RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 NPR3P17342 541 aa22.83■■□□□ 1.25
SRSF1-206ENST00000583741 PDCP20941 246 aa22.83■■□□□ 1.25
SRSF1-206ENST00000583741 NONOQ15233 471 aaKnown RBP eCLIP22.83■■□□□ 1.25
SRSF1-206ENST00000583741 INF2Q27J81 1249 aa22.83■■□□□ 1.25
SRSF1-206ENST00000583741 PRPF31Q8WWY3 499 aaKnown RBP22.83■■□□□ 1.25
SRSF1-206ENST00000583741 SLC7A3Q8WY07 619 aa22.83■■□□□ 1.25
SRSF1-206ENST00000583741 TMEM143Q96AN5 459 aa22.83■■□□□ 1.25
SRSF1-206ENST00000583741 KCNK12Q9HB15 430 aa22.83■■□□□ 1.25
SRSF1-206ENST00000583741 BMP2KQ9NSY1 1161 aaPredicted RBP22.83■■□□□ 1.25
SRSF1-206ENST00000583741 FRYLO94915 3013 aa22.83■■□□□ 1.24
SRSF1-206ENST00000583741 NRP1O14786 923 aa22.82■■□□□ 1.24
SRSF1-206ENST00000583741 N4BP1O75113 896 aaKnown RBP22.82■■□□□ 1.24
SRSF1-206ENST00000583741 DEXIO95424 95 aa22.82■■□□□ 1.24
SRSF1-206ENST00000583741 FDPSP14324 419 aaKnown RBP22.82■■□□□ 1.24
SRSF1-206ENST00000583741 QARSP47897 775 aaKnown RBP22.82■■□□□ 1.24
SRSF1-206ENST00000583741 PPP2R5CQ13362 524 aa22.82■■□□□ 1.24
SRSF1-206ENST00000583741 TDGQ13569 410 aa22.82■■□□□ 1.24
SRSF1-206ENST00000583741 LETM2Q2VYF4 491 aa22.82■■□□□ 1.24
SRSF1-206ENST00000583741 TMEM175Q9BSA9 504 aa22.82■■□□□ 1.24
SRSF1-206ENST00000583741 DHX33Q9H6R0 707 aaKnown RBP22.82■■□□□ 1.24
SRSF1-206ENST00000583741 MRPL17Q9NRX2 175 aaKnown RBP22.82■■□□□ 1.24
SRSF1-206ENST00000583741 MARCH5Q9NX47 278 aa22.82■■□□□ 1.24
SRSF1-206ENST00000583741 DUSP12Q9UNI6 340 aa22.82■■□□□ 1.24
SRSF1-206ENST00000583741 FAN1Q9Y2M0 1017 aa22.82■■□□□ 1.24
SRSF1-206ENST00000583741 CNTNAP2Q9UHC6 1331 aa22.82■■□□□ 1.24
SRSF1-206ENST00000583741 DMXL1Q9Y485 3027 aa22.81■■□□□ 1.24
SRSF1-206ENST00000583741 DOCK8Q8NF50 2099 aa22.81■■□□□ 1.24
SRSF1-206ENST00000583741 C2CD2LO14523 706 aa22.81■■□□□ 1.24
SRSF1-206ENST00000583741 SRGAP2CP0DJJ0 459 aa22.81■■□□□ 1.24
SRSF1-206ENST00000583741 AOC1P19801 751 aa22.81■■□□□ 1.24
SRSF1-206ENST00000583741 NUCB2P80303 420 aa22.81■■□□□ 1.24
SRSF1-206ENST00000583741 C15orf39Q6ZRI6 1047 aa22.81■■□□□ 1.24
SRSF1-206ENST00000583741 SRGAP1Q7Z6B7 1085 aa22.81■■□□□ 1.24
SRSF1-206ENST00000583741 CEP170P1Q96L14 293 aa22.81■■□□□ 1.24
SRSF1-206ENST00000583741 FAM193BQ96PV7 902 aaPredicted RBP22.81■■□□□ 1.24
SRSF1-206ENST00000583741 KCNMB3Q9NPA1 279 aa22.81■■□□□ 1.24
SRSF1-206ENST00000583741 MAN1C1Q9NR34 630 aa22.81■■□□□ 1.24
SRSF1-206ENST00000583741 STK39Q9UEW8 545 aa22.81■■□□□ 1.24
SRSF1-206ENST00000583741 TDRD15B5MCY1 1934 aaKnown RBP22.81■■□□□ 1.24
SRSF1-206ENST00000583741 ALDH2P05091 517 aa22.8■■□□□ 1.24
SRSF1-206ENST00000583741 SYT1P21579 422 aa22.8■■□□□ 1.24
SRSF1-206ENST00000583741 LAMTOR4Q0VGL1 99 aa22.8■■□□□ 1.24
SRSF1-206ENST00000583741 LARP1BQ659C4 914 aaKnown RBP22.8■■□□□ 1.24
SRSF1-206ENST00000583741 TAS1R1Q7RTX1 841 aa22.8■■□□□ 1.24
SRSF1-206ENST00000583741 SMG8Q8ND04 991 aaKnown RBP22.8■■□□□ 1.24
SRSF1-206ENST00000583741 PSPC1Q8WXF1 523 aaKnown RBP22.8■■□□□ 1.24
SRSF1-206ENST00000583741 KANSL3Q9P2N6 904 aa22.8■■□□□ 1.24
SRSF1-206ENST00000583741 PRG3Q9Y2Y8 225 aaPredicted RBP22.8■■□□□ 1.24
SRSF1-206ENST00000583741 NARSO43776 548 aaKnown RBP22.79■■□□□ 1.24
SRSF1-206ENST00000583741 SOD2P04179 222 aa22.79■■□□□ 1.24
SRSF1-206ENST00000583741 NCLP19338 710 aaKnown RBP22.79■■□□□ 1.24
SRSF1-206ENST00000583741 KRT25Q7Z3Z0 450 aa22.79■■□□□ 1.24
SRSF1-206ENST00000583741 NKD2Q969F2 451 aaPredicted RBP22.79■■□□□ 1.24
SRSF1-206ENST00000583741 HERC2P3Q9BVR0 1158 aa22.79■■□□□ 1.24
SRSF1-206ENST00000583741 KCNJ14Q9UNX9 436 aa22.79■■□□□ 1.24
SRSF1-206ENST00000583741 F8W810 466 aa22.79■■□□□ 1.24
SRSF1-206ENST00000583741 TEX28O15482 410 aa22.79■■□□□ 1.24
SRSF1-206ENST00000583741 STX6O43752 255 aa22.79■■□□□ 1.24
SRSF1-206ENST00000583741 EFEMP2O95967 443 aa22.79■■□□□ 1.24
SRSF1-206ENST00000583741 URODP06132 367 aa22.79■■□□□ 1.24
SRSF1-206ENST00000583741 P4HBP07237 508 aaKnown RBP22.79■■□□□ 1.24
SRSF1-206ENST00000583741 PDIA4P13667 645 aaKnown RBP22.79■■□□□ 1.24
SRSF1-206ENST00000583741 PKP1Q13835 747 aa22.79■■□□□ 1.24
SRSF1-206ENST00000583741 GALNT17Q6IS24 598 aa22.79■■□□□ 1.24
SRSF1-206ENST00000583741 CCDC105Q8IYK2 499 aa22.79■■□□□ 1.24
SRSF1-206ENST00000583741 RNF168Q8IYW5 571 aaPredicted RBP22.79■■□□□ 1.24
SRSF1-206ENST00000583741 SIX5Q8N196 739 aa22.79■■□□□ 1.24
SRSF1-206ENST00000583741 RNF149Q8NC42 400 aa22.79■■□□□ 1.24
SRSF1-206ENST00000583741 CMASQ8NFW8 434 aaPredicted RBP22.79■■□□□ 1.24
SRSF1-206ENST00000583741 WASF1Q92558 559 aa22.79■■□□□ 1.24
SRSF1-206ENST00000583741 RPS6KC1Q96S38 1066 aa22.79■■□□□ 1.24
SRSF1-206ENST00000583741 LXNQ9BS40 222 aa22.79■■□□□ 1.24
SRSF1-206ENST00000583741 RNF39Q9H2S5 420 aa22.79■■□□□ 1.24
SRSF1-206ENST00000583741 DNAH14Q0VDD8 3507 aa22.78■■□□□ 1.24
SRSF1-206ENST00000583741 EP300Q09472 2414 aaPredicted RBP22.78■■□□□ 1.24
SRSF1-206ENST00000583741 MYBP10242 640 aa22.78■■□□□ 1.24
SRSF1-206ENST00000583741 RFC5P40937 340 aa22.78■■□□□ 1.24
SRSF1-206ENST00000583741 EMC2Q15006 297 aa22.78■■□□□ 1.24
SRSF1-206ENST00000583741 COLGALT2Q8IYK4 626 aa22.78■■□□□ 1.24
SRSF1-206ENST00000583741 RSAD2Q8WXG1 361 aa22.78■■□□□ 1.24
SRSF1-206ENST00000583741 FAM20AQ96MK3 541 aa22.78■■□□□ 1.24
SRSF1-206ENST00000583741 EIF2AQ9BY44 585 aaKnown RBP22.78■■□□□ 1.24
SRSF1-206ENST00000583741 FBXL21Q9UKT6 434 aa22.78■■□□□ 1.24
SRSF1-206ENST00000583741 IPPQ9Y573 584 aa22.78■■□□□ 1.24
SRSF1-206ENST00000583741 MTCL1Q9Y4B5 1905 aaKnown RBP22.77■■□□□ 1.24
SRSF1-206ENST00000583741 ZBTB39O15060 712 aa22.77■■□□□ 1.24
SRSF1-206ENST00000583741 YWHABP31946 246 aaKnown RBP22.77■■□□□ 1.24
SRSF1-206ENST00000583741 FERMT3Q86UX7 667 aa22.77■■□□□ 1.24
SRSF1-206ENST00000583741 FAM177A1Q8N128 213 aaPredicted RBP22.77■■□□□ 1.24
SRSF1-206ENST00000583741 HAS1Q92839 578 aa22.77■■□□□ 1.24
SRSF1-206ENST00000583741 RGL1Q9NZL6 768 aa22.77■■□□□ 1.24
SRSF1-206ENST00000583741 IGSF9Q9P2J2 1179 aa22.77■■□□□ 1.24
SRSF1-206ENST00000583741 HES2Q9Y543 173 aa22.77■■□□□ 1.24
SRSF1-206ENST00000583741 PPME1Q9Y570 386 aa22.77■■□□□ 1.24
SRSF1-206ENST00000583741 CCDC195A0A1B0GUA6 201 aa22.76■■□□□ 1.23
SRSF1-206ENST00000583741 VPS37CA5D8V6 355 aaPredicted RBP22.76■■□□□ 1.23
SRSF1-206ENST00000583741 ARL5CA6NH57 179 aa22.76■■□□□ 1.23
SRSF1-206ENST00000583741 TSPAN1O60635 241 aa22.76■■□□□ 1.23
SRSF1-206ENST00000583741 DKC1O60832 514 aaKnown RBP eCLIP22.76■■□□□ 1.23
SRSF1-206ENST00000583741 RFPL2O75678 378 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms