RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 EMSYQ7Z589 1322 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 DNM1LO00429 736 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 NKRFO15226 690 aaKnown RBP eCLIP4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 STX6O43752 255 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 MSCO60682 206 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 LGR5O75473 907 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 GGPS1O95749 300 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 PGK1P00558 417 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 F2P00734 622 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 MMP3P08254 477 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 TXNP10599 105 aaKnown RBP4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 TGFB3P10600 412 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 GCFC2P16383 781 aaKnown RBP4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 EN2P19622 333 aaPredicted RBP4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 CDK7P50613 346 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 ADAM17P78536 824 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 PURAQ00577 322 aaKnown RBP4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 BEX3Q00994 111 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 TNFAIP2Q03169 654 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 ORC2Q13416 577 aaPredicted RBP4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 MTMR1Q13613 665 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 LARP1BQ659C4 914 aaKnown RBP4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 METTL7BQ6UX53 244 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 ABHD15Q6UXT9 468 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 SEPT14Q6ZU15 432 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 TLK2Q86UE8 772 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 FAM184AQ8NB25 1140 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 PPTC7Q8NI37 304 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 LRRC15Q8TF66 581 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 BCL7CQ8WUZ0 217 aaPredicted RBP4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 AFG1LQ8WV93 481 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 VWCEQ96DN2 955 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 C2orf49Q9BVC5 232 aaPredicted RBP4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 CWC22Q9HCG8 908 aaKnown RBP4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 XPNPEP3Q9NQH7 507 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 WRAP73Q9P2S5 460 aaPredicted RBP4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 FAM184BQ9ULE4 1060 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 CNPY2Q9Y2B0 182 aa4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 RBM19Q9Y4C8 960 aaKnown RBP4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 RANBP2P49792 3224 aaKnown RBP4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 COL4A4P53420 1690 aaPredicted RBP4.29□□□□□ -1.72
SMARCE1-215ENST00000578995 ELP1O95163 1332 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 A0A1W2PQ45 241 aaPredicted RBP4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 A0A1W2PQY0 241 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 IPO5O00410 1097 aaKnown RBP4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 TBX3O15119 743 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 DDX3YO15523 660 aaKnown RBP4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 MAFGO15525 162 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 ZNF862O60290 1169 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 ADAM11O75078 769 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 F13A1P00488 732 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 GH1P01241 217 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 LGALS2P05162 132 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 ASGR1P07306 291 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 RARBP10826 455 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 XBP1P17861 261 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 SOX11P35716 441 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 TRAPPC10P48553 1259 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 NASPP49321 788 aaPredicted RBP4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 ACLYP53396 1101 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 SOX10P56693 466 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 ACTR2P61160 394 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 ATP2C1P98194 919 aaPredicted RBP4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 SETQ01105 290 aaPredicted RBP4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 GRIN1Q05586 938 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 VAC14Q08AM6 782 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 PPP2R5CQ13362 524 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 TTLL4Q14679 1199 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 FSCN1Q16658 493 aaKnown RBP4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 UGCGQ16739 394 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 LETM2Q2VYF4 491 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 GNPTABQ3T906 1256 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 PRR16Q569H4 304 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 TTC38Q5R3I4 469 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 KCNV1Q6PIU1 500 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 CYFIP1Q7L576 1253 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 BRAPQ7Z569 592 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 ZAR1Q86SH2 424 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 FERMT3Q86UX7 667 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 SESTD1Q86VW0 696 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 PLA2G4DQ86XP0 818 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 TRIM50Q86XT4 487 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 CCDC60Q8IWA6 550 aaPredicted RBP4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 SHISA5Q8N114 240 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 LINC01465Q8N7H1 131 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 IGSF22Q8N9C0 903 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 TPCN2Q8NHX9 752 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 AFAP1L1Q8TED9 768 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 WNT8BQ93098 351 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 UIMC1Q96RL1 719 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 USP28Q96RU2 1077 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 RIT2Q99578 217 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 MMTAG2Q9BU76 263 aaKnown RBP4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 RUSC1Q9BVN2 902 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 UNC45AQ9H3U1 944 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 DDX25Q9UHL0 483 aaKnown RBP4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 PLXNA4Q9HCM2 1894 aa4.28□□□□□ -1.72
SMARCE1-215ENST00000578995 CCDC194A0A1B0GVG4 234 aa4.27□□□□□ -1.73
SMARCE1-215ENST00000578995 VPS37CA5D8V6 355 aaPredicted RBP4.27□□□□□ -1.73
SMARCE1-215ENST00000578995 B4DLN1 442 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms