RNA–Protein interactions for RNA: ENST00000583908.1

NARF-222, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-222	ENST00000583908	NOMO2	Q5JPE7	1267 aa		10.88	□□□□□ -0.67
NARF-222	ENST00000583908	RESP18	Q5W5W9	173 aa		10.88	□□□□□ -0.67
NARF-222	ENST00000583908	ADAL	Q6DHV7	355 aa		10.88	□□□□□ -0.67
NARF-222	ENST00000583908	ZPBP2	Q6X784	338 aa		10.88	□□□□□ -0.67
NARF-222	ENST00000583908	ZNF598	Q86UK7	904 aa	Known RBP	10.88	□□□□□ -0.67
NARF-222	ENST00000583908	THNSL1	Q8IYQ7	743 aa		10.88	□□□□□ -0.67
NARF-222	ENST00000583908	DAW1	Q8N136	415 aa		10.88	□□□□□ -0.67
NARF-222	ENST00000583908	HELQ	Q8TDG4	1101 aa		10.88	□□□□□ -0.67
NARF-222	ENST00000583908	MYLIP	Q8WY64	445 aa		10.88	□□□□□ -0.67
NARF-222	ENST00000583908	DDX12P	Q92771	950 aa		10.88	□□□□□ -0.67
NARF-222	ENST00000583908	P2RX5	Q93086	422 aa		10.88	□□□□□ -0.67
NARF-222	ENST00000583908	CCDC47	Q96A33	483 aa	Known RBP	10.88	□□□□□ -0.67
NARF-222	ENST00000583908	HVCN1	Q96D96	273 aa		10.88	□□□□□ -0.67
NARF-222	ENST00000583908	ZNF558	Q96NG5	402 aa		10.88	□□□□□ -0.67
NARF-222	ENST00000583908	GUCD1	Q96NT3	240 aa		10.88	□□□□□ -0.67
NARF-222	ENST00000583908	NTPCR	Q9BSD7	190 aa	Known RBP	10.88	□□□□□ -0.67
NARF-222	ENST00000583908	TCHP	Q9BT92	498 aa		10.88	□□□□□ -0.67
NARF-222	ENST00000583908	KIFC3	Q9BVG8	833 aa		10.88	□□□□□ -0.67
NARF-222	ENST00000583908	CCDC94	Q9BW85	323 aa	Predicted RBP	10.88	□□□□□ -0.67
NARF-222	ENST00000583908	CCDC113	Q9H0I3	377 aa		10.88	□□□□□ -0.67
NARF-222	ENST00000583908	CERS4	Q9HA82	394 aa		10.88	□□□□□ -0.67
NARF-222	ENST00000583908	TOPORS	Q9NS56	1045 aa	Predicted RBP	10.88	□□□□□ -0.67
NARF-222	ENST00000583908	PUF60	Q9UHX1	559 aa	Known RBP	10.88	□□□□□ -0.67
NARF-222	ENST00000583908	KCNH3	Q9ULD8	1083 aa		10.88	□□□□□ -0.67
NARF-222	ENST00000583908	PCDHA7	Q9UN72	937 aa		10.88	□□□□□ -0.67
NARF-222	ENST00000583908	EXOC7	Q9UPT5	735 aa		10.88	□□□□□ -0.67
NARF-222	ENST00000583908	INPP5F	Q9Y2H2	1132 aa		10.88	□□□□□ -0.67
NARF-222	ENST00000583908	IPP	Q9Y573	584 aa		10.88	□□□□□ -0.67
NARF-222	ENST00000583908	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	10.88	□□□□□ -0.67
NARF-222	ENST00000583908	MRPL42	Q9Y6G3	142 aa	Known RBP	10.88	□□□□□ -0.67
NARF-222	ENST00000583908	PTPRS	Q13332	1948 aa		10.88	□□□□□ -0.67
NARF-222	ENST00000583908	RALGAPA2	Q2PPJ7	1873 aa		10.87	□□□□□ -0.67
NARF-222	ENST00000583908	HNRNPDL	O14979	420 aa	Known RBP	10.87	□□□□□ -0.67
NARF-222	ENST00000583908	POLR2D	O15514	142 aa	Known RBP	10.87	□□□□□ -0.67
NARF-222	ENST00000583908	B4GALT5	O43286	388 aa		10.87	□□□□□ -0.67
NARF-222	ENST00000583908	SLC34A2	O95436	690 aa		10.87	□□□□□ -0.67
NARF-222	ENST00000583908	MYL1	P05976	194 aa		10.87	□□□□□ -0.67
NARF-222	ENST00000583908	IDE	P14735	1019 aa		10.87	□□□□□ -0.67
NARF-222	ENST00000583908	CMA1	P23946	247 aa		10.87	□□□□□ -0.67
NARF-222	ENST00000583908	HOXA11	P31270	313 aa	Predicted RBP	10.87	□□□□□ -0.67
NARF-222	ENST00000583908	ALDH7A1	P49419	539 aa	Known RBP	10.87	□□□□□ -0.67
NARF-222	ENST00000583908	LIG4	P49917	911 aa		10.87	□□□□□ -0.67
NARF-222	ENST00000583908	ZNF131	P52739	623 aa		10.87	□□□□□ -0.67
NARF-222	ENST00000583908	NCKAP1L	P55160	1127 aa		10.87	□□□□□ -0.67
NARF-222	ENST00000583908	CACNB1	Q02641	598 aa	Predicted RBP	10.87	□□□□□ -0.67
NARF-222	ENST00000583908	MAPK7	Q13164	816 aa		10.87	□□□□□ -0.67
NARF-222	ENST00000583908	GPM6B	Q13491	265 aa		10.87	□□□□□ -0.67
NARF-222	ENST00000583908	GIT2	Q14161	759 aa		10.87	□□□□□ -0.67
NARF-222	ENST00000583908	HSP90AA2P	Q14568	343 aa	Predicted RBP	10.87	□□□□□ -0.67
NARF-222	ENST00000583908	SHC4	Q6S5L8	630 aa		10.87	□□□□□ -0.67
NARF-222	ENST00000583908	MPZL3	Q6UWV2	235 aa		10.87	□□□□□ -0.67
NARF-222	ENST00000583908	USP49	Q70CQ1	688 aa		10.87	□□□□□ -0.67
NARF-222	ENST00000583908	DYM	Q7RTS9	669 aa		10.87	□□□□□ -0.67
NARF-222	ENST00000583908	MRPL10	Q7Z7H8	261 aa	Known RBP	10.87	□□□□□ -0.67
NARF-222	ENST00000583908	CRIPAK	Q8N1N5	446 aa		10.87	□□□□□ -0.67
NARF-222	ENST00000583908	MAFA	Q8NHW3	353 aa	Predicted RBP	10.87	□□□□□ -0.67
NARF-222	ENST00000583908	GDPD5	Q8WTR4	605 aa		10.87	□□□□□ -0.67
NARF-222	ENST00000583908	MRPS27	Q92552	414 aa	Known RBP	10.87	□□□□□ -0.67
NARF-222	ENST00000583908	KCNN1	Q92952	543 aa		10.87	□□□□□ -0.67
NARF-222	ENST00000583908	C17orf80	Q9BSJ5	609 aa		10.87	□□□□□ -0.67
NARF-222	ENST00000583908	PDZD7	Q9H5P4	517 aa		10.87	□□□□□ -0.67
NARF-222	ENST00000583908	MRPL44	Q9H9J2	332 aa	Known RBP	10.87	□□□□□ -0.67
NARF-222	ENST00000583908	TNFSF13B	Q9Y275	285 aa		10.87	□□□□□ -0.67
NARF-222	ENST00000583908	NPHP3-ACAD11	A0A0J9YXS1	232 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908		A0A1W2PQ27	194 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908		A0A1W2PQ64	194 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908		A0A1W2PQD8	194 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	SFI1	A8K8P3	1242 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908		H3BNC9	293 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	LPXN	O60711	386 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	TOM1L1	O75674	476 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	MCF2	P10911	925 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	ATF7	P17544	494 aa	Predicted RBP	10.86	□□□□□ -0.67
NARF-222	ENST00000583908	MLH1	P40692	756 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	SYK	P43405	635 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	ASIC1	P78348	528 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	NOLC1	Q14978	699 aa	Known RBP eCLIP	10.86	□□□□□ -0.67	2e-8	■□□□□ 8.8
NARF-222	ENST00000583908	ARSH	Q5FYA8	562 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	HERC4	Q5GLZ8	1057 aa	Predicted RBP	10.86	□□□□□ -0.67
NARF-222	ENST00000583908	CLLU1OS	Q5K130	101 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	UBXN11	Q5T124	520 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	AXDND1	Q5T1B0	1012 aa	Predicted RBP	10.86	□□□□□ -0.67
NARF-222	ENST00000583908	HAUS6	Q7Z4H7	955 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	MICALL1	Q8N3F8	863 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	COLGALT1	Q8NBJ5	622 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	TMEM161B	Q8NDZ6	487 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	MRPL38	Q96DV4	380 aa	Known RBP	10.86	□□□□□ -0.67
NARF-222	ENST00000583908	TMEM169	Q96HH4	297 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	CASD1	Q96PB1	797 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	TMEM175	Q9BSA9	504 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	APOL6	Q9BWW8	343 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	EIF2A	Q9BY44	585 aa	Known RBP	10.86	□□□□□ -0.67
NARF-222	ENST00000583908	PANK2	Q9BZ23	570 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	NXF3	Q9H4D5	531 aa	Known RBP	10.86	□□□□□ -0.67
NARF-222	ENST00000583908	OLFML3	Q9NRN5	406 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	TYW1	Q9NV66	732 aa	Known RBP	10.86	□□□□□ -0.67
NARF-222	ENST00000583908	CHMP5	Q9NZZ3	219 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	ANKFY1	Q9P2R3	1169 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	PARP2	Q9UGN5	583 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	HOOK1	Q9UJC3	728 aa	Known RBP	10.86	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms