RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 PRG3Q9Y2Y8 225 aaPredicted RBP10.08□□□□□ -0.8
SMG6-218ENST00000575454 PCDHGA2Q9Y5H1 932 aa10.08□□□□□ -0.8
SMG6-218ENST00000575454 COL4A3BPQ9Y5P4 624 aa10.08□□□□□ -0.8
SMG6-218ENST00000575454 CYP3A7-CYP3A51PA0A087WV96 503 aa10.07□□□□□ -0.8
SMG6-218ENST00000575454 PRR5-ARHGAP8B1AHC4 643 aa10.07□□□□□ -0.8
SMG6-218ENST00000575454 LAMTOR5O43504 91 aa10.07□□□□□ -0.8
SMG6-218ENST00000575454 RFPL2O75678 378 aa10.07□□□□□ -0.8
SMG6-218ENST00000575454 KRT37O76014 449 aa10.07□□□□□ -0.8
SMG6-218ENST00000575454 POMCP01189 267 aa10.07□□□□□ -0.8
SMG6-218ENST00000575454 ITGA4P13612 1032 aa10.07□□□□□ -0.8
SMG6-218ENST00000575454 CYP3A7P24462 503 aa10.07□□□□□ -0.8
SMG6-218ENST00000575454 ARHGAP8P85298 464 aa10.07□□□□□ -0.8
SMG6-218ENST00000575454 PFKPQ01813 784 aa10.07□□□□□ -0.8
SMG6-218ENST00000575454 HTR4Q13639 388 aa10.07□□□□□ -0.8
SMG6-218ENST00000575454 RSPO4Q2I0M5 234 aaPredicted RBP10.07□□□□□ -0.8
SMG6-218ENST00000575454 USP41Q3LFD5 358 aa10.07□□□□□ -0.8
SMG6-218ENST00000575454 COLGALT2Q8IYK4 626 aa10.07□□□□□ -0.8
SMG6-218ENST00000575454 HACE1Q8IYU2 909 aa10.07□□□□□ -0.8
SMG6-218ENST00000575454 FEZF2Q8TBJ5 459 aa10.07□□□□□ -0.8
SMG6-218ENST00000575454 ATRIPQ8WXE1 791 aa10.07□□□□□ -0.8
SMG6-218ENST00000575454 PSPC1Q8WXF1 523 aaKnown RBP10.07□□□□□ -0.8
SMG6-218ENST00000575454 ZNF707Q96C28 371 aaPredicted RBP10.07□□□□□ -0.8
SMG6-218ENST00000575454 OSBPL6Q9BZF3 934 aa10.07□□□□□ -0.8
SMG6-218ENST00000575454 SH3GLB2Q9NR46 395 aa10.07□□□□□ -0.8
SMG6-218ENST00000575454 CHST7Q9NS84 486 aa10.07□□□□□ -0.8
SMG6-218ENST00000575454 FNIP2Q9P278 1114 aa10.07□□□□□ -0.8
SMG6-218ENST00000575454 KANSL1LA0AUZ9 987 aa10.06□□□□□ -0.8
SMG6-218ENST00000575454 ARL5CA6NH57 179 aa10.06□□□□□ -0.8
SMG6-218ENST00000575454 TGM5O43548 720 aa10.06□□□□□ -0.8
SMG6-218ENST00000575454 B4GALT3O60512 393 aa10.06□□□□□ -0.8
SMG6-218ENST00000575454 STBD1O95210 358 aa10.06□□□□□ -0.8
SMG6-218ENST00000575454 FSHRP23945 695 aa10.06□□□□□ -0.8
SMG6-218ENST00000575454 AXLP30530 894 aa10.06□□□□□ -0.8
SMG6-218ENST00000575454 HOXA11P31270 313 aaPredicted RBP10.06□□□□□ -0.8
SMG6-218ENST00000575454 RFC5P40937 340 aa10.06□□□□□ -0.8
SMG6-218ENST00000575454 AFF1P51825 1210 aaKnown RBP10.06□□□□□ -0.8
SMG6-218ENST00000575454 NLRP5P59047 1200 aa10.06□□□□□ -0.8
SMG6-218ENST00000575454 LMNB2Q03252 620 aa10.06□□□□□ -0.8
SMG6-218ENST00000575454 PRKCQQ04759 706 aa10.06□□□□□ -0.8
SMG6-218ENST00000575454 VARS2Q5ST30 1063 aaKnown RBP10.06□□□□□ -0.8
SMG6-218ENST00000575454 B3GNT9Q6UX72 402 aa10.06□□□□□ -0.8
SMG6-218ENST00000575454 RSPO2Q6UXX9 243 aaPredicted RBP10.06□□□□□ -0.8
SMG6-218ENST00000575454 ANO5Q75V66 913 aa10.06□□□□□ -0.8
SMG6-218ENST00000575454 MTSS1LQ765P7 747 aa10.06□□□□□ -0.8
SMG6-218ENST00000575454 GET4Q7L5D6 327 aaPredicted RBP10.06□□□□□ -0.8
SMG6-218ENST00000575454 TAS1R1Q7RTX1 841 aa10.06□□□□□ -0.8
SMG6-218ENST00000575454 PALB2Q86YC2 1186 aa10.06□□□□□ -0.8
SMG6-218ENST00000575454 KSR1Q8IVT5 923 aa10.06□□□□□ -0.8
SMG6-218ENST00000575454 RNF168Q8IYW5 571 aaPredicted RBP10.06□□□□□ -0.8
SMG6-218ENST00000575454 SUMF1Q8NBK3 374 aa10.06□□□□□ -0.8
SMG6-218ENST00000575454 TBCKQ8TEA7 893 aa10.06□□□□□ -0.8
SMG6-218ENST00000575454 TCP11Q8WWU5 503 aa10.06□□□□□ -0.8
SMG6-218ENST00000575454 PRPF31Q8WWY3 499 aaKnown RBP10.06□□□□□ -0.8
SMG6-218ENST00000575454 RNF26Q9BY78 433 aaPredicted RBP10.06□□□□□ -0.8
SMG6-218ENST00000575454 SPATA6Q9NWH7 488 aaPredicted RBP10.06□□□□□ -0.8
SMG6-218ENST00000575454 MARCH5Q9NX47 278 aa10.06□□□□□ -0.8
SMG6-218ENST00000575454 NCDNQ9UBB6 729 aa10.06□□□□□ -0.8
SMG6-218ENST00000575454 CDH7Q9ULB5 785 aa10.06□□□□□ -0.8
SMG6-218ENST00000575454 GIT1Q9Y2X7 761 aa10.06□□□□□ -0.8
SMG6-218ENST00000575454 NUMBLQ9Y6R0 609 aa10.06□□□□□ -0.8
SMG6-218ENST00000575454 ZFYVE26Q68DK2 2539 aa10.05□□□□□ -0.8
SMG6-218ENST00000575454 NCAM2O15394 837 aa10.05□□□□□ -0.8
SMG6-218ENST00000575454 ZMYND10O75800 440 aa10.05□□□□□ -0.8
SMG6-218ENST00000575454 ERLIN2O94905 339 aa10.05□□□□□ -0.8
SMG6-218ENST00000575454 EFEMP2O95967 443 aa10.05□□□□□ -0.8
SMG6-218ENST00000575454 HNRNPA1P09651 372 aaKnown RBP eCLIP10.05□□□□□ -0.8
SMG6-218ENST00000575454 SPATA31D3P0C874 917 aa10.05□□□□□ -0.8
SMG6-218ENST00000575454 SRGAP2CP0DJJ0 459 aa10.05□□□□□ -0.8
SMG6-218ENST00000575454 QARSP47897 775 aaKnown RBP10.05□□□□□ -0.8
SMG6-218ENST00000575454 DSC1Q08554 894 aa10.05□□□□□ -0.8
SMG6-218ENST00000575454 LAMTOR4Q0VGL1 99 aa10.05□□□□□ -0.8
SMG6-218ENST00000575454 SLC44A4Q53GD3 710 aa10.05□□□□□ -0.8
SMG6-218ENST00000575454 UBXN11Q5T124 520 aa10.05□□□□□ -0.8
SMG6-218ENST00000575454 NOTUMQ6P988 496 aa10.05□□□□□ -0.8
SMG6-218ENST00000575454 LILRA6Q6PI73 481 aa10.05□□□□□ -0.8
SMG6-218ENST00000575454 MOXD1Q6UVY6 613 aa10.05□□□□□ -0.8
SMG6-218ENST00000575454 SPATA31D4Q6ZUB0 917 aa10.05□□□□□ -0.8
SMG6-218ENST00000575454 OTUD6AQ7L8S5 288 aa10.05□□□□□ -0.8
SMG6-218ENST00000575454 FAM177A1Q8N128 213 aaPredicted RBP10.05□□□□□ -0.8
SMG6-218ENST00000575454 DCLK2Q8N568 766 aa10.05□□□□□ -0.8
SMG6-218ENST00000575454 CEP170P1Q96L14 293 aa10.05□□□□□ -0.8
SMG6-218ENST00000575454 TCEANC2Q96MN5 208 aa10.05□□□□□ -0.8
SMG6-218ENST00000575454 NELL2Q99435 816 aa10.05□□□□□ -0.8
SMG6-218ENST00000575454 GPR179Q6PRD1 2367 aa10.05□□□□□ -0.8
SMG6-218ENST00000575454 MYH6P13533 1939 aa10.05□□□□□ -0.8
SMG6-218ENST00000575454 SETXQ7Z333 2677 aaKnown RBP10.05□□□□□ -0.8
SMG6-218ENST00000575454 CEP295Q9C0D2 2601 aa10.04□□□□□ -0.8
SMG6-218ENST00000575454 TMEM150BA6NC51 233 aa10.04□□□□□ -0.8
SMG6-218ENST00000575454 FAM170BA6NMN3 283 aa10.04□□□□□ -0.8
SMG6-218ENST00000575454 ADAMTS3O15072 1205 aa10.04□□□□□ -0.8
SMG6-218ENST00000575454 TBC1D4O60343 1298 aa10.04□□□□□ -0.8
SMG6-218ENST00000575454 XYLBO75191 536 aa10.04□□□□□ -0.8
SMG6-218ENST00000575454 TADA2AO75478 443 aa10.04□□□□□ -0.8
SMG6-218ENST00000575454 P4HBP07237 508 aaKnown RBP10.04□□□□□ -0.8
SMG6-218ENST00000575454 MLH1P40692 756 aa10.04□□□□□ -0.8
SMG6-218ENST00000575454 GPC5P78333 572 aa10.04□□□□□ -0.8
SMG6-218ENST00000575454 CSTF1Q05048 431 aaKnown RBP10.04□□□□□ -0.8
SMG6-218ENST00000575454 SNW1Q13573 536 aaKnown RBP10.04□□□□□ -0.8
SMG6-218ENST00000575454 MXD4Q14582 209 aaPredicted RBP10.04□□□□□ -0.8
SMG6-218ENST00000575454 MLF2Q15773 248 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms