RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 GPBP1Q86WP2 473 aa26.38■■□□□ 1.81
LIMD2-207ENST00000579329 THNSL1Q8IYQ7 743 aa26.38■■□□□ 1.81
LIMD2-207ENST00000579329 URGCPQ8TCY9 931 aa26.38■■□□□ 1.81
LIMD2-207ENST00000579329 LARP4BQ92615 738 aaKnown RBP26.38■■□□□ 1.81
LIMD2-207ENST00000579329 ZNF558Q96NG5 402 aa26.38■■□□□ 1.81
LIMD2-207ENST00000579329 NECAB3Q96P71 396 aaPredicted RBP26.38■■□□□ 1.81
LIMD2-207ENST00000579329 ALG13Q9NP73 1137 aaKnown RBP26.38■■□□□ 1.81
LIMD2-207ENST00000579329 KMT5AQ9NQR1 393 aa26.38■■□□□ 1.81
LIMD2-207ENST00000579329 KCNG1Q9UIX4 513 aa26.38■■□□□ 1.81
LIMD2-207ENST00000579329 INPP5FQ9Y2H2 1132 aa26.38■■□□□ 1.81
LIMD2-207ENST00000579329 NPTXRO95502 500 aa26.37■■□□□ 1.81
LIMD2-207ENST00000579329 DHX8Q14562 1220 aaKnown RBP26.37■■□□□ 1.81
LIMD2-207ENST00000579329 MCM6Q14566 821 aa26.37■■□□□ 1.81
LIMD2-207ENST00000579329 ATL3Q6DD88 541 aa26.37■■□□□ 1.81
LIMD2-207ENST00000579329 CDR2LQ86X02 465 aaPredicted RBP26.37■■□□□ 1.81
LIMD2-207ENST00000579329 STK17AQ9UEE5 414 aa26.37■■□□□ 1.81
LIMD2-207ENST00000579329 ODF2LQ9ULJ1 636 aa26.37■■□□□ 1.81
LIMD2-207ENST00000579329 RBM19Q9Y4C8 960 aaKnown RBP26.37■■□□□ 1.81
LIMD2-207ENST00000579329 SFI1A8K8P3 1242 aa26.36■■□□□ 1.81
LIMD2-207ENST00000579329 K7ERI5 159 aa26.36■■□□□ 1.81
LIMD2-207ENST00000579329 PLS3P13797 630 aa26.36■■□□□ 1.81
LIMD2-207ENST00000579329 FOXD4L6Q3SYB3 417 aaPredicted RBP26.36■■□□□ 1.81
LIMD2-207ENST00000579329 ARSHQ5FYA8 562 aa26.36■■□□□ 1.81
LIMD2-207ENST00000579329 KCNT2Q6UVM3 1135 aa26.36■■□□□ 1.81
LIMD2-207ENST00000579329 FOXD4L3Q6VB84 417 aaPredicted RBP26.36■■□□□ 1.81
LIMD2-207ENST00000579329 SPPL3Q8TCT6 385 aa26.36■■□□□ 1.81
LIMD2-207ENST00000579329 SPIRE2Q8WWL2 714 aa26.36■■□□□ 1.81
LIMD2-207ENST00000579329 PDZD7Q9H5P4 517 aa26.36■■□□□ 1.81
LIMD2-207ENST00000579329 TMEM134Q9H6X4 195 aa26.36■■□□□ 1.81
LIMD2-207ENST00000579329 TBC1D13Q9NVG8 400 aa26.36■■□□□ 1.81
LIMD2-207ENST00000579329 ARHGAP28Q9P2N2 729 aa26.36■■□□□ 1.81
LIMD2-207ENST00000579329 DAXXQ9UER7 740 aaPredicted RBP26.36■■□□□ 1.81
LIMD2-207ENST00000579329 NPHP3-ACAD11A0A0J9YXS1 232 aa26.35■■□□□ 1.81
LIMD2-207ENST00000579329 TTLL13PA6NNM8 815 aa26.35■■□□□ 1.81
LIMD2-207ENST00000579329 FGF18O76093 207 aa26.35■■□□□ 1.81
LIMD2-207ENST00000579329 DDIT3P35638 169 aa26.35■■□□□ 1.81
LIMD2-207ENST00000579329 PPM1AP35813 382 aa26.35■■□□□ 1.81
LIMD2-207ENST00000579329 SMTNP53814 917 aa26.35■■□□□ 1.81
LIMD2-207ENST00000579329 TFF2Q03403 129 aa26.35■■□□□ 1.81
LIMD2-207ENST00000579329 UBE3AQ05086 875 aa26.35■■□□□ 1.81
LIMD2-207ENST00000579329 RRAGBQ5VZM2 374 aa26.35■■□□□ 1.81
LIMD2-207ENST00000579329 POF1BQ8WVV4 589 aa26.35■■□□□ 1.81
LIMD2-207ENST00000579329 REEP2Q9BRK0 252 aa26.35■■□□□ 1.81
LIMD2-207ENST00000579329 ADPGKQ9BRR6 497 aa26.35■■□□□ 1.81
LIMD2-207ENST00000579329 APOL6Q9BWW8 343 aa26.35■■□□□ 1.81
LIMD2-207ENST00000579329 NXF3Q9H4D5 531 aaKnown RBP26.35■■□□□ 1.81
LIMD2-207ENST00000579329 NSUN3Q9H649 340 aaKnown RBP26.35■■□□□ 1.81
LIMD2-207ENST00000579329 LARSQ9P2J5 1176 aaKnown RBP26.35■■□□□ 1.81
LIMD2-207ENST00000579329 KANSL3Q9P2N6 904 aa26.35■■□□□ 1.81
LIMD2-207ENST00000579329 HES2Q9Y543 173 aa26.35■■□□□ 1.81
LIMD2-207ENST00000579329 CARNS1A5YM72 827 aa26.34■■□□□ 1.81
LIMD2-207ENST00000579329 SLC16A4O15374 487 aa26.34■■□□□ 1.81
LIMD2-207ENST00000579329 EDN1P05305 212 aa26.34■■□□□ 1.81
LIMD2-207ENST00000579329 KRT18P05783 430 aaKnown RBP26.34■■□□□ 1.81
LIMD2-207ENST00000579329 CACNB1Q02641 598 aaPredicted RBP26.34■■□□□ 1.81
LIMD2-207ENST00000579329 RNASELQ05823 741 aaKnown RBP26.34■■□□□ 1.81
LIMD2-207ENST00000579329 NTPCRQ9BSD7 190 aaKnown RBP26.34■■□□□ 1.81
LIMD2-207ENST00000579329 GIT1Q9Y2X7 761 aa26.34■■□□□ 1.81
LIMD2-207ENST00000579329 BRD1O95696 1058 aa26.33■■□□□ 1.81
LIMD2-207ENST00000579329 BMP1P13497 986 aa26.33■■□□□ 1.81
LIMD2-207ENST00000579329 PLCB3Q01970 1234 aa26.33■■□□□ 1.81
LIMD2-207ENST00000579329 CCDC73Q6ZRK6 1079 aa26.33■■□□□ 1.81
LIMD2-207ENST00000579329 KCNG4Q8TDN1 519 aa26.33■■□□□ 1.81
LIMD2-207ENST00000579329 RNF39Q9H2S5 420 aa26.33■■□□□ 1.81
LIMD2-207ENST00000579329 SPG21Q9NZD8 308 aa26.33■■□□□ 1.81
LIMD2-207ENST00000579329 CFAP45Q9UL16 551 aa26.33■■□□□ 1.81
LIMD2-207ENST00000579329 USP20Q9Y2K6 914 aa26.33■■□□□ 1.81
LIMD2-207ENST00000579329 ZMYM2Q9UBW7 1377 aa26.33■■□□□ 1.8
LIMD2-207ENST00000579329 INPPL1O15357 1258 aa26.32■■□□□ 1.8
LIMD2-207ENST00000579329 CUTAO60888 179 aa26.32■■□□□ 1.8
LIMD2-207ENST00000579329 ZC3H11AO75152 810 aaKnown RBP eCLIP26.32■■□□□ 1.8
LIMD2-207ENST00000579329 FAM13AO94988 1023 aa26.32■■□□□ 1.8
LIMD2-207ENST00000579329 DNAJB1P25685 340 aa26.32■■□□□ 1.8
LIMD2-207ENST00000579329 PBX3P40426 434 aa26.32■■□□□ 1.8
LIMD2-207ENST00000579329 ALDH7A1P49419 539 aaKnown RBP26.32■■□□□ 1.8
LIMD2-207ENST00000579329 BCAR1P56945 870 aa26.32■■□□□ 1.8
LIMD2-207ENST00000579329 CAMK1Q14012 370 aa26.32■■□□□ 1.8
LIMD2-207ENST00000579329 DCAF4L1Q3SXM0 396 aa26.32■■□□□ 1.8
LIMD2-207ENST00000579329 NT5DC1Q5TFE4 455 aa26.32■■□□□ 1.8
LIMD2-207ENST00000579329 ATF7IP2Q5U623 682 aa26.32■■□□□ 1.8
LIMD2-207ENST00000579329 APBB1IPQ7Z5R6 666 aaPredicted RBP26.32■■□□□ 1.8
LIMD2-207ENST00000579329 MRPL4Q9BYD3 311 aaKnown RBP26.32■■□□□ 1.8
LIMD2-207ENST00000579329 NRDE2Q9H7Z3 1164 aa26.32■■□□□ 1.8
LIMD2-207ENST00000579329 LZTS1Q9Y250 596 aa26.32■■□□□ 1.8
LIMD2-207ENST00000579329 MYH11P35749 1972 aa26.32■■□□□ 1.8
LIMD2-207ENST00000579329 PLXNA4Q9HCM2 1894 aa26.32■■□□□ 1.8
LIMD2-207ENST00000579329 H0YCG3 227 aa26.31■■□□□ 1.8
LIMD2-207ENST00000579329 TBCAO75347 108 aaKnown RBP26.31■■□□□ 1.8
LIMD2-207ENST00000579329 CSPG5O95196 566 aa26.31■■□□□ 1.8
LIMD2-207ENST00000579329 MLH1P40692 756 aa26.31■■□□□ 1.8
LIMD2-207ENST00000579329 STAT6P42226 847 aa26.31■■□□□ 1.8
LIMD2-207ENST00000579329 KCNQ1P51787 676 aa26.31■■□□□ 1.8
LIMD2-207ENST00000579329 DNM1Q05193 864 aaKnown RBP26.31■■□□□ 1.8
LIMD2-207ENST00000579329 GIT2Q14161 759 aa26.31■■□□□ 1.8
LIMD2-207ENST00000579329 TCEAL5Q5H9L2 206 aa26.31■■□□□ 1.8
LIMD2-207ENST00000579329 EEF1DP3Q658K8 133 aa26.31■■□□□ 1.8
LIMD2-207ENST00000579329 TAS1R3Q7RTX0 852 aa26.31■■□□□ 1.8
LIMD2-207ENST00000579329 SLC39A11Q8N1S5 342 aa26.31■■□□□ 1.8
LIMD2-207ENST00000579329 MRPS27Q92552 414 aaKnown RBP26.31■■□□□ 1.8
LIMD2-207ENST00000579329 GAD1Q99259 594 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms