RNA–Protein interactions for RNA: ENST00000579243.1

USH1G-201, Transcript of USH1 protein network component sans, humanhuman

TSL 2

Gene USH1G, Length 1,673 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1G-201ENST00000579243 KCNK18Q7Z418 384 aa22.03■■□□□ 1.12
USH1G-201ENST00000579243 IFNLR1Q8IU57 520 aaPredicted RBP22.03■■□□□ 1.12
USH1G-201ENST00000579243 PNMA5Q96PV4 448 aa22.03■■□□□ 1.12
USH1G-201ENST00000579243 TRIM5Q9C035 493 aa22.03■■□□□ 1.12
USH1G-201ENST00000579243 A0A0U1RQF3 1178 aa22.02■■□□□ 1.12
USH1G-201ENST00000579243 RPN1P04843 607 aaKnown RBP22.02■■□□□ 1.12
USH1G-201ENST00000579243 BTG3Q14201 252 aaPredicted RBP22.02■■□□□ 1.12
USH1G-201ENST00000579243 PIN4Q9Y237 131 aaKnown RBP22.02■■□□□ 1.12
USH1G-201ENST00000579243 ESPNB1AK53 854 aa22.01■■□□□ 1.11
USH1G-201ENST00000579243 LINC00271P0C7V0 271 aa22.01■■□□□ 1.11
USH1G-201ENST00000579243 IGFBP4P22692 258 aa22.01■■□□□ 1.11
USH1G-201ENST00000579243 GATMP50440 423 aa22.01■■□□□ 1.11
USH1G-201ENST00000579243 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.01■■□□□ 1.11
USH1G-201ENST00000579243 ECHDC2Q86YB7 292 aa22.01■■□□□ 1.11
USH1G-201ENST00000579243 CMTR2Q8IYT2 770 aaKnown RBP22.01■■□□□ 1.11
USH1G-201ENST00000579243 KCTD17Q8N5Z5 321 aa22.01■■□□□ 1.11
USH1G-201ENST00000579243 SAMD11Q96NU1 681 aa22.01■■□□□ 1.11
USH1G-201ENST00000579243 TRAIPQ9BWF2 469 aa22.01■■□□□ 1.11
USH1G-201ENST00000579243 NFKBIZQ9BYH8 718 aa22.01■■□□□ 1.11
USH1G-201ENST00000579243 NT5C3AQ9H0P0 336 aa22.01■■□□□ 1.11
USH1G-201ENST00000579243 PRUNE2Q8WUY3 3088 aa22.01■■□□□ 1.11
USH1G-201ENST00000579243 LPXNO60711 386 aa22.01■■□□□ 1.11
USH1G-201ENST00000579243 PTMAP06454 111 aaKnown RBP22.01■■□□□ 1.11
USH1G-201ENST00000579243 HOXA11P31270 313 aaPredicted RBP22.01■■□□□ 1.11
USH1G-201ENST00000579243 EPC2Q52LR7 807 aa22.01■■□□□ 1.11
USH1G-201ENST00000579243 TMEM192Q8IY95 271 aa22.01■■□□□ 1.11
USH1G-201ENST00000579243 MAFAQ8NHW3 353 aaPredicted RBP22.01■■□□□ 1.11
USH1G-201ENST00000579243 CLP1Q92989 425 aaKnown RBP22.01■■□□□ 1.11
USH1G-201ENST00000579243 AGPAT5Q9NUQ2 364 aa22.01■■□□□ 1.11
USH1G-201ENST00000579243 POU3F3P20264 500 aaPredicted RBP22■■□□□ 1.11
USH1G-201ENST00000579243 CDC25BP30305 580 aa22■■□□□ 1.11
USH1G-201ENST00000579243 KCNB1Q14721 858 aa22■■□□□ 1.11
USH1G-201ENST00000579243 PCBP1Q15365 356 aaKnown RBP eCLIP22■■□□□ 1.11
USH1G-201ENST00000579243 FBXO22Q8NEZ5 403 aa22■■□□□ 1.11
USH1G-201ENST00000579243 BLOC1S4Q9NUP1 217 aa22■■□□□ 1.11
USH1G-201ENST00000579243 INO80B-WBP1J3KQ70 363 aa21.99■■□□□ 1.11
USH1G-201ENST00000579243 EOMESO95936 686 aa21.99■■□□□ 1.11
USH1G-201ENST00000579243 ERCC5P28715 1186 aaPredicted RBP21.99■■□□□ 1.11
USH1G-201ENST00000579243 CLCN1P35523 988 aa21.99■■□□□ 1.11
USH1G-201ENST00000579243 AMPD3Q01432 767 aa21.99■■□□□ 1.11
USH1G-201ENST00000579243 MBTD1Q05BQ5 628 aa21.99■■□□□ 1.11
USH1G-201ENST00000579243 PAN2Q504Q3 1202 aaKnown RBP21.99■■□□□ 1.11
USH1G-201ENST00000579243 TWF2Q6IBS0 349 aaKnown RBP21.99■■□□□ 1.11
USH1G-201ENST00000579243 ZNF598Q86UK7 904 aaKnown RBP21.99■■□□□ 1.11
USH1G-201ENST00000579243 LARP4BQ92615 738 aaKnown RBP21.99■■□□□ 1.11
USH1G-201ENST00000579243 C7orf25Q9BPX7 421 aa21.99■■□□□ 1.11
USH1G-201ENST00000579243 POLD4Q9HCU8 107 aa21.99■■□□□ 1.11
USH1G-201ENST00000579243 FGFR1P11362 822 aa21.98■■□□□ 1.11
USH1G-201ENST00000579243 BMPR1AP36894 532 aa21.98■■□□□ 1.11
USH1G-201ENST00000579243 RINT1Q6NUQ1 792 aa21.98■■□□□ 1.11
USH1G-201ENST00000579243 ENOX1Q8TC92 643 aaKnown RBP21.98■■□□□ 1.11
USH1G-201ENST00000579243 GDPD5Q8WTR4 605 aa21.98■■□□□ 1.11
USH1G-201ENST00000579243 BSNDQ8WZ55 320 aa21.98■■□□□ 1.11
USH1G-201ENST00000579243 RAD54LQ92698 747 aa21.98■■□□□ 1.11
USH1G-201ENST00000579243 MRFAP1L1Q96HT8 127 aa21.98■■□□□ 1.11
USH1G-201ENST00000579243 TRIM9Q9C026 710 aa21.98■■□□□ 1.11
USH1G-201ENST00000579243 RNF19AQ9NV58 838 aa21.98■■□□□ 1.11
USH1G-201ENST00000579243 MTCH2Q9Y6C9 303 aa21.98■■□□□ 1.11
USH1G-201ENST00000579243 MRPL42Q9Y6G3 142 aaKnown RBP21.98■■□□□ 1.11
USH1G-201ENST00000579243 LRRIQ4A6NIV6 560 aa21.98■■□□□ 1.11
USH1G-201ENST00000579243 TBKBP1A7MCY6 615 aa21.98■■□□□ 1.11
USH1G-201ENST00000579243 KLRC4O43908 158 aa21.98■■□□□ 1.11
USH1G-201ENST00000579243 ERLIN2O94905 339 aa21.98■■□□□ 1.11
USH1G-201ENST00000579243 ATF7P17544 494 aaPredicted RBP21.98■■□□□ 1.11
USH1G-201ENST00000579243 AMHR2Q16671 573 aa21.98■■□□□ 1.11
USH1G-201ENST00000579243 ZNF658Q5TYW1 1059 aaPredicted RBP21.98■■□□□ 1.11
USH1G-201ENST00000579243 C1orf186Q6ZWK4 172 aa21.98■■□□□ 1.11
USH1G-201ENST00000579243 SV2BQ7L1I2 683 aa21.98■■□□□ 1.11
USH1G-201ENST00000579243 RNF169Q8NCN4 708 aa21.98■■□□□ 1.11
USH1G-201ENST00000579243 KIFAP3Q92845 792 aa21.98■■□□□ 1.11
USH1G-201ENST00000579243 RUSC1Q9BVN2 902 aa21.98■■□□□ 1.11
USH1G-201ENST00000579243 HSD3B7Q9H2F3 369 aa21.98■■□□□ 1.11
USH1G-201ENST00000579243 RWDD3Q9Y3V2 267 aa21.98■■□□□ 1.11
USH1G-201ENST00000579243 C5orf67F2Z3F1 127 aa21.97■■□□□ 1.11
USH1G-201ENST00000579243 HOXA2O43364 376 aa21.97■■□□□ 1.11
USH1G-201ENST00000579243 TSPAN1O60635 241 aa21.97■■□□□ 1.11
USH1G-201ENST00000579243 SKIP12755 728 aa21.97■■□□□ 1.11
USH1G-201ENST00000579243 CDCA2Q69YH5 1023 aaPredicted RBP21.97■■□□□ 1.11
USH1G-201ENST00000579243 SYT2Q8N9I0 419 aaPredicted RBP21.97■■□□□ 1.11
USH1G-201ENST00000579243 TMEM117Q9H0C3 514 aa21.97■■□□□ 1.11
USH1G-201ENST00000579243 FAM105AQ9NUU6 356 aa21.97■■□□□ 1.11
USH1G-201ENST00000579243 H3BNC9 293 aa21.96■■□□□ 1.11
USH1G-201ENST00000579243 ZNF623O75123 536 aa21.96■■□□□ 1.11
USH1G-201ENST00000579243 RB1P06400 928 aa21.96■■□□□ 1.11
USH1G-201ENST00000579243 CD44P16070 742 aaKnown RBP21.96■■□□□ 1.11
USH1G-201ENST00000579243 AXLP30530 894 aa21.96■■□□□ 1.11
USH1G-201ENST00000579243 CTNNB1P35222 781 aa21.96■■□□□ 1.11
USH1G-201ENST00000579243 NAMPTP43490 491 aa21.96■■□□□ 1.11
USH1G-201ENST00000579243 KMT5BQ4FZB7 885 aa21.96■■□□□ 1.11
USH1G-201ENST00000579243 SMYD4Q8IYR2 804 aaPredicted RBP21.96■■□□□ 1.11
USH1G-201ENST00000579243 CCDC47Q96A33 483 aaKnown RBP21.96■■□□□ 1.11
USH1G-201ENST00000579243 CASD1Q96PB1 797 aa21.96■■□□□ 1.11
USH1G-201ENST00000579243 GOLGA6L6A8MZA4 724 aa21.95■■□□□ 1.1
USH1G-201ENST00000579243 PPP1R3GB7ZBB8 358 aa21.95■■□□□ 1.1
USH1G-201ENST00000579243 RHOBTB3O94955 611 aa21.95■■□□□ 1.1
USH1G-201ENST00000579243 PLA2G4BP0C869 781 aa21.95■■□□□ 1.1
USH1G-201ENST00000579243 RAB27AP51159 221 aa21.95■■□□□ 1.1
USH1G-201ENST00000579243 SLC12A3P55017 1021 aa21.95■■□□□ 1.1
USH1G-201ENST00000579243 ASIC1P78348 528 aa21.95■■□□□ 1.1
USH1G-201ENST00000579243 NCBP1Q09161 790 aaKnown RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms