RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 NCOA5Q9HCD5 579 aaKnown RBP13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 MARCH5Q9NX47 278 aa13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 CA14Q9ULX7 337 aa13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 SNX14Q9Y5W7 946 aa13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 FRYLO94915 3013 aa13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 DMXL1Q9Y485 3027 aa13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 TDRD15B5MCY1 1934 aaKnown RBP13□□□□□ -0.33
CTDNEP1-212ENST00000576613 ARID2Q68CP9 1835 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 KRBA1A5PL33 1030 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 ARL5CA6NH57 179 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 ASAP2O43150 1006 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 RFPL2O75678 378 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 DEXIO95424 95 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 C1RP00736 705 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 P4HBP07237 508 aaKnown RBP13□□□□□ -0.33
CTDNEP1-212ENST00000576613 PDIA3P30101 505 aaKnown RBP13□□□□□ -0.33
CTDNEP1-212ENST00000576613 AXLP30530 894 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 HOXA11P31270 313 aaPredicted RBP13□□□□□ -0.33
CTDNEP1-212ENST00000576613 HSPA4P34932 840 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 NPEPPSP55786 919 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 UBXN11Q5T124 520 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 NOTUMQ6P988 496 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 OTUD6AQ7L8S5 288 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 KRT25Q7Z3Z0 450 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 COLGALT2Q8IYK4 626 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 HACE1Q8IYU2 909 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 SLC44A3Q8N4M1 653 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 RNF149Q8NC42 400 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 DAGLBQ8NCG7 672 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 RSAD2Q8WXG1 361 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 TMEM143Q96AN5 459 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 CCDC51Q96ER9 411 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 FAM20AQ96MK3 541 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 PLEKHA4Q9H4M7 779 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 MINDY3Q9H8M7 445 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 TBC1D17Q9HA65 648 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 RXFP1Q9HBX9 757 aa13□□□□□ -0.33
CTDNEP1-212ENST00000576613 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13□□□□□ -0.33
CTDNEP1-212ENST00000576613 EML1O00423 815 aa12.99□□□□□ -0.33
CTDNEP1-212ENST00000576613 CPLX1O14810 134 aa12.99□□□□□ -0.33
CTDNEP1-212ENST00000576613 MLH1P40692 756 aa12.99□□□□□ -0.33
CTDNEP1-212ENST00000576613 EVCP57679 992 aa12.99□□□□□ -0.33
CTDNEP1-212ENST00000576613 DSG1Q02413 1049 aa12.99□□□□□ -0.33
CTDNEP1-212ENST00000576613 CREMQ03060 361 aa12.99□□□□□ -0.33
CTDNEP1-212ENST00000576613 DSC1Q08554 894 aa12.99□□□□□ -0.33
CTDNEP1-212ENST00000576613 KIAA0319Q5VV43 1072 aa12.99□□□□□ -0.33
CTDNEP1-212ENST00000576613 PHLDB3Q6NSJ2 640 aa12.99□□□□□ -0.33
CTDNEP1-212ENST00000576613 TAS1R1Q7RTX1 841 aa12.99□□□□□ -0.33
CTDNEP1-212ENST00000576613 FERMT3Q86UX7 667 aa12.99□□□□□ -0.33
CTDNEP1-212ENST00000576613 RNF168Q8IYW5 571 aaPredicted RBP12.99□□□□□ -0.33
CTDNEP1-212ENST00000576613 SMG8Q8ND04 991 aaKnown RBP12.99□□□□□ -0.33
CTDNEP1-212ENST00000576613 MYADMQ96S97 322 aa12.99□□□□□ -0.33
CTDNEP1-212ENST00000576613 COLEC11Q9BWP8 271 aa12.99□□□□□ -0.33
CTDNEP1-212ENST00000576613 TRIM6Q9C030 488 aaPredicted RBP12.99□□□□□ -0.33
CTDNEP1-212ENST00000576613 ARHGEF3Q9NR81 526 aa12.99□□□□□ -0.33
CTDNEP1-212ENST00000576613 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.99□□□□□ -0.33
CTDNEP1-212ENST00000576613 ZDHHC7Q9NXF8 308 aa12.99□□□□□ -0.33
CTDNEP1-212ENST00000576613 VAV3Q9UKW4 847 aa12.99□□□□□ -0.33
CTDNEP1-212ENST00000576613 IPPQ9Y573 584 aa12.99□□□□□ -0.33
CTDNEP1-212ENST00000576613 MTCL1Q9Y4B5 1905 aaKnown RBP12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 M0R2N6 131 aa12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 SLC37A4O43826 429 aa12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 PAPLNO95428 1278 aa12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 MYBP10242 640 aa12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 LAMP2P13473 410 aa12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 GCFC2P16383 781 aaKnown RBP12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 YWHABP31946 246 aaKnown RBP12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 MXD4Q14582 209 aaPredicted RBP12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 EMC2Q15006 297 aa12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 INF2Q27J81 1249 aa12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 SPECC1Q5M775 1068 aa12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 CPLX2Q6PUV4 134 aaKnown RBP12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 GET4Q7L5D6 327 aaPredicted RBP12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 PALB2Q86YC2 1186 aa12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 C4orf19Q8IY42 314 aa12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 GPR65Q8IYL9 337 aa12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 ZNF579Q8NAF0 562 aaKnown RBP12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 GPR152Q8TDT2 470 aa12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 ZNF707Q96C28 371 aaPredicted RBP12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 ZFP42Q96MM3 310 aa12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 GAD1Q99259 594 aa12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 HINFPQ9BQA5 517 aa12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 LXNQ9BS40 222 aa12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 KCNMB3Q9NPA1 279 aa12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 CHST7Q9NS84 486 aa12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 BMP2KQ9NSY1 1161 aaPredicted RBP12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 SIT1Q9Y3P8 196 aa12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 ZFP37Q9Y6Q3 630 aaPredicted RBP12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 R4GN57 208 aa12.98□□□□□ -0.33
CTDNEP1-212ENST00000576613 DOCK8Q8NF50 2099 aa12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 EP300Q09472 2414 aaPredicted RBP12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 CCDC194A0A1B0GVG4 234 aa12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 TGM5O43548 720 aa12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 MARCH6O60337 910 aa12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 TSPAN1O60635 241 aa12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 EFEMP2O95967 443 aa12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 SPATA31D3P0C874 917 aa12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 SCNN1GP51170 649 aa12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 TFDP1Q14186 410 aa12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 USP41Q3LFD5 358 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms