RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 PRRC2BQ5JSZ5 2229 aaKnown RBP29.94■■■□□ 2.38
SMARCD2-210ENST00000584400 PLS3P13797 630 aa29.93■■■□□ 2.38
SMARCD2-210ENST00000584400 PLCG1P19174 1290 aa29.93■■■□□ 2.38
SMARCD2-210ENST00000584400 BMS1Q14692 1282 aaKnown RBP29.93■■■□□ 2.38
SMARCD2-210ENST00000584400 DAW1Q8N136 415 aa29.93■■■□□ 2.38
SMARCD2-210ENST00000584400 SLC39A11Q8N1S5 342 aa29.93■■■□□ 2.38
SMARCD2-210ENST00000584400 SPIRE2Q8WWL2 714 aa29.93■■■□□ 2.38
SMARCD2-210ENST00000584400 TMEM169Q96HH4 297 aa29.93■■■□□ 2.38
SMARCD2-210ENST00000584400 NTPCRQ9BSD7 190 aaKnown RBP29.93■■■□□ 2.38
SMARCD2-210ENST00000584400 LARSQ9P2J5 1176 aaKnown RBP29.93■■■□□ 2.38
SMARCD2-210ENST00000584400 ODF2LQ9ULJ1 636 aa29.93■■■□□ 2.38
SMARCD2-210ENST00000584400 ZMYM2Q9UBW7 1377 aa29.92■■■□□ 2.38
SMARCD2-210ENST00000584400 H0YCG3 227 aa29.92■■■□□ 2.38
SMARCD2-210ENST00000584400 DNAJB1P25685 340 aa29.92■■■□□ 2.38
SMARCD2-210ENST00000584400 MAPK7Q13164 816 aa29.92■■■□□ 2.38
SMARCD2-210ENST00000584400 CDR2LQ86X02 465 aaPredicted RBP29.92■■■□□ 2.38
SMARCD2-210ENST00000584400 SPRYD3Q8NCJ5 442 aa29.92■■■□□ 2.38
SMARCD2-210ENST00000584400 RAD54LQ92698 747 aa29.92■■■□□ 2.38
SMARCD2-210ENST00000584400 PABPC5Q96DU9 382 aaKnown RBP29.92■■■□□ 2.38
SMARCD2-210ENST00000584400 NRDE2Q9H7Z3 1164 aa29.92■■■□□ 2.38
SMARCD2-210ENST00000584400 UBE2ZQ9H832 354 aaPredicted RBP29.92■■■□□ 2.38
SMARCD2-210ENST00000584400 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP29.91■■■□□ 2.38
SMARCD2-210ENST00000584400 FSD2A1L4K1 749 aa29.91■■■□□ 2.38
SMARCD2-210ENST00000584400 INPPL1O15357 1258 aa29.91■■■□□ 2.38
SMARCD2-210ENST00000584400 CSPG5O95196 566 aa29.91■■■□□ 2.38
SMARCD2-210ENST00000584400 KRT18P05783 430 aaKnown RBP29.91■■■□□ 2.38
SMARCD2-210ENST00000584400 DDIT3P35638 169 aa29.91■■■□□ 2.38
SMARCD2-210ENST00000584400 RAD51AP2Q09MP3 1159 aa29.91■■■□□ 2.38
SMARCD2-210ENST00000584400 DCAF4L1Q3SXM0 396 aa29.91■■■□□ 2.38
SMARCD2-210ENST00000584400 GPBP1Q86WP2 473 aa29.91■■■□□ 2.38
SMARCD2-210ENST00000584400 LARP4BQ92615 738 aaKnown RBP29.91■■■□□ 2.38
SMARCD2-210ENST00000584400 EPSTI1Q96J88 318 aa29.91■■■□□ 2.38
SMARCD2-210ENST00000584400 TMEM175Q9BSA9 504 aa29.91■■■□□ 2.38
SMARCD2-210ENST00000584400 APOL6Q9BWW8 343 aa29.91■■■□□ 2.38
SMARCD2-210ENST00000584400 GBP3Q9H0R5 595 aa29.91■■■□□ 2.38
SMARCD2-210ENST00000584400 NXF3Q9H4D5 531 aaKnown RBP29.91■■■□□ 2.38
SMARCD2-210ENST00000584400 PDZD7Q9H5P4 517 aa29.91■■■□□ 2.38
SMARCD2-210ENST00000584400 NGRNQ9NPE2 291 aaKnown RBP29.91■■■□□ 2.38
SMARCD2-210ENST00000584400 ARHGAP28Q9P2N2 729 aa29.91■■■□□ 2.38
SMARCD2-210ENST00000584400 STK17AQ9UEE5 414 aa29.91■■■□□ 2.38
SMARCD2-210ENST00000584400 STK39Q9UEW8 545 aa29.91■■■□□ 2.38
SMARCD2-210ENST00000584400 HES2Q9Y543 173 aa29.91■■■□□ 2.38
SMARCD2-210ENST00000584400 ARL5CA6NH57 179 aa29.9■■■□□ 2.38
SMARCD2-210ENST00000584400 SFI1A8K8P3 1242 aa29.9■■■□□ 2.38
SMARCD2-210ENST00000584400 NR1I2O75469 434 aa29.9■■■□□ 2.38
SMARCD2-210ENST00000584400 F13A1P00488 732 aa29.9■■■□□ 2.38
SMARCD2-210ENST00000584400 ALDH2P05091 517 aa29.9■■■□□ 2.38
SMARCD2-210ENST00000584400 SCP2P22307 547 aa29.9■■■□□ 2.38
SMARCD2-210ENST00000584400 PBX3P40426 434 aa29.9■■■□□ 2.38
SMARCD2-210ENST00000584400 MLH1P40692 756 aa29.9■■■□□ 2.38
SMARCD2-210ENST00000584400 DHX8Q14562 1220 aaKnown RBP29.9■■■□□ 2.38
SMARCD2-210ENST00000584400 SPECC1Q5M775 1068 aa29.9■■■□□ 2.38
SMARCD2-210ENST00000584400 ATF7IP2Q5U623 682 aa29.9■■■□□ 2.38
SMARCD2-210ENST00000584400 ATL3Q6DD88 541 aa29.9■■■□□ 2.38
SMARCD2-210ENST00000584400 LINC00301Q8NCQ3 95 aa29.9■■■□□ 2.38
SMARCD2-210ENST00000584400 CLIC6Q96NY7 704 aa29.9■■■□□ 2.38
SMARCD2-210ENST00000584400 GAD1Q99259 594 aa29.9■■■□□ 2.38
SMARCD2-210ENST00000584400 MRPL4Q9BYD3 311 aaKnown RBP29.9■■■□□ 2.38
SMARCD2-210ENST00000584400 RNF39Q9H2S5 420 aa29.9■■■□□ 2.38
SMARCD2-210ENST00000584400 BLOC1S4Q9NUP1 217 aa29.9■■■□□ 2.38
SMARCD2-210ENST00000584400 PARP2Q9UGN5 583 aa29.9■■■□□ 2.38
SMARCD2-210ENST00000584400 SPTLC2O15270 562 aa29.89■■■□□ 2.38
SMARCD2-210ENST00000584400 PPP6R2O75170 966 aa29.89■■■□□ 2.38
SMARCD2-210ENST00000584400 YEATS4O95619 227 aa29.89■■■□□ 2.38
SMARCD2-210ENST00000584400 POMCP01189 267 aa29.89■■■□□ 2.38
SMARCD2-210ENST00000584400 GALTP07902 379 aa29.89■■■□□ 2.38
SMARCD2-210ENST00000584400 TFF2Q03403 129 aa29.89■■■□□ 2.38
SMARCD2-210ENST00000584400 STRN3Q13033 797 aa29.89■■■□□ 2.38
SMARCD2-210ENST00000584400 FOXD4L5Q5VV16 416 aaPredicted RBP29.89■■■□□ 2.38
SMARCD2-210ENST00000584400 RRAGBQ5VZM2 374 aa29.89■■■□□ 2.38
SMARCD2-210ENST00000584400 CCDC73Q6ZRK6 1079 aa29.89■■■□□ 2.38
SMARCD2-210ENST00000584400 FOXD4L4Q8WXT5 416 aaPredicted RBP29.89■■■□□ 2.38
SMARCD2-210ENST00000584400 ENTPD7Q9NQZ7 604 aa29.89■■■□□ 2.38
SMARCD2-210ENST00000584400 TRANK1O15050 2925 aa29.89■■■□□ 2.38
SMARCD2-210ENST00000584400 IRS1P35568 1242 aa29.88■■■□□ 2.37
SMARCD2-210ENST00000584400 MCM6Q14566 821 aa29.88■■■□□ 2.37
SMARCD2-210ENST00000584400 ARSHQ5FYA8 562 aa29.88■■■□□ 2.37
SMARCD2-210ENST00000584400 RPS6KC1Q96S38 1066 aa29.88■■■□□ 2.37
SMARCD2-210ENST00000584400 TCF25Q9BQ70 676 aa29.88■■■□□ 2.37
SMARCD2-210ENST00000584400 TNFSF13BQ9Y275 285 aa29.88■■■□□ 2.37
SMARCD2-210ENST00000584400 EYSQ5T1H1 3165 aa29.87■■■□□ 2.37
SMARCD2-210ENST00000584400 NT5C1B-RDH14C9J2C7 533 aa29.87■■■□□ 2.37
SMARCD2-210ENST00000584400 SLC16A4O15374 487 aa29.87■■■□□ 2.37
SMARCD2-210ENST00000584400 FAM13AO94988 1023 aa29.87■■■□□ 2.37
SMARCD2-210ENST00000584400 AKAP5P24588 427 aa29.87■■■□□ 2.37
SMARCD2-210ENST00000584400 HYAL1Q12794 435 aa29.87■■■□□ 2.37
SMARCD2-210ENST00000584400 BECN1Q14457 450 aa29.87■■■□□ 2.37
SMARCD2-210ENST00000584400 COL19A1Q14993 1142 aa29.87■■■□□ 2.37
SMARCD2-210ENST00000584400 NT5DC1Q5TFE4 455 aa29.87■■■□□ 2.37
SMARCD2-210ENST00000584400 EP400NLQ6ZTU2 488 aa29.87■■■□□ 2.37
SMARCD2-210ENST00000584400 TMC7Q7Z402 723 aa29.87■■■□□ 2.37
SMARCD2-210ENST00000584400 IGSF21Q96ID5 467 aa29.87■■■□□ 2.37
SMARCD2-210ENST00000584400 CDCA3Q99618 268 aaPredicted RBP29.87■■■□□ 2.37
SMARCD2-210ENST00000584400 REEP2Q9BRK0 252 aa29.87■■■□□ 2.37
SMARCD2-210ENST00000584400 TLE6Q9H808 572 aa29.87■■■□□ 2.37
SMARCD2-210ENST00000584400 CLDND1Q9NY35 253 aa29.87■■■□□ 2.37
SMARCD2-210ENST00000584400 TFIP11Q9UBB9 837 aaKnown RBP29.87■■■□□ 2.37
SMARCD2-210ENST00000584400 CFAP45Q9UL16 551 aa29.87■■■□□ 2.37
SMARCD2-210ENST00000584400 FAN1Q9Y2M0 1017 aa29.87■■■□□ 2.37
SMARCD2-210ENST00000584400 KIAA1671Q9BY89 1806 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms