RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 CAGE1Q8TC20 777 aa17.92■□□□□ 0.46
CDK5RAP3-228ENST00000583363 MRPL4Q9BYD3 311 aaKnown RBP17.92■□□□□ 0.46
CDK5RAP3-228ENST00000583363 CGNQ9P2M7 1197 aaKnown RBP17.92■□□□□ 0.46
CDK5RAP3-228ENST00000583363 USP20Q9Y2K6 914 aa17.92■□□□□ 0.46
CDK5RAP3-228ENST00000583363 TTLL13PA6NNM8 815 aa17.91■□□□□ 0.46
CDK5RAP3-228ENST00000583363 ANKRD63C9JTQ0 380 aa17.91■□□□□ 0.46
CDK5RAP3-228ENST00000583363 CTSHP09668 335 aa17.91■□□□□ 0.46
CDK5RAP3-228ENST00000583363 MYL5Q02045 173 aa17.91■□□□□ 0.46
CDK5RAP3-228ENST00000583363 BFSP2Q13515 415 aa17.91■□□□□ 0.46
CDK5RAP3-228ENST00000583363 PRPF4BQ13523 1007 aaKnown RBP17.91■□□□□ 0.46
CDK5RAP3-228ENST00000583363 EDRF1Q3B7T1 1238 aa17.91■□□□□ 0.46
CDK5RAP3-228ENST00000583363 C9orf50Q5SZB4 431 aa17.91■□□□□ 0.46
CDK5RAP3-228ENST00000583363 SLC39A4Q6P5W5 647 aa17.91■□□□□ 0.46
CDK5RAP3-228ENST00000583363 TRAF7Q6Q0C0 670 aa17.91■□□□□ 0.46
CDK5RAP3-228ENST00000583363 ZPBP2Q6X784 338 aa17.91■□□□□ 0.46
CDK5RAP3-228ENST00000583363 HS2ST1Q7LGA3 356 aa17.91■□□□□ 0.46
CDK5RAP3-228ENST00000583363 LUZP1Q86V48 1076 aa17.91■□□□□ 0.46
CDK5RAP3-228ENST00000583363 AOPEPQ8N6M6 819 aa17.91■□□□□ 0.46
CDK5RAP3-228ENST00000583363 RNF214Q8ND24 703 aa17.91■□□□□ 0.46
CDK5RAP3-228ENST00000583363 TMEM174Q8WUU8 243 aa17.91■□□□□ 0.46
CDK5RAP3-228ENST00000583363 TMEM40Q8WWA1 233 aa17.91■□□□□ 0.46
CDK5RAP3-228ENST00000583363 PRIMPOLQ96LW4 560 aa17.91■□□□□ 0.46
CDK5RAP3-228ENST00000583363 ACO2Q99798 780 aaKnown RBP17.91■□□□□ 0.46
CDK5RAP3-228ENST00000583363 TARS2Q9BW92 718 aaKnown RBP17.91■□□□□ 0.46
CDK5RAP3-228ENST00000583363 AGPAT3Q9NRZ7 376 aa17.91■□□□□ 0.46
CDK5RAP3-228ENST00000583363 STYXL1Q9Y6J8 313 aa17.91■□□□□ 0.46
CDK5RAP3-228ENST00000583363 BECN2A8MW95 431 aa17.9■□□□□ 0.46
CDK5RAP3-228ENST00000583363 CLIC2O15247 247 aa17.9■□□□□ 0.46
CDK5RAP3-228ENST00000583363 ADSSP30520 456 aa17.9■□□□□ 0.46
CDK5RAP3-228ENST00000583363 FKBP3Q00688 224 aaKnown RBP17.9■□□□□ 0.46
CDK5RAP3-228ENST00000583363 MYBPC2Q14324 1141 aa17.9■□□□□ 0.46
CDK5RAP3-228ENST00000583363 ZNF697Q5TEC3 545 aa17.9■□□□□ 0.46
CDK5RAP3-228ENST00000583363 TSHZ1Q6ZSZ6 1077 aa17.9■□□□□ 0.46
CDK5RAP3-228ENST00000583363 C12orf56Q8IXR9 622 aa17.9■□□□□ 0.46
CDK5RAP3-228ENST00000583363 ZC3H3Q8IXZ2 948 aaKnown RBP17.9■□□□□ 0.46
CDK5RAP3-228ENST00000583363 CCDC155Q8N6L0 562 aa17.9■□□□□ 0.46
CDK5RAP3-228ENST00000583363 BICD1Q96G01 975 aa17.9■□□□□ 0.46
CDK5RAP3-228ENST00000583363 SRRTQ9BXP5 876 aaKnown RBP17.9■□□□□ 0.46
CDK5RAP3-228ENST00000583363 PRDM5Q9NQX1 630 aaPredicted RBP17.9■□□□□ 0.46
CDK5RAP3-228ENST00000583363 DMAC2Q9NW81 257 aa17.9■□□□□ 0.46
CDK5RAP3-228ENST00000583363 NOC2LQ9Y3T9 749 aaKnown RBP17.9■□□□□ 0.46
CDK5RAP3-228ENST00000583363 NFE2L3Q9Y4A8 694 aa17.9■□□□□ 0.46
CDK5RAP3-228ENST00000583363 SQORQ9Y6N5 450 aa17.9■□□□□ 0.46
CDK5RAP3-228ENST00000583363 VCANP13611 3396 aa17.89■□□□□ 0.45
CDK5RAP3-228ENST00000583363 TISP43B9A030 160 aa17.89■□□□□ 0.45
CDK5RAP3-228ENST00000583363 B4GALT5O43286 388 aa17.89■□□□□ 0.45
CDK5RAP3-228ENST00000583363 TSPAN1O60635 241 aa17.89■□□□□ 0.45
CDK5RAP3-228ENST00000583363 SELPP16109 830 aa17.89■□□□□ 0.45
CDK5RAP3-228ENST00000583363 FGFR4P22455 802 aa17.89■□□□□ 0.45
CDK5RAP3-228ENST00000583363 RPL13P26373 211 aaKnown RBP17.89■□□□□ 0.45
CDK5RAP3-228ENST00000583363 LIG4P49917 911 aa17.89■□□□□ 0.45
CDK5RAP3-228ENST00000583363 ADAM9Q13443 819 aa17.89■□□□□ 0.45
CDK5RAP3-228ENST00000583363 TPD52L1Q16890 204 aaPredicted RBP17.89■□□□□ 0.45
CDK5RAP3-228ENST00000583363 FBXO47Q5MNV8 452 aa17.89■□□□□ 0.45
CDK5RAP3-228ENST00000583363 SLFN12LQ6IEE8 588 aa17.89■□□□□ 0.45
CDK5RAP3-228ENST00000583363 SLC9A9Q8IVB4 645 aa17.89■□□□□ 0.45
CDK5RAP3-228ENST00000583363 CSGALNACT2Q8N6G5 542 aa17.89■□□□□ 0.45
CDK5RAP3-228ENST00000583363 BADQ92934 168 aa17.89■□□□□ 0.45
CDK5RAP3-228ENST00000583363 ZBTB45Q96K62 511 aaPredicted RBP17.89■□□□□ 0.45
CDK5RAP3-228ENST00000583363 NOC4LQ9BVI4 516 aaKnown RBP17.89■□□□□ 0.45
CDK5RAP3-228ENST00000583363 HSD3B7Q9H2F3 369 aa17.89■□□□□ 0.45
CDK5RAP3-228ENST00000583363 PTPRHQ9HD43 1115 aa17.89■□□□□ 0.45
CDK5RAP3-228ENST00000583363 FANCLQ9NW38 375 aa17.89■□□□□ 0.45
CDK5RAP3-228ENST00000583363 TNFSF13BQ9Y275 285 aa17.89■□□□□ 0.45
CDK5RAP3-228ENST00000583363 PRUNE2Q8WUY3 3088 aa17.89■□□□□ 0.45
CDK5RAP3-228ENST00000583363 CDH23Q9H251 3354 aa17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 TRIM43BA6NCK2 446 aa17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 PITPNM1O00562 1244 aa17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 HNRNPDLO14979 420 aaKnown RBP17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 RPS6KA5O75582 802 aa17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 TOM1L1O75674 476 aa17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 ERLIN2O94905 339 aa17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 FGFR1OPO95684 399 aaKnown RBP17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 NR3C1P04150 777 aa17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 ARF4P18085 180 aaPredicted RBP17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 GARTP22102 1010 aa17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 PROZP22891 400 aa17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 SFPQP23246 707 aaKnown RBP eCLIP17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 AXLP30530 894 aa17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 HOXA11P31270 313 aaPredicted RBP17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 ATF7IP2Q5U623 682 aa17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 CATSPER4Q7RTX7 472 aa17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 FILIP1Q7Z7B0 1213 aa17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 FAM228AQ86W67 206 aa17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 NOC3LQ8WTT2 800 aaKnown RBP17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 TRIM43Q96BQ3 446 aaPredicted RBP17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 CEP63Q96MT8 703 aa17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 CDX2Q99626 313 aaPredicted RBP17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 CBWD1Q9BRT8 395 aa17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 OSBPL7Q9BZF2 842 aa17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 SAMSN1Q9NSI8 373 aaKnown RBP17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 ST3GAL5Q9UNP4 418 aa17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 SIP14410 1827 aa17.88■□□□□ 0.45
CDK5RAP3-228ENST00000583363 A0A1B0GUA9 196 aa17.87■□□□□ 0.45
CDK5RAP3-228ENST00000583363 ABLIM1O14639 778 aa17.87■□□□□ 0.45
CDK5RAP3-228ENST00000583363 CETN3O15182 167 aa17.87■□□□□ 0.45
CDK5RAP3-228ENST00000583363 CLTBP09497 229 aa17.87■□□□□ 0.45
CDK5RAP3-228ENST00000583363 NR2F2P24468 414 aa17.87■□□□□ 0.45
CDK5RAP3-228ENST00000583363 NCBP1Q09161 790 aaKnown RBP17.87■□□□□ 0.45
CDK5RAP3-228ENST00000583363 LPIN1Q14693 890 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms