RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 RFC5P40937 340 aa10.81□□□□□ -0.68
CDK5RAP3-227ENST00000583352 NPEPPSP55786 919 aa10.81□□□□□ -0.68
CDK5RAP3-227ENST00000583352 NPY5RQ15761 445 aa10.81□□□□□ -0.68
CDK5RAP3-227ENST00000583352 AGMOQ6ZNB7 445 aa10.81□□□□□ -0.68
CDK5RAP3-227ENST00000583352 CCDC149Q6ZUS6 474 aa10.81□□□□□ -0.68
CDK5RAP3-227ENST00000583352 OTOP3Q7RTS5 596 aa10.81□□□□□ -0.68
CDK5RAP3-227ENST00000583352 MRPL10Q7Z7H8 261 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-227ENST00000583352 GPR149Q86SP6 731 aa10.81□□□□□ -0.68
CDK5RAP3-227ENST00000583352 FERMT3Q86UX7 667 aa10.81□□□□□ -0.68
CDK5RAP3-227ENST00000583352 ZNF280BQ86YH2 543 aa10.81□□□□□ -0.68
CDK5RAP3-227ENST00000583352 TMEM105Q8N8V8 129 aa10.81□□□□□ -0.68
CDK5RAP3-227ENST00000583352 TCP11Q8WWU5 503 aa10.81□□□□□ -0.68
CDK5RAP3-227ENST00000583352 PSPC1Q8WXF1 523 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-227ENST00000583352 AIFM3Q96NN9 605 aa10.81□□□□□ -0.68
CDK5RAP3-227ENST00000583352 KLHL5Q96PQ7 755 aa10.81□□□□□ -0.68
CDK5RAP3-227ENST00000583352 NAP1L4Q99733 375 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-227ENST00000583352 TMEM175Q9BSA9 504 aa10.81□□□□□ -0.68
CDK5RAP3-227ENST00000583352 VN1R3Q9BXE9 311 aa10.81□□□□□ -0.68
CDK5RAP3-227ENST00000583352 SMOC2Q9H3U7 446 aa10.81□□□□□ -0.68
CDK5RAP3-227ENST00000583352 GDPD2Q9HCC8 539 aa10.81□□□□□ -0.68
CDK5RAP3-227ENST00000583352 VAV3Q9UKW4 847 aa10.81□□□□□ -0.68
CDK5RAP3-227ENST00000583352 FAN1Q9Y2M0 1017 aa10.81□□□□□ -0.68
CDK5RAP3-227ENST00000583352 MYO10Q9HD67 2058 aa10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 H3BQV1 296 aa10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 ASAP2O43150 1006 aa10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 GAS2O43903 313 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 MARCH6O60337 910 aa10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 B4GALT3O60512 393 aa10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 CDKL5O76039 1030 aa10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 DDHD2O94830 711 aa10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 SRGAP2CP0DJJ0 459 aa10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 GCFC2P16383 781 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 XBP1P17861 261 aa10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 LAMTOR4Q0VGL1 99 aa10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 EPHA7Q15375 998 aa10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 ASTLQ6HA08 431 aaPredicted RBP10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 PPP4R3AQ6IN85 833 aa10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 FAM173BQ6P4H8 233 aa10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 OTUD6AQ7L8S5 288 aa10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 NEK8Q86SG6 692 aa10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 C4orf19Q8IY42 314 aa10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 CNNM3Q8NE01 707 aa10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 FBXO18Q8NFZ0 1043 aa10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 PRPF31Q8WWY3 499 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 TMEM143Q96AN5 459 aa10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 GZF1Q9H116 711 aaPredicted RBP10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 DHX33Q9H6R0 707 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 KCNMB3Q9NPA1 279 aa10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 UBN1Q9NPG3 1134 aa10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 MRPL17Q9NRX2 175 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 KCNJ14Q9UNX9 436 aa10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 SSX2IPQ9Y2D8 614 aa10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 DENND4AQ7Z401 1863 aa10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 ZDBF2Q9HCK1 2354 aa10.8□□□□□ -0.68
CDK5RAP3-227ENST00000583352 PROB1E7EW31 1015 aa10.79□□□□□ -0.68
CDK5RAP3-227ENST00000583352 NRP1O14786 923 aa10.79□□□□□ -0.68
CDK5RAP3-227ENST00000583352 TBX3O15119 743 aa10.79□□□□□ -0.68
CDK5RAP3-227ENST00000583352 CCNT1O60563 726 aaKnown RBP10.79□□□□□ -0.68
CDK5RAP3-227ENST00000583352 ERLIN2O94905 339 aa10.79□□□□□ -0.68
CDK5RAP3-227ENST00000583352 POMCP01189 267 aa10.79□□□□□ -0.68
CDK5RAP3-227ENST00000583352 SOD2P04179 222 aa10.79□□□□□ -0.68
CDK5RAP3-227ENST00000583352 URODP06132 367 aa10.79□□□□□ -0.68
CDK5RAP3-227ENST00000583352 CNPP09543 421 aaKnown RBP10.79□□□□□ -0.68
CDK5RAP3-227ENST00000583352 ITGA4P13612 1032 aa10.79□□□□□ -0.68
CDK5RAP3-227ENST00000583352 NCLP19338 710 aaKnown RBP10.79□□□□□ -0.68
CDK5RAP3-227ENST00000583352 YWHABP31946 246 aaKnown RBP10.79□□□□□ -0.68
CDK5RAP3-227ENST00000583352 CLCN4P51793 760 aa10.79□□□□□ -0.68
CDK5RAP3-227ENST00000583352 EMC2Q15006 297 aa10.79□□□□□ -0.68
CDK5RAP3-227ENST00000583352 UBXN11Q5T124 520 aa10.79□□□□□ -0.68
CDK5RAP3-227ENST00000583352 NCAPH2Q6IBW4 605 aa10.79□□□□□ -0.68
CDK5RAP3-227ENST00000583352 ELMSAN1Q6PJG2 1045 aa10.79□□□□□ -0.68
CDK5RAP3-227ENST00000583352 ZNF579Q8NAF0 562 aaKnown RBP10.79□□□□□ -0.68
CDK5RAP3-227ENST00000583352 RNF149Q8NC42 400 aa10.79□□□□□ -0.68
CDK5RAP3-227ENST00000583352 LXNQ9BS40 222 aa10.79□□□□□ -0.68
CDK5RAP3-227ENST00000583352 PHF20Q9BVI0 1012 aa10.79□□□□□ -0.68
CDK5RAP3-227ENST00000583352 HERC2P3Q9BVR0 1158 aa10.79□□□□□ -0.68
CDK5RAP3-227ENST00000583352 MINDY3Q9H8M7 445 aa10.79□□□□□ -0.68
CDK5RAP3-227ENST00000583352 BMP2KQ9NSY1 1161 aaPredicted RBP10.79□□□□□ -0.68
CDK5RAP3-227ENST00000583352 C2CD2LO14523 706 aa10.78□□□□□ -0.68
CDK5RAP3-227ENST00000583352 LILRB3O75022 631 aa10.78□□□□□ -0.68
CDK5RAP3-227ENST00000583352 MBD3O95983 291 aa10.78□□□□□ -0.68
CDK5RAP3-227ENST00000583352 ADH1AP07327 375 aa10.78□□□□□ -0.68
CDK5RAP3-227ENST00000583352 AXLP30530 894 aa10.78□□□□□ -0.68
CDK5RAP3-227ENST00000583352 HOXA11P31270 313 aaPredicted RBP10.78□□□□□ -0.68
CDK5RAP3-227ENST00000583352 OR1G1P47890 313 aa10.78□□□□□ -0.68
CDK5RAP3-227ENST00000583352 CLCN5P51795 746 aa10.78□□□□□ -0.68
CDK5RAP3-227ENST00000583352 AFF1P51825 1210 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-227ENST00000583352 UBE2HP62256 183 aa10.78□□□□□ -0.68
CDK5RAP3-227ENST00000583352 NCBP1Q09161 790 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-227ENST00000583352 TDGQ13569 410 aa10.78□□□□□ -0.68
CDK5RAP3-227ENST00000583352 TFDP1Q14186 410 aa10.78□□□□□ -0.68
CDK5RAP3-227ENST00000583352 PCBP1Q15365 356 aaKnown RBP eCLIP10.78□□□□□ -0.68
CDK5RAP3-227ENST00000583352 XKR9Q5GH70 373 aa10.78□□□□□ -0.68
CDK5RAP3-227ENST00000583352 ATL3Q6DD88 541 aa10.78□□□□□ -0.68
CDK5RAP3-227ENST00000583352 C15orf39Q6ZRI6 1047 aa10.78□□□□□ -0.68
CDK5RAP3-227ENST00000583352 PIK3AP1Q6ZUJ8 805 aa10.78□□□□□ -0.68
CDK5RAP3-227ENST00000583352 SMG8Q8ND04 991 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-227ENST00000583352 FLCNQ8NFG4 579 aa10.78□□□□□ -0.68
CDK5RAP3-227ENST00000583352 CMASQ8NFW8 434 aaPredicted RBP10.78□□□□□ -0.68
CDK5RAP3-227ENST00000583352 FEZF2Q8TBJ5 459 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms