RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 LMBR1Q8WVP7 490 aa15.2■□□□□ 0.02
VPS33B-208ENST00000574755 SYT17Q9BSW7 474 aa15.2■□□□□ 0.02
VPS33B-208ENST00000574755 LRRC1Q9BTT6 524 aa15.2■□□□□ 0.02
VPS33B-208ENST00000574755 TMEM8AQ9HCN3 771 aa15.2■□□□□ 0.02
VPS33B-208ENST00000574755 KCNG1Q9UIX4 513 aa15.2■□□□□ 0.02
VPS33B-208ENST00000574755 DLATP10515 647 aaKnown RBP15.2■□□□□ 0.02
VPS33B-208ENST00000574755 ABCB4P21439 1286 aa15.2■□□□□ 0.02
VPS33B-208ENST00000574755 GARTP22102 1010 aa15.2■□□□□ 0.02
VPS33B-208ENST00000574755 LIG4P49917 911 aa15.2■□□□□ 0.02
VPS33B-208ENST00000574755 STRN3Q13033 797 aa15.2■□□□□ 0.02
VPS33B-208ENST00000574755 NEDD9Q14511 834 aa15.2■□□□□ 0.02
VPS33B-208ENST00000574755 TMC2Q8TDI7 906 aa15.2■□□□□ 0.02
VPS33B-208ENST00000574755 CTNNBL1Q8WYA6 563 aaPredicted RBP15.2■□□□□ 0.02
VPS33B-208ENST00000574755 AGPAT1Q99943 283 aa15.2■□□□□ 0.02
VPS33B-208ENST00000574755 FAM213AQ9BRX8 229 aa15.2■□□□□ 0.02
VPS33B-208ENST00000574755 DHX33Q9H6R0 707 aaKnown RBP15.2■□□□□ 0.02
VPS33B-208ENST00000574755 RBM12Q9NTZ6 932 aaKnown RBP15.2■□□□□ 0.02
VPS33B-208ENST00000574755 LRRC37A2A6NM11 1700 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 IGKV6D-21A0A0A0MT36 114 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 FAM170AA1A519 330 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 KCNK3O14649 394 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 CNMDO75829 334 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 TMEM253P0C7T8 217 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 CYP24A1Q07973 514 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 PTPROQ16827 1216 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 DAAM2Q86T65 1068 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 SEMA4DQ92854 862 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 KAT5Q92993 513 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 MFSD14AQ96MC6 490 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 PORCNQ9H237 461 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 R3HDMLQ9H3Y0 253 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 TOPORSQ9NS56 1045 aaPredicted RBP15.19■□□□□ 0.02
VPS33B-208ENST00000574755 GSTTP1A0A1W2PQM5 241 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 LRRIQ4A6NIV6 560 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 KIF4AO95239 1232 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 GGPS1O95749 300 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 SLC25A27O95847 323 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 PGK2P07205 417 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 TGFB3P10600 412 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 MCCD1P59942 119 aaPredicted RBP15.19■□□□□ 0.02
VPS33B-208ENST00000574755 PPIL2Q13356 520 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 CASP8Q14790 479 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 USP50Q70EL3 339 aaPredicted RBP15.19■□□□□ 0.02
VPS33B-208ENST00000574755 PEX26Q7Z412 305 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 PALB2Q86YC2 1186 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 SYCE1Q8N0S2 351 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 FBXL13Q8NEE6 735 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 SLC20A1Q8WUM9 679 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 OPTNQ96CV9 577 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 MPHOSPH6Q99547 160 aaKnown RBP15.19■□□□□ 0.02
VPS33B-208ENST00000574755 NIFKQ9BYG3 293 aaKnown RBP15.19■□□□□ 0.02
VPS33B-208ENST00000574755 TXNRD2Q9NNW7 524 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 KCNH4Q9UQ05 1017 aa15.19■□□□□ 0.02
VPS33B-208ENST00000574755 EPHX2P34913 555 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 TCF7P36402 384 aaPredicted RBP15.18■□□□□ 0.02
VPS33B-208ENST00000574755 STAT5BP51692 787 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 MFAP3P55082 362 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 GABPB1Q06547 395 aaPredicted RBP15.18■□□□□ 0.02
VPS33B-208ENST00000574755 LY6KQ17RY6 165 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 FAM160B1Q5W0V3 765 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 C8orf74Q6P047 294 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 DEPTORQ8TB45 409 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 SLC35G2Q8TBE7 412 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 ASAP3Q8TDY4 903 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 HDAC7Q8WUI4 952 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 RFFLQ8WZ73 363 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 HINFPQ9BQA5 517 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 OSGEPQ9NPF4 335 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 TAS2R14Q9NYV8 317 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 USP20Q9Y2K6 914 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 COQ4Q9Y3A0 265 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 ZNF233A6NK53 670 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 GLRA2P23416 452 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 NAMPTP43490 491 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 RNASE9P60153 205 aaKnown RBP15.18■□□□□ 0.02
VPS33B-208ENST00000574755 MRPS25P82663 173 aaKnown RBP15.18■□□□□ 0.02
VPS33B-208ENST00000574755 GPS2Q13227 327 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 METTL7BQ6UX53 244 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 TAS1R2Q8TE23 839 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 PCYT2Q99447 389 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 UBXN6Q9BZV1 441 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 THAP2Q9H0W7 228 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 NRBP2Q9NSY0 501 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 RAB20Q9NX57 234 aa15.18■□□□□ 0.02
VPS33B-208ENST00000574755 NCANO14594 1321 aa15.17■□□□□ 0.02
VPS33B-208ENST00000574755 K7ERI5 159 aa15.17■□□□□ 0.02
VPS33B-208ENST00000574755 CES2O00748 559 aa15.17■□□□□ 0.02
VPS33B-208ENST00000574755 OAS2P29728 719 aaKnown RBP15.17■□□□□ 0.02
VPS33B-208ENST00000574755 GTF2H1P32780 548 aa15.17■□□□□ 0.02
VPS33B-208ENST00000574755 TNNT3P45378 269 aaPredicted RBP15.17■□□□□ 0.02
VPS33B-208ENST00000574755 GPC3P51654 580 aa15.17■□□□□ 0.02
VPS33B-208ENST00000574755 SLC7A5Q01650 507 aa15.17■□□□□ 0.02
VPS33B-208ENST00000574755 WDR78Q5VTH9 848 aa15.17■□□□□ 0.02
VPS33B-208ENST00000574755 SV2AQ7L0J3 742 aa15.17■□□□□ 0.02
VPS33B-208ENST00000574755 GSPT2Q8IYD1 628 aaKnown RBP15.17■□□□□ 0.02
VPS33B-208ENST00000574755 RPUSD2Q8IZ73 545 aaKnown RBP15.17■□□□□ 0.02
VPS33B-208ENST00000574755 ZC3H15Q8WU90 426 aaKnown RBP15.17■□□□□ 0.02
VPS33B-208ENST00000574755 SEPT1Q8WYJ6 367 aa15.17■□□□□ 0.02
VPS33B-208ENST00000574755 KREMEN1Q96MU8 473 aa15.17■□□□□ 0.02
VPS33B-208ENST00000574755 NT5C1BQ96P26 610 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms