RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 FAM13BQ9NYF5 915 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 ANKFY1Q9P2R3 1169 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 INPP5FQ9Y2H2 1132 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 MRPL42Q9Y6G3 142 aaKnown RBP8.71□□□□□ -1.02
CCDC40-215ENST00000576033 SQORQ9Y6N5 450 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 PHLPP2Q6ZVD8 1323 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 FAM237AA0A1B0GTK4 181 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.7□□□□□ -1.02
CCDC40-215ENST00000576033 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.7□□□□□ -1.02
CCDC40-215ENST00000576033 GOLGA6L3A6NEY3 463 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 TBKBP1A7MCY6 615 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 ANKRD63C9JTQ0 380 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 ABLIM1O14639 778 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 ASAP2O43150 1006 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 SLC26A4O43511 780 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 NR1I2O75469 434 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 DGKIO75912 1065 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 RPLP2P05387 115 aaKnown RBP8.7□□□□□ -1.02
CCDC40-215ENST00000576033 CMA1P23946 247 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 IGFBP6P24592 240 aaPredicted RBP8.7□□□□□ -1.02
CCDC40-215ENST00000576033 SYKP43405 635 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 MRE11P49959 708 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 OSTNP61366 133 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 ASIC1P78348 528 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 HTRA4P83105 476 aaPredicted RBP8.7□□□□□ -1.02
CCDC40-215ENST00000576033 TAP1Q03518 808 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 PRPF4BQ13523 1007 aaKnown RBP8.7□□□□□ -1.02
CCDC40-215ENST00000576033 SNW1Q13573 536 aaKnown RBP8.7□□□□□ -1.02
CCDC40-215ENST00000576033 GRIN2CQ14957 1233 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 L1TD1Q5T7N2 865 aaKnown RBP8.7□□□□□ -1.02
CCDC40-215ENST00000576033 PPP2R2DQ66LE6 453 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 LRSAM1Q6UWE0 723 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 AGMOQ6ZNB7 445 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 LRRC55Q6ZSA7 311 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 NPAS4Q8IUM7 802 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 ZBTB8OSQ8IWT0 167 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 FMR1NBQ8N0W7 255 aaPredicted RBP8.7□□□□□ -1.02
CCDC40-215ENST00000576033 ARNTL2Q8WYA1 636 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 RABGGTAQ92696 567 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 ZNF689Q96CS4 500 aaPredicted RBP8.7□□□□□ -1.02
CCDC40-215ENST00000576033 PAGE5Q96GU1 130 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 IFT74Q96LB3 600 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 ZFP42Q96MM3 310 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 FUCA2Q9BTY2 467 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 FTHL17Q9BXU8 183 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 NFKBIZQ9BYH8 718 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 CDT1Q9H211 546 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 MTIF3Q9H2K0 278 aaKnown RBP8.7□□□□□ -1.02
CCDC40-215ENST00000576033 TNMDQ9H2S6 317 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 PRDM12Q9H4Q4 367 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 PARVGQ9HBI0 331 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 KLK14Q9P0G3 267 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 ODF2LQ9ULJ1 636 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 PLAGL2Q9UPG8 496 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 IPPQ9Y573 584 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 PCDHB2Q9Y5E7 798 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 PCDHGC5Q9Y5F6 944 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 CITO14578 2027 aa8.7□□□□□ -1.02
CCDC40-215ENST00000576033 A0A1W2PQ27 194 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 A0A1W2PQ64 194 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 A0A1W2PQD8 194 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 FRMD3A2A2Y4 597 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 KLRC4O43908 158 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 PPP1R37O75864 691 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 PRPF6O94906 941 aaKnown RBP8.69□□□□□ -1.02
CCDC40-215ENST00000576033 ZSCAN20P17040 1043 aaPredicted RBP8.69□□□□□ -1.02
CCDC40-215ENST00000576033 HOXD13P35453 343 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 MLH1P40692 756 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 PNOCQ13519 176 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 MAPK6Q16659 721 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 TMEM132AQ24JP5 1023 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 GLRA4Q5JXX5 417 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 ATF7IP2Q5U623 682 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 PPP4R3CPQ6ZMV5 832 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 SLC24A5Q71RS6 500 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 HAUS6Q7Z4H7 955 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 TMEM173Q86WV6 379 aaPredicted RBP8.69□□□□□ -1.02
CCDC40-215ENST00000576033 FAM178BQ8IXR5 827 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 EXOC8Q8IYI6 725 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 ENGASEQ8NFI3 743 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 SP7Q8TDD2 431 aaPredicted RBP8.69□□□□□ -1.02
CCDC40-215ENST00000576033 BCL7CQ8WUZ0 217 aaPredicted RBP8.69□□□□□ -1.02
CCDC40-215ENST00000576033 MYLIPQ8WY64 445 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 CASD1Q96PB1 797 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 ACO2Q99798 780 aaKnown RBP8.69□□□□□ -1.02
CCDC40-215ENST00000576033 PANK4Q9NVE7 773 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 PRMT7Q9NVM4 692 aaPredicted RBP8.69□□□□□ -1.02
CCDC40-215ENST00000576033 MIOSQ9NXC5 875 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 SNTG2Q9NY99 539 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 DNAJB4Q9UDY4 337 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 GDAQ9Y2T3 454 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 PCDHA11Q9Y5I1 949 aa8.69□□□□□ -1.02
CCDC40-215ENST00000576033 C5orf42Q9H799 3197 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 A0A0U1RQF3 1178 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 A0A1B0GUA9 196 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 NT5C1B-RDH14C9J2C7 533 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 K7ERI5 159 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 ACKR2O00590 384 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 EFCAB14O75071 495 aa8.68□□□□□ -1.02
CCDC40-215ENST00000576033 RECQL4O94761 1208 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms