RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 UBN1Q9NPG3 1134 aa28.84■■■□□ 2.21
NPLOC4-215ENST00000574095 C2orf71A6NGG8 1288 aa28.83■■■□□ 2.21
NPLOC4-215ENST00000574095 CDC25AP30304 524 aa28.83■■■□□ 2.21
NPLOC4-215ENST00000574095 KCNC3Q14003 757 aa28.83■■■□□ 2.21
NPLOC4-215ENST00000574095 CDCA2Q69YH5 1023 aaPredicted RBP28.83■■■□□ 2.21
NPLOC4-215ENST00000574095 DDX53Q86TM3 631 aaKnown RBP28.83■■■□□ 2.21
NPLOC4-215ENST00000574095 ZBTB8OSQ8IWT0 167 aa28.83■■■□□ 2.21
NPLOC4-215ENST00000574095 GAD1Q99259 594 aa28.83■■■□□ 2.21
NPLOC4-215ENST00000574095 NXF3Q9H4D5 531 aaKnown RBP28.83■■■□□ 2.21
NPLOC4-215ENST00000574095 MIOSQ9NXC5 875 aa28.83■■■□□ 2.21
NPLOC4-215ENST00000574095 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.83■■■□□ 2.21
NPLOC4-215ENST00000574095 STK24Q9Y6E0 443 aa28.83■■■□□ 2.21
NPLOC4-215ENST00000574095 A0A1B0GUA9 196 aa28.82■■■□□ 2.2
NPLOC4-215ENST00000574095 FSD2A1L4K1 749 aa28.82■■■□□ 2.2
NPLOC4-215ENST00000574095 CARNS1A5YM72 827 aa28.82■■■□□ 2.2
NPLOC4-215ENST00000574095 ARL5CA6NH57 179 aa28.82■■■□□ 2.2
NPLOC4-215ENST00000574095 C19orf67A6NJJ6 358 aa28.82■■■□□ 2.2
NPLOC4-215ENST00000574095 NPTXRO95502 500 aa28.82■■■□□ 2.2
NPLOC4-215ENST00000574095 ALDH2P05091 517 aa28.82■■■□□ 2.2
NPLOC4-215ENST00000574095 MLH1P40692 756 aa28.82■■■□□ 2.2
NPLOC4-215ENST00000574095 PRPHP41219 470 aa28.82■■■□□ 2.2
NPLOC4-215ENST00000574095 KRT79Q5XKE5 535 aa28.82■■■□□ 2.2
NPLOC4-215ENST00000574095 SLC27A1Q6PCB7 646 aa28.82■■■□□ 2.2
NPLOC4-215ENST00000574095 AUTS2Q8WXX7 1259 aa28.82■■■□□ 2.2
NPLOC4-215ENST00000574095 C1QTNF1Q9BXJ1 281 aa28.82■■■□□ 2.2
NPLOC4-215ENST00000574095 ZBP1Q9H171 429 aa28.82■■■□□ 2.2
NPLOC4-215ENST00000574095 FZD8Q9H461 694 aa28.82■■■□□ 2.2
NPLOC4-215ENST00000574095 PRMT7Q9NVM4 692 aaPredicted RBP28.82■■■□□ 2.2
NPLOC4-215ENST00000574095 E9PMD0 336 aa28.81■■■□□ 2.2
NPLOC4-215ENST00000574095 BMS1Q14692 1282 aaKnown RBP28.81■■■□□ 2.2
NPLOC4-215ENST00000574095 LARP1BQ659C4 914 aaKnown RBP28.81■■■□□ 2.2
NPLOC4-215ENST00000574095 TMEM184AQ6ZMB5 413 aa28.81■■■□□ 2.2
NPLOC4-215ENST00000574095 PPP4R3CPQ6ZMV5 832 aa28.81■■■□□ 2.2
NPLOC4-215ENST00000574095 ZFP42Q96MM3 310 aa28.81■■■□□ 2.2
NPLOC4-215ENST00000574095 TMEM175Q9BSA9 504 aa28.81■■■□□ 2.2
NPLOC4-215ENST00000574095 C2orf40Q9H1Z8 148 aa28.81■■■□□ 2.2
NPLOC4-215ENST00000574095 FAN1Q9Y2M0 1017 aa28.81■■■□□ 2.2
NPLOC4-215ENST00000574095 TDRD15B5MCY1 1934 aaKnown RBP28.81■■■□□ 2.2
NPLOC4-215ENST00000574095 TTLL13PA6NNM8 815 aa28.8■■■□□ 2.2
NPLOC4-215ENST00000574095 PI4K2BG5E9Z4 385 aa28.8■■■□□ 2.2
NPLOC4-215ENST00000574095 NRP1O14786 923 aa28.8■■■□□ 2.2
NPLOC4-215ENST00000574095 LIG1P18858 919 aa28.8■■■□□ 2.2
NPLOC4-215ENST00000574095 AKAP5P24588 427 aa28.8■■■□□ 2.2
NPLOC4-215ENST00000574095 PRIMPOLQ96LW4 560 aa28.8■■■□□ 2.2
NPLOC4-215ENST00000574095 MMTAG2Q9BU76 263 aaKnown RBP28.8■■■□□ 2.2
NPLOC4-215ENST00000574095 VN1R3Q9BXE9 311 aa28.8■■■□□ 2.2
NPLOC4-215ENST00000574095 USP20Q9Y2K6 914 aa28.8■■■□□ 2.2
NPLOC4-215ENST00000574095 USP15Q9Y4E8 981 aaPredicted RBP28.8■■■□□ 2.2
NPLOC4-215ENST00000574095 CLASP2O75122 1294 aaKnown RBP28.79■■■□□ 2.2
NPLOC4-215ENST00000574095 SRGAP2BP0DMP2 458 aa28.79■■■□□ 2.2
NPLOC4-215ENST00000574095 CTSAP10619 480 aa28.79■■■□□ 2.2
NPLOC4-215ENST00000574095 NAMPTP43490 491 aa28.79■■■□□ 2.2
NPLOC4-215ENST00000574095 SCNN1GP51170 649 aa28.79■■■□□ 2.2
NPLOC4-215ENST00000574095 ATP2C1P98194 919 aaPredicted RBP28.79■■■□□ 2.2
NPLOC4-215ENST00000574095 FAM187BQ17R55 369 aa28.79■■■□□ 2.2
NPLOC4-215ENST00000574095 ANKRD54Q6NXT1 300 aa28.79■■■□□ 2.2
NPLOC4-215ENST00000574095 HACE1Q8IYU2 909 aa28.79■■■□□ 2.2
NPLOC4-215ENST00000574095 DEPTORQ8TB45 409 aa28.79■■■□□ 2.2
NPLOC4-215ENST00000574095 APOL5Q9BWW9 433 aa28.79■■■□□ 2.2
NPLOC4-215ENST00000574095 DNM3Q9UQ16 869 aa28.79■■■□□ 2.2
NPLOC4-215ENST00000574095 GIT1Q9Y2X7 761 aa28.79■■■□□ 2.2
NPLOC4-215ENST00000574095 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.78■■■□□ 2.2
NPLOC4-215ENST00000574095 INPPL1O15357 1258 aa28.78■■■□□ 2.2
NPLOC4-215ENST00000574095 PPP2R5AQ15172 486 aa28.78■■■□□ 2.2
NPLOC4-215ENST00000574095 COLGALT2Q8IYK4 626 aa28.78■■■□□ 2.2
NPLOC4-215ENST00000574095 IFT74Q96LB3 600 aa28.78■■■□□ 2.2
NPLOC4-215ENST00000574095 KIFC3Q9BVG8 833 aa28.78■■■□□ 2.2
NPLOC4-215ENST00000574095 PARP2Q9UGN5 583 aa28.78■■■□□ 2.2
NPLOC4-215ENST00000574095 HCFC2Q9Y5Z7 792 aa28.78■■■□□ 2.2
NPLOC4-215ENST00000574095 PRKCBP05771 671 aa28.77■■■□□ 2.2
NPLOC4-215ENST00000574095 OR1G1P47890 313 aa28.77■■■□□ 2.2
NPLOC4-215ENST00000574095 PRPF4BQ13523 1007 aaKnown RBP28.77■■■□□ 2.2
NPLOC4-215ENST00000574095 ZRSR1Q15695 479 aaKnown RBP28.77■■■□□ 2.2
NPLOC4-215ENST00000574095 MAPK6Q16659 721 aa28.77■■■□□ 2.2
NPLOC4-215ENST00000574095 TMEM132AQ24JP5 1023 aa28.77■■■□□ 2.2
NPLOC4-215ENST00000574095 SYCE2Q6PIF2 218 aa28.77■■■□□ 2.2
NPLOC4-215ENST00000574095 KIFAP3Q92845 792 aa28.77■■■□□ 2.2
NPLOC4-215ENST00000574095 POP1Q99575 1024 aaKnown RBP28.77■■■□□ 2.2
NPLOC4-215ENST00000574095 CCDC113Q9H0I3 377 aa28.77■■■□□ 2.2
NPLOC4-215ENST00000574095 KLK14Q9P0G3 267 aa28.77■■■□□ 2.2
NPLOC4-215ENST00000574095 PRG3Q9Y2Y8 225 aaPredicted RBP28.77■■■□□ 2.2
NPLOC4-215ENST00000574095 EDN1P05305 212 aa28.76■■■□□ 2.19
NPLOC4-215ENST00000574095 KCNK18Q7Z418 384 aa28.76■■■□□ 2.19
NPLOC4-215ENST00000574095 TMEM87AQ8NBN3 555 aa28.76■■■□□ 2.19
NPLOC4-215ENST00000574095 GSTCDQ8NEC7 633 aa28.76■■■□□ 2.19
NPLOC4-215ENST00000574095 CASP10Q92851 521 aa28.76■■■□□ 2.19
NPLOC4-215ENST00000574095 S1PR5Q9H228 398 aa28.76■■■□□ 2.19
NPLOC4-215ENST00000574095 PDZD7Q9H5P4 517 aa28.76■■■□□ 2.19
NPLOC4-215ENST00000574095 MARCH5Q9NX47 278 aa28.76■■■□□ 2.19
NPLOC4-215ENST00000574095 IRAK3Q9Y616 596 aa28.76■■■□□ 2.19
NPLOC4-215ENST00000574095 VWA3AA6NCI4 1184 aa28.75■■■□□ 2.19
NPLOC4-215ENST00000574095 ACKR2O00590 384 aa28.75■■■□□ 2.19
NPLOC4-215ENST00000574095 N4BP3O15049 544 aa28.75■■■□□ 2.19
NPLOC4-215ENST00000574095 SSBP05455 408 aaKnown RBP eCLIP28.75■■■□□ 2.19
NPLOC4-215ENST00000574095 COL9A1P20849 921 aa28.75■■■□□ 2.19
NPLOC4-215ENST00000574095 DSC1Q08554 894 aa28.75■■■□□ 2.19
NPLOC4-215ENST00000574095 BACH2Q9BYV9 841 aa28.75■■■□□ 2.19
NPLOC4-215ENST00000574095 FAM86C2PA6NEL3 165 aa28.74■■■□□ 2.19
NPLOC4-215ENST00000574095 CUL4AQ13619 759 aa28.74■■■□□ 2.19
NPLOC4-215ENST00000574095 GIT2Q14161 759 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms