□□ -0.57
SMARCA4-209ENST00000586122 MAPK7Q13164 816 aa11.46□□□□□ -0.57
SMARCA4-209ENST00000586122 GIT2Q14161 759 aa11.46□□□□□ -0.57
SMARCA4-209ENST00000586122 LEXMQ3ZCV2 418 aa11.46□□□□□ -0.57
SMARCA4-209ENST00000586122 ATL3Q6DD88 541 aa11.46□□□□□ -0.57
SMARCA4-209ENST00000586122 DAW1Q8N136 415 aa11.46□□□□□ -0.57
SMARCA4-209ENST00000586122 KRI1Q8N9T8 703 aaKnown RBP11.46□□□□□ -0.57
SMARCA4-209ENST00000586122 MICAL1Q8TDZ2 1067 aa11.46□□□□□ -0.57
SMARCA4-209ENST00000586122 USP28Q96RU2 1077 aa11.46□□□□□ -0.57
SMARCA4-209ENST00000586122 NRDE2Q9H7Z3 1164 aa11.46□□□□□ -0.57
SMARCA4-209ENST00000586122 HCSTQ9UBK5 93 aa11.46□□□□□ -0.57
SMARCA4-209ENST00000586122 FBXO2Q9UK22 296 aaPredicted RBP11.46□□□□□ -0.57
SMARCA4-209ENST00000586122 CITO14578 2027 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 ARL5CA6NH57 179 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 MEIS3P2A8K0S8 358 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 DLL1O00548 723 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 PPP6R2O75170 966 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 NPTXRO95502 500 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 ALDH2P05091 517 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 GALTP07902 379 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 SRGAP2BP0DMP2 458 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 ZSCAN22P10073 491 aaPredicted RBP11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 PLCG1P19174 1290 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 DNAJB1P25685 340 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 MARCKSP29966 332 aaPredicted RBP11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 HYAL1Q12794 435 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 GRIK3Q13003 919 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 STRN3Q13033 797 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 SMC1AQ14683 1233 aaKnown RBP11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 STK38Q15208 465 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 CTC1Q2NKJ3 1217 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 CCDC73Q6ZRK6 1079 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 DDX53Q86TM3 631 aaKnown RBP11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 EFHBQ8N7U6 833 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 LARP4BQ92615 738 aaKnown RBP11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 RAD54LQ92698 747 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 IGSF21Q96ID5 467 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 RPS6KC1Q96S38 1066 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 GAD1Q99259 594 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 TCF25Q9BQ70 676 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 MRPL4Q9BYD3 311 aaKnown RBP11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 NXF3Q9H4D5 531 aaKnown RBP11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 PDZD7Q9H5P4 517 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 BLOC1S4Q9NUP1 217 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 TNFSF13BQ9Y275 285 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 UNC80Q8N2C7 3258 aa11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 TCF20Q9UGU0 1960 aaKnown RBP11.45□□□□□ -0.58
SMARCA4-209ENST00000586122 TBCAO75347 108 aaKnown RBP11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 F13A1P00488 732 aa11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 BMP1P13497 986 aa11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 KCNA5P22460 613 aa11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 IRS1P35568 1242 aa11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 DDIT3P35638 169 aa11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 MLH1P40692 756 aa11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 TFF2Q03403 129 aa11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 GRIN1Q05586 938 aa11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 DSC1Q08554 894 aa11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 KARSQ15046 597 aaKnown RBP11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 LONRF3Q496Y0 759 aa11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 ATF7IP2Q5U623 682 aa11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 FAM173BQ6P4H8 233 aa11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 ZPBP2Q6X784 338 aa11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 GPBP1Q86WP2 473 aa11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 LINC00301Q8NCQ3 95 aa11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 PLIN2Q99541 437 aa11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 KIFC3Q9BVG8 833 aa11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 COL25A1Q9BXS0 654 aaPredicted RBP11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 TLE6Q9H808 572 aa11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 PARVGQ9HBI0 331 aa11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 ENTPD7Q9NQZ7 604 aa11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 CLDND1Q9NY35 253 aa11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 CFAP45Q9UL16 551 aa11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 FAN1Q9Y2M0 1017 aa11.44□□□□□ -0.58
SMARCA4-209ENST00000586122 IRAK3Q9Y616 596 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms