RNA–Protein interactions for RNA: ENST00000575707.5

TRAP1-213, Transcript of TNF receptor associated protein 1, humanhuman

TSL 5

Gene TRAP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-213ENST00000575707 HOXD11P31277 338 aaPredicted RBP18.35■□□□□ 0.53
TRAP1-213ENST00000575707 CATSPER3Q86XQ3 398 aa18.35■□□□□ 0.53
TRAP1-213ENST00000575707 POLR3CQ9BUI4 534 aaPredicted RBP18.35■□□□□ 0.53
TRAP1-213ENST00000575707 POLR3FQ9H1D9 316 aaPredicted RBP18.35■□□□□ 0.53
TRAP1-213ENST00000575707 FOXP1Q9H334 677 aaPredicted RBP18.35■□□□□ 0.53
TRAP1-213ENST00000575707 DBR1Q9UK59 544 aaKnown RBP18.35■□□□□ 0.53
TRAP1-213ENST00000575707 TDRD15B5MCY1 1934 aaKnown RBP18.34■□□□□ 0.53
TRAP1-213ENST00000575707 NRP1O14786 923 aa18.34■□□□□ 0.53
TRAP1-213ENST00000575707 USO1O60763 962 aaKnown RBP18.34■□□□□ 0.53
TRAP1-213ENST00000575707 MTHFRP42898 656 aa18.34■□□□□ 0.53
TRAP1-213ENST00000575707 HMGN5P82970 282 aaKnown RBP18.34■□□□□ 0.53
TRAP1-213ENST00000575707 PPFIBP1Q86W92 1011 aa18.34■□□□□ 0.53
TRAP1-213ENST00000575707 COLGALT2Q8IYK4 626 aa18.34■□□□□ 0.53
TRAP1-213ENST00000575707 MCPH1Q8NEM0 835 aa18.34■□□□□ 0.53
TRAP1-213ENST00000575707 FBXO18Q8NFZ0 1043 aa18.34■□□□□ 0.53
TRAP1-213ENST00000575707 SLC22A17Q8WUG5 538 aa18.34■□□□□ 0.53
TRAP1-213ENST00000575707 ZSCAN31Q96LW9 406 aaPredicted RBP18.34■□□□□ 0.53
TRAP1-213ENST00000575707 RIPOR3Q96MK2 946 aa18.34■□□□□ 0.53
TRAP1-213ENST00000575707 RNF39Q9H2S5 420 aa18.34■□□□□ 0.53
TRAP1-213ENST00000575707 POMKQ9H5K3 350 aa18.34■□□□□ 0.53
TRAP1-213ENST00000575707 CDH22Q9UJ99 828 aa18.34■□□□□ 0.53
TRAP1-213ENST00000575707 GIT1Q9Y2X7 761 aa18.34■□□□□ 0.53
TRAP1-213ENST00000575707 HES2Q9Y543 173 aa18.34■□□□□ 0.53
TRAP1-213ENST00000575707 TMEM221A6NGB7 291 aa18.33■□□□□ 0.52
TRAP1-213ENST00000575707 ARL5CA6NH57 179 aa18.33■□□□□ 0.52
TRAP1-213ENST00000575707 M0R296 226 aa18.33■□□□□ 0.52
TRAP1-213ENST00000575707 LILRB3O75022 631 aa18.33■□□□□ 0.52
TRAP1-213ENST00000575707 MED24O75448 989 aa18.33■□□□□ 0.52
TRAP1-213ENST00000575707 OR52Z1P0C646 297 aa18.33■□□□□ 0.52
TRAP1-213ENST00000575707 EPCAMP16422 314 aa18.33■□□□□ 0.52
TRAP1-213ENST00000575707 MLH1P40692 756 aa18.33■□□□□ 0.52
TRAP1-213ENST00000575707 DSC1Q08554 894 aa18.33■□□□□ 0.52
TRAP1-213ENST00000575707 SIGLEC14Q08ET2 396 aa18.33■□□□□ 0.52
TRAP1-213ENST00000575707 PTPN21Q16825 1174 aa18.33■□□□□ 0.52
TRAP1-213ENST00000575707 HACE1Q8IYU2 909 aa18.33■□□□□ 0.52
TRAP1-213ENST00000575707 ERMNQ8TAM6 284 aa18.33■□□□□ 0.52
TRAP1-213ENST00000575707 NACC1Q96RE7 527 aa18.33■□□□□ 0.52
TRAP1-213ENST00000575707 GAD1Q99259 594 aa18.33■□□□□ 0.52
TRAP1-213ENST00000575707 EMILIN2Q9BXX0 1053 aa18.33■□□□□ 0.52
TRAP1-213ENST00000575707 TRIM6Q9C030 488 aaPredicted RBP18.33■□□□□ 0.52
TRAP1-213ENST00000575707 SH2B1Q9NRF2 756 aaPredicted RBP18.33■□□□□ 0.52
TRAP1-213ENST00000575707 MARCH5Q9NX47 278 aa18.33■□□□□ 0.52
TRAP1-213ENST00000575707 ZMYM2Q9UBW7 1377 aa18.32■□□□□ 0.52
TRAP1-213ENST00000575707 A0A087WWV3 80 aa18.32■□□□□ 0.52
TRAP1-213ENST00000575707 A0A1B0GUA9 196 aa18.32■□□□□ 0.52
TRAP1-213ENST00000575707 SOD2P04179 222 aa18.32■□□□□ 0.52
TRAP1-213ENST00000575707 RPA1P27694 616 aa18.32■□□□□ 0.52
TRAP1-213ENST00000575707 RBM25P49756 843 aaKnown RBP18.32■□□□□ 0.52
TRAP1-213ENST00000575707 SCNN1GP51170 649 aa18.32■□□□□ 0.52
TRAP1-213ENST00000575707 ZNF174Q15697 407 aa18.32■□□□□ 0.52
TRAP1-213ENST00000575707 RARS2Q5T160 578 aaKnown RBP18.32■□□□□ 0.52
TRAP1-213ENST00000575707 CDCA2Q69YH5 1023 aaPredicted RBP18.32■□□□□ 0.52
TRAP1-213ENST00000575707 KIAA1841Q6NSI8 718 aa18.32■□□□□ 0.52
TRAP1-213ENST00000575707 SLC27A1Q6PCB7 646 aa18.32■□□□□ 0.52
TRAP1-213ENST00000575707 PBXIP1Q96AQ6 731 aa18.32■□□□□ 0.52
TRAP1-213ENST00000575707 PRIMPOLQ96LW4 560 aa18.32■□□□□ 0.52
TRAP1-213ENST00000575707 ZFP42Q96MM3 310 aa18.32■□□□□ 0.52
TRAP1-213ENST00000575707 KLHL5Q96PQ7 755 aa18.32■□□□□ 0.52
TRAP1-213ENST00000575707 NXF3Q9H4D5 531 aaKnown RBP18.32■□□□□ 0.52
TRAP1-213ENST00000575707 GPRC5CQ9NQ84 441 aa18.32■□□□□ 0.52
TRAP1-213ENST00000575707 LRRIQ4A6NIV6 560 aa18.31■□□□□ 0.52
TRAP1-213ENST00000575707 B4GALT5O43286 388 aa18.31■□□□□ 0.52
TRAP1-213ENST00000575707 MUTP22033 750 aa18.31■□□□□ 0.52
TRAP1-213ENST00000575707 SP100P23497 879 aaPredicted RBP18.31■□□□□ 0.52
TRAP1-213ENST00000575707 OR1G1P47890 313 aa18.31■□□□□ 0.52
TRAP1-213ENST00000575707 TRAPPC10P48553 1259 aa18.31■□□□□ 0.52
TRAP1-213ENST00000575707 CLCN4P51793 760 aa18.31■□□□□ 0.52
TRAP1-213ENST00000575707 TTC38Q5R3I4 469 aa18.31■□□□□ 0.52
TRAP1-213ENST00000575707 ATAT1Q5SQI0 421 aa18.31■□□□□ 0.52
TRAP1-213ENST00000575707 POTEGQ6S5H5 508 aa18.31■□□□□ 0.52
TRAP1-213ENST00000575707 MAEAQ7L5Y9 396 aa18.31■□□□□ 0.52
TRAP1-213ENST00000575707 CABP7Q86V35 215 aa18.31■□□□□ 0.52
TRAP1-213ENST00000575707 NOSTRINQ8IVI9 506 aa18.31■□□□□ 0.52
TRAP1-213ENST00000575707 RNF168Q8IYW5 571 aaPredicted RBP18.31■□□□□ 0.52
TRAP1-213ENST00000575707 C12orf76Q8N812 135 aaPredicted RBP18.31■□□□□ 0.52
TRAP1-213ENST00000575707 FBXL18Q96ME1 805 aa18.31■□□□□ 0.52
TRAP1-213ENST00000575707 KIF2CQ99661 725 aa18.31■□□□□ 0.52
TRAP1-213ENST00000575707 HERC2P3Q9BVR0 1158 aa18.31■□□□□ 0.52
TRAP1-213ENST00000575707 TSHZ2Q9NRE2 1034 aa18.31■□□□□ 0.52
TRAP1-213ENST00000575707 MRPL17Q9NRX2 175 aaKnown RBP18.31■□□□□ 0.52
TRAP1-213ENST00000575707 PRMT7Q9NVM4 692 aaPredicted RBP18.31■□□□□ 0.52
TRAP1-213ENST00000575707 MIOSQ9NXC5 875 aa18.31■□□□□ 0.52
TRAP1-213ENST00000575707 SSX2IPQ9Y2D8 614 aa18.31■□□□□ 0.52
TRAP1-213ENST00000575707 PRG3Q9Y2Y8 225 aaPredicted RBP18.31■□□□□ 0.52
TRAP1-213ENST00000575707 C2CD4DB7Z1M9 353 aa18.3■□□□□ 0.52
TRAP1-213ENST00000575707 NR1I2O75469 434 aa18.3■□□□□ 0.52
TRAP1-213ENST00000575707 NPTXRO95502 500 aa18.3■□□□□ 0.52
TRAP1-213ENST00000575707 EFEMP2O95967 443 aa18.3■□□□□ 0.52
TRAP1-213ENST00000575707 SSBP05455 408 aaKnown RBP eCLIP18.3■□□□□ 0.52
TRAP1-213ENST00000575707 CNPP09543 421 aaKnown RBP18.3■□□□□ 0.52
TRAP1-213ENST00000575707 KLRC2P26717 231 aa18.3■□□□□ 0.52
TRAP1-213ENST00000575707 GNL2Q13823 731 aaKnown RBP18.3■□□□□ 0.52
TRAP1-213ENST00000575707 FAM187BQ17R55 369 aa18.3■□□□□ 0.52
TRAP1-213ENST00000575707 HAUS3Q68CZ6 603 aa18.3■□□□□ 0.52
TRAP1-213ENST00000575707 ZBTB8OSQ8IWT0 167 aa18.3■□□□□ 0.52
TRAP1-213ENST00000575707 FAM184AQ8NB25 1140 aa18.3■□□□□ 0.52
TRAP1-213ENST00000575707 ASIC4Q96FT7 647 aa18.3■□□□□ 0.52
TRAP1-213ENST00000575707 APOL6Q9BWW8 343 aa18.3■□□□□ 0.52
TRAP1-213ENST00000575707 FZD8Q9H461 694 aa18.3■□□□□ 0.52
TRAP1-213ENST00000575707 SFXN1Q9H9B4 322 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms