RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 SMG8Q8ND04 991 aaKnown RBP11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 CCDC148Q8NFR7 591 aa11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 ETNPPLQ8TBG4 499 aa11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 PRPF31Q8WWY3 499 aaKnown RBP11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 SMG7Q92540 1137 aaKnown RBP11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 RUBCNQ92622 972 aa11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 RNF26Q9BY78 433 aaPredicted RBP11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 NT5C3AQ9H0P0 336 aa11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 PLEKHA4Q9H4M7 779 aa11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 UBN1Q9NPG3 1134 aa11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 SH3GLB2Q9NR46 395 aa11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 SLC2A4RGQ9NR83 387 aa11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 VPS54Q9P1Q0 977 aa11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 COL4A3BPQ9Y5P4 624 aa11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 M0R2N6 131 aa11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 GAS2O43903 313 aaKnown RBP11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 TDP2O95551 362 aa11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 SPATA31D3P0C874 917 aa11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 SRGAP2CP0DJJ0 459 aa11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 MYBP10242 640 aa11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 CPA1P15085 419 aa11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 IFNAR1P17181 557 aa11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 GLUD2P49448 558 aa11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 NPEPPSP55786 919 aa11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 STARD6P59095 220 aa11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 AKAP17AQ02040 695 aaKnown RBP11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 LAMTOR4Q0VGL1 99 aa11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 HTR4Q13639 388 aa11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 PLA2G4FQ68DD2 849 aa11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 DCLRE1AQ6PJP8 1040 aa11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 ZC3H14Q6PJT7 736 aaKnown RBP11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 SPATA31D4Q6ZUB0 917 aa11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 MAML2Q8IZL2 1156 aaPredicted RBP11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 DCLK2Q8N568 766 aa11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 SUMF1Q8NBK3 374 aa11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 CNNM3Q8NE01 707 aa11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 KCNB2Q92953 911 aa11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 BRF1Q92994 677 aa11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 AGXT2Q9BYV1 514 aa11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 PRKD2Q9BZL6 878 aa11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 DHX33Q9H6R0 707 aaKnown RBP11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 ARHGEF3Q9NR81 526 aa11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 MIOSQ9NXC5 875 aa11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 ZDHHC7Q9NXF8 308 aa11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 PRG3Q9Y2Y8 225 aaPredicted RBP11.16□□□□□ -0.62
CALCOCO2-227ENST00000575560 EPG5Q9HCE0 2579 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 GPR179Q6PRD1 2367 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 ARL5CA6NH57 179 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 POTEMA6NI47 508 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 F8W810 466 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 EML1O00423 815 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 TGM5O43548 720 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 ITGA4P13612 1032 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 RFX1P22670 979 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 OR1G1P47890 313 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 QARSP47897 775 aaKnown RBP11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 NLRP5P59047 1200 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 FGD1P98174 961 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 BMP2KLQ5H9B9 411 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 MOXD1Q6UVY6 613 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 PALB2Q86YC2 1186 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 EXOC8Q8IYI6 725 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 PJA1Q8NG27 643 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 PSPC1Q8WXF1 523 aaKnown RBP11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 SLC7A3Q8WY07 619 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 TMEM143Q96AN5 459 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 BORCS6Q96GS4 357 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 SLC26A6Q9BXS9 759 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 C22orf23Q9BZE7 217 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 FNIP2Q9P278 1114 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 WRAP73Q9P2S5 460 aaPredicted RBP11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 PCDHA4Q9UN74 947 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 PPME1Q9Y570 386 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 IPPQ9Y573 584 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 ZFP37Q9Y6Q3 630 aaPredicted RBP11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 NUMBLQ9Y6R0 609 aa11.15□□□□□ -0.62
CALCOCO2-227ENST00000575560 DOCK8Q8NF50 2099 aa11.15□□□□□ -0.63
CALCOCO2-227ENST00000575560 CACNA1IQ9P0X4 2223 aa11.15□□□□□ -0.63
CALCOCO2-227ENST00000575560 ASAP2O43150 1006 aa11.14□□□□□ -0.63
CALCOCO2-227ENST00000575560 LRRN2O75325 713 aa11.14□□□□□ -0.63
CALCOCO2-227ENST00000575560 EVCP57679 992 aa11.14□□□□□ -0.63
CALCOCO2-227ENST00000575560 GPC5P78333 572 aa11.14□□□□□ -0.63
CALCOCO2-227ENST00000575560 PPP2R5CQ13362 524 aa11.14□□□□□ -0.63
CALCOCO2-227ENST00000575560 PCBP1Q15365 356 aaKnown RBP eCLIP11.14□□□□□ -0.638e-6■■■■□ 23.1
CALCOCO2-227ENST00000575560 NPY5RQ15761 445 aa11.14□□□□□ -0.63
CALCOCO2-227ENST00000575560 ZNF528Q3MIS6 628 aa11.14□□□□□ -0.63
CALCOCO2-227ENST00000575560 GSTCDQ8NEC7 633 aa11.14□□□□□ -0.63
CALCOCO2-227ENST00000575560 SHDQ96IW2 340 aa11.14□□□□□ -0.63
CALCOCO2-227ENST00000575560 CEP170P1Q96L14 293 aa11.14□□□□□ -0.63
CALCOCO2-227ENST00000575560 ZFP42Q96MM3 310 aa11.14□□□□□ -0.63
CALCOCO2-227ENST00000575560 GAD1Q99259 594 aa11.14□□□□□ -0.63
CALCOCO2-227ENST00000575560 RPP25Q9BUL9 199 aaKnown RBP11.14□□□□□ -0.63
CALCOCO2-227ENST00000575560 DDX23Q9BUQ8 820 aaKnown RBP11.14□□□□□ -0.63
CALCOCO2-227ENST00000575560 EIF2AQ9BY44 585 aaKnown RBP11.14□□□□□ -0.63
CALCOCO2-227ENST00000575560 GPR62Q9BZJ7 368 aa11.14□□□□□ -0.63
CALCOCO2-227ENST00000575560 FOXQ1Q9C009 403 aa11.14□□□□□ -0.63
CALCOCO2-227ENST00000575560 PIDD1Q9HB75 910 aa11.14□□□□□ -0.63
CALCOCO2-227ENST00000575560 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.14□□□□□ -0.63
CALCOCO2-227ENST00000575560 VAV3Q9UKW4 847 aa11.14□□□□□ -0.63
CALCOCO2-227ENST00000575560 FANCMQ8IYD8 2048 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms