RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.91□□□□□ -1.46
SMCHD1-208ENST00000583344 ZCCHC6Q5VYS8 1495 aaKnown RBP5.9□□□□□ -1.46
SMCHD1-208ENST00000583344 A0A1W2PR48 441 aa5.9□□□□□ -1.46
SMCHD1-208ENST00000583344 CLEC2LP0C7M8 214 aa5.9□□□□□ -1.46
SMCHD1-208ENST00000583344 ADCYAP1R1P41586 468 aa5.9□□□□□ -1.46
SMCHD1-208ENST00000583344 GZMKP49863 264 aa5.9□□□□□ -1.46
SMCHD1-208ENST00000583344 WNT3AP56704 352 aa5.9□□□□□ -1.46
SMCHD1-208ENST00000583344 PHC1P78364 1004 aa5.9□□□□□ -1.46
SMCHD1-208ENST00000583344 TERF2Q15554 542 aa5.9□□□□□ -1.46
SMCHD1-208ENST00000583344 GPR158Q5T848 1215 aa5.9□□□□□ -1.46
SMCHD1-208ENST00000583344 NDC1Q9BTX1 674 aa5.9□□□□□ -1.46
SMCHD1-208ENST00000583344 ANO3Q9BYT9 981 aa5.9□□□□□ -1.46
SMCHD1-208ENST00000583344 PRDM12Q9H4Q4 367 aa5.9□□□□□ -1.46
SMCHD1-208ENST00000583344 TMPRSS11EQ9UL52 423 aa5.9□□□□□ -1.46
SMCHD1-208ENST00000583344 HDAC5Q9UQL6 1122 aa5.9□□□□□ -1.46
SMCHD1-208ENST00000583344 CENPVL1A0A0U1RR11 272 aa5.89□□□□□ -1.47
SMCHD1-208ENST00000583344 LEFTY2O00292 366 aa5.89□□□□□ -1.47
SMCHD1-208ENST00000583344 NRP2O60462 931 aa5.89□□□□□ -1.47
SMCHD1-208ENST00000583344 LAG3P18627 525 aa5.89□□□□□ -1.47
SMCHD1-208ENST00000583344 XPAP23025 273 aaPredicted RBP5.89□□□□□ -1.47
SMCHD1-208ENST00000583344 LSP1P33241 339 aa5.89□□□□□ -1.47
SMCHD1-208ENST00000583344 ADRA1BP35368 520 aa5.89□□□□□ -1.47
SMCHD1-208ENST00000583344 IL2P60568 153 aa5.89□□□□□ -1.47
SMCHD1-208ENST00000583344 UBE3CQ15386 1083 aa5.89□□□□□ -1.47
SMCHD1-208ENST00000583344 METTL24Q5JXM2 366 aa5.89□□□□□ -1.47
SMCHD1-208ENST00000583344 DOK3Q7L591 496 aa5.89□□□□□ -1.47
SMCHD1-208ENST00000583344 LYSMD2Q8IV50 215 aa5.89□□□□□ -1.47
SMCHD1-208ENST00000583344 LILRA3Q8N6C8 439 aaPredicted RBP5.89□□□□□ -1.47
SMCHD1-208ENST00000583344 BEND2Q8NDZ0 799 aa5.89□□□□□ -1.47
SMCHD1-208ENST00000583344 UBXN4Q92575 508 aa5.89□□□□□ -1.47
SMCHD1-208ENST00000583344 APPBP2Q92624 585 aa5.89□□□□□ -1.47
SMCHD1-208ENST00000583344 TRPM5Q9NZQ8 1165 aa5.89□□□□□ -1.47
SMCHD1-208ENST00000583344 EVLQ9UI08 416 aaPredicted RBP5.89□□□□□ -1.47
SMCHD1-208ENST00000583344 CCDC180Q9P1Z9 1646 aa5.88□□□□□ -1.47
SMCHD1-208ENST00000583344 KDM1AO60341 852 aa5.88□□□□□ -1.47
SMCHD1-208ENST00000583344 PRAMEF4O60810 478 aa5.88□□□□□ -1.47
SMCHD1-208ENST00000583344 NUDT3O95989 172 aa5.88□□□□□ -1.47
SMCHD1-208ENST00000583344 LSSP48449 732 aa5.88□□□□□ -1.47
SMCHD1-208ENST00000583344 GPR15P49685 360 aa5.88□□□□□ -1.47
SMCHD1-208ENST00000583344 SCNN1BP51168 640 aa5.88□□□□□ -1.47
SMCHD1-208ENST00000583344 MANFP55145 182 aaKnown RBP5.88□□□□□ -1.47
SMCHD1-208ENST00000583344 NRG3P56975 720 aa5.88□□□□□ -1.47
SMCHD1-208ENST00000583344 TRIM25Q14258 630 aaKnown RBP5.88□□□□□ -1.47
SMCHD1-208ENST00000583344 SART3Q15020 963 aaKnown RBP5.88□□□□□ -1.47
SMCHD1-208ENST00000583344 CSRP2Q16527 193 aa5.88□□□□□ -1.47
SMCHD1-208ENST00000583344 HECTD2Q5U5R9 776 aa5.88□□□□□ -1.47
SMCHD1-208ENST00000583344 DPY19L2P1Q6NXN4 242 aa5.88□□□□□ -1.47
SMCHD1-208ENST00000583344 CCDC62Q6P9F0 684 aa5.88□□□□□ -1.47
SMCHD1-208ENST00000583344 GLB1L2Q8IW92 636 aa5.88□□□□□ -1.47
SMCHD1-208ENST00000583344 DRC1Q96MC2 740 aa5.88□□□□□ -1.47
SMCHD1-208ENST00000583344 SLC46A2Q9BY10 475 aa5.88□□□□□ -1.47
SMCHD1-208ENST00000583344 ANKFY1Q9P2R3 1169 aa5.88□□□□□ -1.47
SMCHD1-208ENST00000583344 PACSIN3Q9UKS6 424 aa5.88□□□□□ -1.47
SMCHD1-208ENST00000583344 B3GALT2O43825 422 aa5.87□□□□□ -1.47
SMCHD1-208ENST00000583344 TMEM127O75204 238 aa5.87□□□□□ -1.47
SMCHD1-208ENST00000583344 NCR1O76036 304 aa5.87□□□□□ -1.47
SMCHD1-208ENST00000583344 FKBP9O95302 570 aa5.87□□□□□ -1.47
SMCHD1-208ENST00000583344 LMNAP02545 664 aaKnown RBP5.87□□□□□ -1.47
SMCHD1-208ENST00000583344 OCRLQ01968 901 aa5.87□□□□□ -1.47
SMCHD1-208ENST00000583344 CCDC178Q5BJE1 867 aa5.87□□□□□ -1.47
SMCHD1-208ENST00000583344 ANKS6Q68DC2 871 aa5.87□□□□□ -1.47
SMCHD1-208ENST00000583344 FKBP9P1Q75LS8 142 aa5.87□□□□□ -1.47
SMCHD1-208ENST00000583344 GPRIN1Q7Z2K8 1008 aa5.87□□□□□ -1.47
SMCHD1-208ENST00000583344 GDF7Q7Z4P5 450 aa5.87□□□□□ -1.47
SMCHD1-208ENST00000583344 SYT12Q8IV01 421 aa5.87□□□□□ -1.47
SMCHD1-208ENST00000583344 SLC41A1Q8IVJ1 513 aa5.87□□□□□ -1.47
SMCHD1-208ENST00000583344 PPM1KQ8N3J5 372 aa5.87□□□□□ -1.47
SMCHD1-208ENST00000583344 MYEOVQ96EZ4 313 aa5.87□□□□□ -1.47
SMCHD1-208ENST00000583344 TEX101Q9BY14 249 aa5.87□□□□□ -1.47
SMCHD1-208ENST00000583344 SPON1Q9HCB6 807 aa5.87□□□□□ -1.47
SMCHD1-208ENST00000583344 PRSS50Q9UI38 385 aa5.87□□□□□ -1.47
SMCHD1-208ENST00000583344 CHST2Q9Y4C5 530 aa5.87□□□□□ -1.47
SMCHD1-208ENST00000583344 NUMBLQ9Y6R0 609 aa5.87□□□□□ -1.47
SMCHD1-208ENST00000583344 ZMYM3Q14202 1370 aa5.87□□□□□ -1.47
SMCHD1-208ENST00000583344 SHROOM4Q9ULL8 1493 aa5.87□□□□□ -1.47
SMCHD1-208ENST00000583344 PRR5-ARHGAP8B1AHC4 643 aa5.86□□□□□ -1.47
SMCHD1-208ENST00000583344 PPFIA4O75335 1185 aa5.86□□□□□ -1.47
SMCHD1-208ENST00000583344 RHOBTB3O94955 611 aa5.86□□□□□ -1.47
SMCHD1-208ENST00000583344 LTA4HP09960 611 aaKnown RBP5.86□□□□□ -1.47
SMCHD1-208ENST00000583344 HSP90B1P14625 803 aaKnown RBP5.86□□□□□ -1.47
SMCHD1-208ENST00000583344 RNASE9P60153 205 aaKnown RBP5.86□□□□□ -1.47
SMCHD1-208ENST00000583344 APBA1Q02410 837 aa5.86□□□□□ -1.47
SMCHD1-208ENST00000583344 BROXQ5VW32 411 aa5.86□□□□□ -1.47
SMCHD1-208ENST00000583344 BTNL9Q6UXG8 535 aa5.86□□□□□ -1.47
SMCHD1-208ENST00000583344 ABHD15Q6UXT9 468 aa5.86□□□□□ -1.47
SMCHD1-208ENST00000583344 FRMD7Q6ZUT3 714 aa5.86□□□□□ -1.47
SMCHD1-208ENST00000583344 OR2W6PQ8NHA6 318 aa5.86□□□□□ -1.47
SMCHD1-208ENST00000583344 EMC7Q9NPA0 242 aa5.86□□□□□ -1.47
SMCHD1-208ENST00000583344 AKIP1Q9NQ31 210 aa5.86□□□□□ -1.47
SMCHD1-208ENST00000583344 CDC45O75419 566 aa5.85□□□□□ -1.47
SMCHD1-208ENST00000583344 LPLP06858 475 aa5.85□□□□□ -1.47
SMCHD1-208ENST00000583344 NHLH2Q02577 135 aa5.85□□□□□ -1.47
SMCHD1-208ENST00000583344 DDB1Q16531 1140 aa5.85□□□□□ -1.47
SMCHD1-208ENST00000583344 DALRD3Q5D0E6 543 aaKnown RBP5.85□□□□□ -1.47
SMCHD1-208ENST00000583344 PITRM1Q5JRX3 1037 aa5.85□□□□□ -1.47
SMCHD1-208ENST00000583344 IQSEC1Q6DN90 963 aa5.85□□□□□ -1.47
SMCHD1-208ENST00000583344 Q6YL49 198 aa5.85□□□□□ -1.47
SMCHD1-208ENST00000583344 C11orf74Q86VG3 221 aa5.85□□□□□ -1.47
SMCHD1-208ENST00000583344 RNF169Q8NCN4 708 aa5.85□□□□□ -1.47
SMCHD1-208ENST00000583344 OR10H5Q8NGA6 315 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms