RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 RNF39Q9H2S5 420 aa18.06■□□□□ 0.48
RNF43-206ENST00000582293 ST6GALNAC4Q9H4F1 302 aa18.06■□□□□ 0.48
RNF43-206ENST00000582293 HCSTQ9UBK5 93 aa18.06■□□□□ 0.48
RNF43-206ENST00000582293 HES2Q9Y543 173 aa18.06■□□□□ 0.48
RNF43-206ENST00000582293 PCDHB7Q9Y5E2 793 aa18.06■□□□□ 0.48
RNF43-206ENST00000582293 KIAA1671Q9BY89 1806 aa18.06■□□□□ 0.48
RNF43-206ENST00000582293 TMEM265A0A087WTH1 108 aa18.05■□□□□ 0.48
RNF43-206ENST00000582293 K7ENM7 598 aa18.05■□□□□ 0.48
RNF43-206ENST00000582293 KLRC4O43908 158 aa18.05■□□□□ 0.48
RNF43-206ENST00000582293 EOMESO95936 686 aa18.05■□□□□ 0.48
RNF43-206ENST00000582293 IDEP14735 1019 aa18.05■□□□□ 0.48
RNF43-206ENST00000582293 PROZP22891 400 aa18.05■□□□□ 0.48
RNF43-206ENST00000582293 AFF1P51825 1210 aaKnown RBP18.05■□□□□ 0.48
RNF43-206ENST00000582293 CASP5P51878 434 aa18.05■□□□□ 0.48
RNF43-206ENST00000582293 SMTNP53814 917 aa18.05■□□□□ 0.48
RNF43-206ENST00000582293 GTF2BQ00403 316 aa18.05■□□□□ 0.48
RNF43-206ENST00000582293 ZC2HC1CQ53FD0 456 aaPredicted RBP18.05■□□□□ 0.48
RNF43-206ENST00000582293 CLEC17AQ6ZS10 378 aa18.05■□□□□ 0.48
RNF43-206ENST00000582293 ZNF720Q7Z2F6 126 aa18.05■□□□□ 0.48
RNF43-206ENST00000582293 FAM178BQ8IXR5 827 aa18.05■□□□□ 0.48
RNF43-206ENST00000582293 GLIS3Q8NEA6 775 aa18.05■□□□□ 0.48
RNF43-206ENST00000582293 IKZF4Q9H2S9 585 aa18.05■□□□□ 0.48
RNF43-206ENST00000582293 SEMA6BQ9H3T3 888 aa18.05■□□□□ 0.48
RNF43-206ENST00000582293 NXF3Q9H4D5 531 aaKnown RBP18.05■□□□□ 0.48
RNF43-206ENST00000582293 ZNF576Q9H609 170 aa18.05■□□□□ 0.48
RNF43-206ENST00000582293 PANK4Q9NVE7 773 aa18.05■□□□□ 0.48
RNF43-206ENST00000582293 LRFN2Q9ULH4 789 aa18.05■□□□□ 0.48
RNF43-206ENST00000582293 IPPQ9Y573 584 aa18.05■□□□□ 0.48
RNF43-206ENST00000582293 EPOPA6NHQ4 379 aa18.04■□□□□ 0.48
RNF43-206ENST00000582293 ZNF202O95125 648 aa18.04■□□□□ 0.48
RNF43-206ENST00000582293 NPTXRO95502 500 aa18.04■□□□□ 0.48
RNF43-206ENST00000582293 PRR29P0C7W0 189 aa18.04■□□□□ 0.48
RNF43-206ENST00000582293 GAP43P17677 238 aa18.04■□□□□ 0.48
RNF43-206ENST00000582293 RAB27AP51159 221 aa18.04■□□□□ 0.48
RNF43-206ENST00000582293 COASYQ13057 564 aa18.04■□□□□ 0.48
RNF43-206ENST00000582293 PAN2Q504Q3 1202 aaKnown RBP18.04■□□□□ 0.48
RNF43-206ENST00000582293 ATF7IP2Q5U623 682 aa18.04■□□□□ 0.48
RNF43-206ENST00000582293 PPP2R2DQ66LE6 453 aa18.04■□□□□ 0.48
RNF43-206ENST00000582293 KRBA2Q6ZNG9 492 aa18.04■□□□□ 0.48
RNF43-206ENST00000582293 LRRC55Q6ZSA7 311 aa18.04■□□□□ 0.48
RNF43-206ENST00000582293 CMTR2Q8IYT2 770 aaKnown RBP18.04■□□□□ 0.48
RNF43-206ENST00000582293 CEP57L1Q8IYX8 460 aa18.04■□□□□ 0.48
RNF43-206ENST00000582293 RNF169Q8NCN4 708 aa18.04■□□□□ 0.48
RNF43-206ENST00000582293 ZBTB45Q96K62 511 aaPredicted RBP18.04■□□□□ 0.48
RNF43-206ENST00000582293 HAPLN2Q9GZV7 340 aa18.04■□□□□ 0.48
RNF43-206ENST00000582293 SLC28A3Q9HAS3 691 aa18.04■□□□□ 0.48
RNF43-206ENST00000582293 OLFML3Q9NRN5 406 aa18.04■□□□□ 0.48
RNF43-206ENST00000582293 TBC1D7Q9P0N9 293 aa18.04■□□□□ 0.48
RNF43-206ENST00000582293 USP25Q9UHP3 1055 aa18.04■□□□□ 0.48
RNF43-206ENST00000582293 KCNG1Q9UIX4 513 aa18.04■□□□□ 0.48
RNF43-206ENST00000582293 TBX20Q9UMR3 447 aa18.04■□□□□ 0.48
RNF43-206ENST00000582293 TNFSF13BQ9Y275 285 aa18.04■□□□□ 0.48
RNF43-206ENST00000582293 MRPL42Q9Y6G3 142 aaKnown RBP18.04■□□□□ 0.48
RNF43-206ENST00000582293 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.03■□□□□ 0.48
RNF43-206ENST00000582293 N4BP3O15049 544 aa18.03■□□□□ 0.48
RNF43-206ENST00000582293 OFD1O75665 1012 aa18.03■□□□□ 0.48
RNF43-206ENST00000582293 MYBP10242 640 aa18.03■□□□□ 0.48
RNF43-206ENST00000582293 SKIP12755 728 aa18.03■□□□□ 0.48
RNF43-206ENST00000582293 ASIC1P78348 528 aa18.03■□□□□ 0.48
RNF43-206ENST00000582293 AMPD3Q01432 767 aa18.03■□□□□ 0.48
RNF43-206ENST00000582293 NCBP1Q09161 790 aaKnown RBP18.03■□□□□ 0.48
RNF43-206ENST00000582293 KCNA1Q09470 495 aa18.03■□□□□ 0.48
RNF43-206ENST00000582293 GRIN2CQ14957 1233 aa18.03■□□□□ 0.48
RNF43-206ENST00000582293 HERC4Q5GLZ8 1057 aaPredicted RBP18.03■□□□□ 0.48
RNF43-206ENST00000582293 SLC39A4Q6P5W5 647 aa18.03■□□□□ 0.48
RNF43-206ENST00000582293 HELQQ8TDG4 1101 aa18.03■□□□□ 0.48
RNF43-206ENST00000582293 FAM161BQ96MY7 647 aa18.03■□□□□ 0.48
RNF43-206ENST00000582293 C17orf80Q9BSJ5 609 aa18.03■□□□□ 0.48
RNF43-206ENST00000582293 MRPL4Q9BYD3 311 aaKnown RBP18.03■□□□□ 0.48
RNF43-206ENST00000582293 LRRC27Q9C0I9 530 aa18.03■□□□□ 0.48
RNF43-206ENST00000582293 CXCL16Q9H2A7 254 aa18.03■□□□□ 0.48
RNF43-206ENST00000582293 CERS4Q9HA82 394 aa18.03■□□□□ 0.48
RNF43-206ENST00000582293 SEL1LQ9UBV2 794 aa18.03■□□□□ 0.48
RNF43-206ENST00000582293 TBKBP1A7MCY6 615 aa18.02■□□□□ 0.48
RNF43-206ENST00000582293 PIGRP01833 764 aa18.02■□□□□ 0.48
RNF43-206ENST00000582293 ERVK-21P61565 698 aa18.02■□□□□ 0.48
RNF43-206ENST00000582293 BTG3Q14201 252 aaPredicted RBP18.02■□□□□ 0.48
RNF43-206ENST00000582293 ZNF697Q5TEC3 545 aa18.02■□□□□ 0.48
RNF43-206ENST00000582293 UNC13DQ70J99 1090 aa18.02■□□□□ 0.48
RNF43-206ENST00000582293 NLRC5Q86WI3 1866 aa18.02■□□□□ 0.48
RNF43-206ENST00000582293 MAP4K3Q8IVH8 894 aa18.02■□□□□ 0.48
RNF43-206ENST00000582293 CCDC65Q8IXS2 484 aa18.02■□□□□ 0.48
RNF43-206ENST00000582293 CEP120Q8N960 986 aa18.02■□□□□ 0.48
RNF43-206ENST00000582293 CLP1Q92989 425 aaKnown RBP18.02■□□□□ 0.48
RNF43-206ENST00000582293 TMEM117Q9H0C3 514 aa18.02■□□□□ 0.48
RNF43-206ENST00000582293 CDT1Q9H211 546 aa18.02■□□□□ 0.48
RNF43-206ENST00000582293 CWH43Q9H720 699 aa18.02■□□□□ 0.48
RNF43-206ENST00000582293 COL4A4P53420 1690 aaPredicted RBP18.02■□□□□ 0.47
RNF43-206ENST00000582293 RALGAPA2Q2PPJ7 1873 aa18.01■□□□□ 0.47
RNF43-206ENST00000582293 TISP43B9A030 160 aa18.01■□□□□ 0.47
RNF43-206ENST00000582293 H0YCG3 227 aa18.01■□□□□ 0.47
RNF43-206ENST00000582293 INPPL1O15357 1258 aa18.01■□□□□ 0.47
RNF43-206ENST00000582293 MEFVO15553 781 aaPredicted RBP18.01■□□□□ 0.47
RNF43-206ENST00000582293 GTPBP6O43824 516 aaPredicted RBP18.01■□□□□ 0.47
RNF43-206ENST00000582293 B4GALT3O60512 393 aa18.01■□□□□ 0.47
RNF43-206ENST00000582293 NR1I2O75469 434 aa18.01■□□□□ 0.47
RNF43-206ENST00000582293 AKAP5P24588 427 aa18.01■□□□□ 0.47
RNF43-206ENST00000582293 FAM160A1Q05DH4 1040 aa18.01■□□□□ 0.47
RNF43-206ENST00000582293 ZPBP2Q6X784 338 aa18.01■□□□□ 0.47
RNF43-206ENST00000582293 TMEM192Q8IY95 271 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms