RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 B4GALT5O43286 388 aa20.05■□□□□ 0.8
RFFL-211ENST00000584541 TOM1L1O75674 476 aa20.05■□□□□ 0.8
RFFL-211ENST00000584541 ZSCAN20P17040 1043 aaPredicted RBP20.05■□□□□ 0.8
RFFL-211ENST00000584541 ARF4P18085 180 aaPredicted RBP20.05■□□□□ 0.8
RFFL-211ENST00000584541 LRRC63Q05C16 580 aa20.05■□□□□ 0.8
RFFL-211ENST00000584541 MBTPS1Q14703 1052 aa20.05■□□□□ 0.8
RFFL-211ENST00000584541 CENPPQ6IPU0 288 aa20.05■□□□□ 0.8
RFFL-211ENST00000584541 CPB2Q96IY4 423 aa20.05■□□□□ 0.8
RFFL-211ENST00000584541 TCHPQ9BT92 498 aa20.05■□□□□ 0.8
RFFL-211ENST00000584541 TSPY26PQ9H489 355 aa20.05■□□□□ 0.8
RFFL-211ENST00000584541 CHST12Q9NRB3 414 aa20.05■□□□□ 0.8
RFFL-211ENST00000584541 RWDD2AQ9UIY3 292 aa20.05■□□□□ 0.8
RFFL-211ENST00000584541 TNFSF13BQ9Y275 285 aa20.05■□□□□ 0.8
RFFL-211ENST00000584541 CLDN3O15551 220 aa20.04■□□□□ 0.8
RFFL-211ENST00000584541 NBNO60934 754 aa20.04■□□□□ 0.8
RFFL-211ENST00000584541 EDN1P05305 212 aa20.04■□□□□ 0.8
RFFL-211ENST00000584541 MFSD5Q6N075 450 aa20.04■□□□□ 0.8
RFFL-211ENST00000584541 ARMCX5Q6P1M9 558 aa20.04■□□□□ 0.8
RFFL-211ENST00000584541 C11orf57Q6ZUT1 292 aaPredicted RBP20.04■□□□□ 0.8
RFFL-211ENST00000584541 POMGNT1Q8WZA1 660 aa20.04■□□□□ 0.8
RFFL-211ENST00000584541 SEPT8Q92599 483 aa20.04■□□□□ 0.8
RFFL-211ENST00000584541 APBB2Q92870 758 aa20.04■□□□□ 0.8
RFFL-211ENST00000584541 CCDC51Q96ER9 411 aa20.04■□□□□ 0.8
RFFL-211ENST00000584541 SEMA6BQ9H3T3 888 aa20.04■□□□□ 0.8
RFFL-211ENST00000584541 ANKFY1Q9P2R3 1169 aa20.04■□□□□ 0.8
RFFL-211ENST00000584541 TRAF3IP3Q9Y228 551 aa20.04■□□□□ 0.8
RFFL-211ENST00000584541 USP20Q9Y2K6 914 aa20.04■□□□□ 0.8
RFFL-211ENST00000584541 A0A1B0GUA9 196 aa20.03■□□□□ 0.8
RFFL-211ENST00000584541 ANKRD63C9JTQ0 380 aa20.03■□□□□ 0.8
RFFL-211ENST00000584541 TGFB1I1O43294 461 aa20.03■□□□□ 0.8
RFFL-211ENST00000584541 GARTP22102 1010 aa20.03■□□□□ 0.8
RFFL-211ENST00000584541 RPL13P26373 211 aaKnown RBP20.03■□□□□ 0.8
RFFL-211ENST00000584541 STX17P56962 302 aa20.03■□□□□ 0.8
RFFL-211ENST00000584541 HSP90AA2PQ14568 343 aaPredicted RBP20.03■□□□□ 0.8
RFFL-211ENST00000584541 TPD52L1Q16890 204 aaPredicted RBP20.03■□□□□ 0.8
RFFL-211ENST00000584541 EDRF1Q3B7T1 1238 aa20.03■□□□□ 0.8
RFFL-211ENST00000584541 ZNF568Q3ZCX4 644 aa20.03■□□□□ 0.8
RFFL-211ENST00000584541 PLEKHG4Q58EX7 1191 aa20.03■□□□□ 0.8
RFFL-211ENST00000584541 FOXR2Q6PJQ5 311 aa20.03■□□□□ 0.8
RFFL-211ENST00000584541 MPZL3Q6UWV2 235 aa20.03■□□□□ 0.8
RFFL-211ENST00000584541 RPUSD2Q8IZ73 545 aaKnown RBP20.03■□□□□ 0.8
RFFL-211ENST00000584541 FTHL17Q9BXU8 183 aa20.03■□□□□ 0.8
RFFL-211ENST00000584541 AGPAT3Q9NRZ7 376 aa20.03■□□□□ 0.8
RFFL-211ENST00000584541 NR2E3Q9Y5X4 410 aa20.03■□□□□ 0.8
RFFL-211ENST00000584541 LTBP2Q14767 1821 aa20.03■□□□□ 0.8
RFFL-211ENST00000584541 TTLL13PA6NNM8 815 aa20.02■□□□□ 0.8
RFFL-211ENST00000584541 KIAA0391O15091 583 aaKnown RBP20.02■□□□□ 0.8
RFFL-211ENST00000584541 CXCL10P02778 98 aa20.02■□□□□ 0.8
RFFL-211ENST00000584541 HOXA11P31270 313 aaPredicted RBP20.02■□□□□ 0.8
RFFL-211ENST00000584541 ZNF165P49910 485 aa20.02■□□□□ 0.8
RFFL-211ENST00000584541 DCAF4L1Q3SXM0 396 aa20.02■□□□□ 0.8
RFFL-211ENST00000584541 ANKRD40Q6AI12 368 aa20.02■□□□□ 0.8
RFFL-211ENST00000584541 TWF2Q6IBS0 349 aaKnown RBP20.02■□□□□ 0.8
RFFL-211ENST00000584541 SLC27A1Q6PCB7 646 aa20.02■□□□□ 0.8
RFFL-211ENST00000584541 DEFB128Q7Z7B8 93 aa20.02■□□□□ 0.8
RFFL-211ENST00000584541 BPIFA3Q9BQP9 254 aa20.02■□□□□ 0.8
RFFL-211ENST00000584541 OSBPL7Q9BZF2 842 aa20.02■□□□□ 0.8
RFFL-211ENST00000584541 TRIM6Q9C030 488 aaPredicted RBP20.02■□□□□ 0.8
RFFL-211ENST00000584541 IKZF4Q9H2S9 585 aa20.02■□□□□ 0.8
RFFL-211ENST00000584541 PDZD7Q9H5P4 517 aa20.02■□□□□ 0.8
RFFL-211ENST00000584541 STYXL1Q9Y6J8 313 aa20.02■□□□□ 0.8
RFFL-211ENST00000584541 TRIM49BA6NDI0 452 aa20.01■□□□□ 0.79
RFFL-211ENST00000584541 CLIC2O15247 247 aa20.01■□□□□ 0.79
RFFL-211ENST00000584541 FGFR1OPO95684 399 aaKnown RBP20.01■□□□□ 0.79
RFFL-211ENST00000584541 NR3C1P04150 777 aa20.01■□□□□ 0.79
RFFL-211ENST00000584541 PFKMP08237 780 aa20.01■□□□□ 0.79
RFFL-211ENST00000584541 PROZP22891 400 aa20.01■□□□□ 0.79
RFFL-211ENST00000584541 ITGB8P26012 769 aa20.01■□□□□ 0.79
RFFL-211ENST00000584541 FKBP3Q00688 224 aaKnown RBP20.01■□□□□ 0.79
RFFL-211ENST00000584541 PPIGQ13427 754 aaKnown RBP eCLIP20.01■□□□□ 0.799e-12■■■■□ 24.8
RFFL-211ENST00000584541 MYBPC2Q14324 1141 aa20.01■□□□□ 0.79
RFFL-211ENST00000584541 NOLC1Q14978 699 aaKnown RBP eCLIP20.01■□□□□ 0.79
RFFL-211ENST00000584541 NFIL3Q16649 462 aa20.01■□□□□ 0.79
RFFL-211ENST00000584541 ZCWPW2Q504Y3 356 aa20.01■□□□□ 0.79
RFFL-211ENST00000584541 SLC39A4Q6P5W5 647 aa20.01■□□□□ 0.79
RFFL-211ENST00000584541 ZBTB33Q86T24 672 aa20.01■□□□□ 0.79
RFFL-211ENST00000584541 C12orf56Q8IXR9 622 aa20.01■□□□□ 0.79
RFFL-211ENST00000584541 DBF4BQ8NFT6 615 aa20.01■□□□□ 0.79
RFFL-211ENST00000584541 MSTO1Q9BUK6 570 aa20.01■□□□□ 0.79
RFFL-211ENST00000584541 SMTNL1A8MU46 457 aa20■□□□□ 0.79
RFFL-211ENST00000584541 TISP43B9A030 160 aa20■□□□□ 0.79
RFFL-211ENST00000584541 LDHAP00338 332 aaKnown RBP20■□□□□ 0.79
RFFL-211ENST00000584541 MCF2P10911 925 aa20■□□□□ 0.79
RFFL-211ENST00000584541 HARSP12081 509 aaKnown RBP20■□□□□ 0.79
RFFL-211ENST00000584541 CSF2RAP15509 400 aa20■□□□□ 0.79
RFFL-211ENST00000584541 NR2F2P24468 414 aa20■□□□□ 0.79
RFFL-211ENST00000584541 CYP2J2P51589 502 aa20■□□□□ 0.79
RFFL-211ENST00000584541 PMS1P54277 932 aaKnown RBP20■□□□□ 0.79
RFFL-211ENST00000584541 MCL1Q07820 350 aa20■□□□□ 0.79
RFFL-211ENST00000584541 GPNMBQ14956 572 aa20■□□□□ 0.79
RFFL-211ENST00000584541 KYAT1Q16773 422 aa20■□□□□ 0.79
RFFL-211ENST00000584541 EEF1DP3Q658K8 133 aa20■□□□□ 0.79
RFFL-211ENST00000584541 TTI2Q6NXR4 508 aa20■□□□□ 0.79
RFFL-211ENST00000584541 CNKSR3Q6P9H4 555 aa20■□□□□ 0.79
RFFL-211ENST00000584541 CDR2LQ86X02 465 aaPredicted RBP20■□□□□ 0.79
RFFL-211ENST00000584541 CSGALNACT2Q8N6G5 542 aa20■□□□□ 0.79
RFFL-211ENST00000584541 ENOX1Q8TC92 643 aaKnown RBP20■□□□□ 0.79
RFFL-211ENST00000584541 ZBTB45Q96K62 511 aaPredicted RBP20■□□□□ 0.79
RFFL-211ENST00000584541 LBHD1Q9BQE6 289 aaPredicted RBP20■□□□□ 0.79
RFFL-211ENST00000584541 PCIF1Q9H4Z3 704 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms