RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 AK8Q96MA6 479 aa21.54■■□□□ 1.04
SREBF1-220ENST00000581707 PNMA5Q96PV4 448 aa21.54■■□□□ 1.04
SREBF1-220ENST00000581707 FAM193BQ96PV7 902 aaPredicted RBP21.54■■□□□ 1.04
SREBF1-220ENST00000581707 NT5C3AQ9H0P0 336 aa21.54■■□□□ 1.04
SREBF1-220ENST00000581707 FOXD4L1Q9NU39 408 aa21.54■■□□□ 1.04
SREBF1-220ENST00000581707 DNAJB4Q9UDY4 337 aa21.54■■□□□ 1.04
SREBF1-220ENST00000581707 POMCP01189 267 aa21.53■■□□□ 1.04
SREBF1-220ENST00000581707 PRKCBP05771 671 aa21.53■■□□□ 1.04
SREBF1-220ENST00000581707 LIG1P18858 919 aa21.53■■□□□ 1.04
SREBF1-220ENST00000581707 NDUFV1P49821 464 aa21.53■■□□□ 1.04
SREBF1-220ENST00000581707 EFNA5P52803 228 aa21.53■■□□□ 1.04
SREBF1-220ENST00000581707 PRPF4BQ13523 1007 aaKnown RBP21.53■■□□□ 1.04
SREBF1-220ENST00000581707 SF3A1Q15459 793 aaKnown RBP21.53■■□□□ 1.04
SREBF1-220ENST00000581707 RINT1Q6NUQ1 792 aa21.53■■□□□ 1.04
SREBF1-220ENST00000581707 IGSF21Q96ID5 467 aa21.53■■□□□ 1.04
SREBF1-220ENST00000581707 CDK5RAP3Q96JB5 506 aa21.53■■□□□ 1.04
SREBF1-220ENST00000581707 GAD1Q99259 594 aa21.53■■□□□ 1.04
SREBF1-220ENST00000581707 PLIN2Q99541 437 aa21.53■■□□□ 1.04
SREBF1-220ENST00000581707 CDCA3Q99618 268 aaPredicted RBP21.53■■□□□ 1.04
SREBF1-220ENST00000581707 RUSC1Q9BVN2 902 aa21.53■■□□□ 1.04
SREBF1-220ENST00000581707 APOL6Q9BWW8 343 aa21.53■■□□□ 1.04
SREBF1-220ENST00000581707 CCDC113Q9H0I3 377 aa21.53■■□□□ 1.04
SREBF1-220ENST00000581707 NXF3Q9H4D5 531 aaKnown RBP21.53■■□□□ 1.04
SREBF1-220ENST00000581707 GIT1Q9Y2X7 761 aa21.53■■□□□ 1.04
SREBF1-220ENST00000581707 ARL5CA6NH57 179 aa21.52■■□□□ 1.04
SREBF1-220ENST00000581707 TTLL13PA6NNM8 815 aa21.52■■□□□ 1.04
SREBF1-220ENST00000581707 ACKR2O00590 384 aa21.52■■□□□ 1.04
SREBF1-220ENST00000581707 B4GALT3O60512 393 aa21.52■■□□□ 1.04
SREBF1-220ENST00000581707 HIP1RO75146 1068 aa21.52■■□□□ 1.04
SREBF1-220ENST00000581707 TBX10O75333 385 aa21.52■■□□□ 1.04
SREBF1-220ENST00000581707 DDHD2O94830 711 aa21.52■■□□□ 1.04
SREBF1-220ENST00000581707 ALDH2P05091 517 aa21.52■■□□□ 1.04
SREBF1-220ENST00000581707 SLC11A1P49279 550 aa21.52■■□□□ 1.04
SREBF1-220ENST00000581707 CLUL1Q15846 466 aa21.52■■□□□ 1.04
SREBF1-220ENST00000581707 TMEM132AQ24JP5 1023 aa21.52■■□□□ 1.04
SREBF1-220ENST00000581707 C1orf186Q6ZWK4 172 aa21.52■■□□□ 1.04
SREBF1-220ENST00000581707 CABP7Q86V35 215 aa21.52■■□□□ 1.04
SREBF1-220ENST00000581707 TMEM173Q86WV6 379 aaPredicted RBP21.52■■□□□ 1.04
SREBF1-220ENST00000581707 DRC1Q96MC2 740 aa21.52■■□□□ 1.04
SREBF1-220ENST00000581707 KIFC3Q9BVG8 833 aa21.52■■□□□ 1.04
SREBF1-220ENST00000581707 FAM50BQ9Y247 325 aa21.52■■□□□ 1.04
SREBF1-220ENST00000581707 FSD2A1L4K1 749 aa21.51■■□□□ 1.03
SREBF1-220ENST00000581707 HIDE1A8MVS5 230 aa21.51■■□□□ 1.03
SREBF1-220ENST00000581707 N4BP3O15049 544 aa21.51■■□□□ 1.03
SREBF1-220ENST00000581707 INPPL1O15357 1258 aa21.51■■□□□ 1.03
SREBF1-220ENST00000581707 SSBP05455 408 aaKnown RBP eCLIP21.51■■□□□ 1.03
SREBF1-220ENST00000581707 IL9P15248 144 aa21.51■■□□□ 1.03
SREBF1-220ENST00000581707 MLH1P40692 756 aa21.51■■□□□ 1.03
SREBF1-220ENST00000581707 PEX3P56589 373 aa21.51■■□□□ 1.03
SREBF1-220ENST00000581707 RESTQ13127 1097 aa21.51■■□□□ 1.03
SREBF1-220ENST00000581707 BMS1Q14692 1282 aaKnown RBP21.51■■□□□ 1.03
SREBF1-220ENST00000581707 DUSP6Q16828 381 aa21.51■■□□□ 1.03
SREBF1-220ENST00000581707 DDX53Q86TM3 631 aaKnown RBP21.51■■□□□ 1.03
SREBF1-220ENST00000581707 DAW1Q8N136 415 aa21.51■■□□□ 1.03
SREBF1-220ENST00000581707 SNX21Q969T3 373 aa21.51■■□□□ 1.03
SREBF1-220ENST00000581707 ZFP42Q96MM3 310 aa21.51■■□□□ 1.03
SREBF1-220ENST00000581707 TMEM175Q9BSA9 504 aa21.51■■□□□ 1.03
SREBF1-220ENST00000581707 PDZD7Q9H5P4 517 aa21.51■■□□□ 1.03
SREBF1-220ENST00000581707 USP20Q9Y2K6 914 aa21.51■■□□□ 1.03
SREBF1-220ENST00000581707 CCDC169A6NNP5 214 aa21.5■■□□□ 1.03
SREBF1-220ENST00000581707 K7ERI5 159 aa21.5■■□□□ 1.03
SREBF1-220ENST00000581707 SLC26A4O43511 780 aa21.5■■□□□ 1.03
SREBF1-220ENST00000581707 GLP2RO95838 553 aa21.5■■□□□ 1.03
SREBF1-220ENST00000581707 AKAP5P24588 427 aa21.5■■□□□ 1.03
SREBF1-220ENST00000581707 LONP1P36776 959 aaKnown RBP21.5■■□□□ 1.03
SREBF1-220ENST00000581707 UBA7P41226 1012 aa21.5■■□□□ 1.03
SREBF1-220ENST00000581707 NPTX2P47972 431 aa21.5■■□□□ 1.03
SREBF1-220ENST00000581707 SMC1AQ14683 1233 aaKnown RBP21.5■■□□□ 1.03
SREBF1-220ENST00000581707 TMEM119Q4V9L6 283 aa21.5■■□□□ 1.03
SREBF1-220ENST00000581707 VPS52Q8N1B4 723 aa21.5■■□□□ 1.03
SREBF1-220ENST00000581707 MRPL43Q8N983 215 aaKnown RBP21.5■■□□□ 1.03
SREBF1-220ENST00000581707 SYT2Q8N9I0 419 aaPredicted RBP21.5■■□□□ 1.03
SREBF1-220ENST00000581707 BCL7CQ8WUZ0 217 aaPredicted RBP21.5■■□□□ 1.03
SREBF1-220ENST00000581707 TIPINQ9BVW5 301 aa21.5■■□□□ 1.03
SREBF1-220ENST00000581707 MIOSQ9NXC5 875 aa21.5■■□□□ 1.03
SREBF1-220ENST00000581707 CLEC1BQ9P126 229 aa21.5■■□□□ 1.03
SREBF1-220ENST00000581707 CD207Q9UJ71 328 aa21.5■■□□□ 1.03
SREBF1-220ENST00000581707 FAN1Q9Y2M0 1017 aa21.5■■□□□ 1.03
SREBF1-220ENST00000581707 TDRD15B5MCY1 1934 aaKnown RBP21.5■■□□□ 1.03
SREBF1-220ENST00000581707 CXCL14O95715 111 aa21.49■■□□□ 1.03
SREBF1-220ENST00000581707 EDN1P05305 212 aa21.49■■□□□ 1.03
SREBF1-220ENST00000581707 PLA2G4BP0C869 781 aa21.49■■□□□ 1.03
SREBF1-220ENST00000581707 GUCY2CP25092 1073 aa21.49■■□□□ 1.03
SREBF1-220ENST00000581707 SCNN1GP51170 649 aa21.49■■□□□ 1.03
SREBF1-220ENST00000581707 GRIN1Q05586 938 aa21.49■■□□□ 1.03
SREBF1-220ENST00000581707 MAPK7Q13164 816 aa21.49■■□□□ 1.03
SREBF1-220ENST00000581707 DMP1Q13316 513 aaPredicted RBP21.49■■□□□ 1.03
SREBF1-220ENST00000581707 FAM178BQ8IXR5 827 aa21.49■■□□□ 1.03
SREBF1-220ENST00000581707 CALML4Q96GE6 196 aa21.49■■□□□ 1.03
SREBF1-220ENST00000581707 MSLNLQ96KJ4 702 aa21.49■■□□□ 1.03
SREBF1-220ENST00000581707 ADPGKQ9BRR6 497 aa21.49■■□□□ 1.03
SREBF1-220ENST00000581707 C17orf75Q9HAS0 396 aa21.49■■□□□ 1.03
SREBF1-220ENST00000581707 KLK14Q9P0G3 267 aa21.49■■□□□ 1.03
SREBF1-220ENST00000581707 PARP2Q9UGN5 583 aa21.49■■□□□ 1.03
SREBF1-220ENST00000581707 MTMR6Q9Y217 621 aa21.49■■□□□ 1.03
SREBF1-220ENST00000581707 CLIC4Q9Y696 253 aa21.49■■□□□ 1.03
SREBF1-220ENST00000581707 C2orf71A6NGG8 1288 aa21.48■■□□□ 1.03
SREBF1-220ENST00000581707 NRP1O14786 923 aa21.48■■□□□ 1.03
SREBF1-220ENST00000581707 SLC12A3P55017 1021 aa21.48■■□□□ 1.03
SREBF1-220ENST00000581707 FAM173BQ6P4H8 233 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms