RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 EFNA5P52803 228 aa30.6■■■□□ 2.49
SCARF1-207ENST00000573867 DMP1Q13316 513 aaPredicted RBP30.6■■■□□ 2.49
SCARF1-207ENST00000573867 STK38Q15208 465 aa30.6■■■□□ 2.49
SCARF1-207ENST00000573867 THNSL1Q8IYQ7 743 aa30.6■■■□□ 2.49
SCARF1-207ENST00000573867 CNNM3Q8NE01 707 aa30.6■■■□□ 2.49
SCARF1-207ENST00000573867 RASSF8Q8NHQ8 419 aa30.6■■■□□ 2.49
SCARF1-207ENST00000573867 ZNF396Q96N95 335 aaPredicted RBP30.6■■■□□ 2.49
SCARF1-207ENST00000573867 ZNF558Q96NG5 402 aa30.6■■■□□ 2.49
SCARF1-207ENST00000573867 APOL6Q9BWW8 343 aa30.6■■■□□ 2.49
SCARF1-207ENST00000573867 NSUN3Q9H649 340 aaKnown RBP30.6■■■□□ 2.49
SCARF1-207ENST00000573867 NRDE2Q9H7Z3 1164 aa30.6■■■□□ 2.49
SCARF1-207ENST00000573867 A0A087X0B3 334 aa30.59■■■□□ 2.49
SCARF1-207ENST00000573867 PDIA4P13667 645 aaKnown RBP30.59■■■□□ 2.49
SCARF1-207ENST00000573867 BCAR1P56945 870 aa30.59■■■□□ 2.49
SCARF1-207ENST00000573867 TFF2Q03403 129 aa30.59■■■□□ 2.49
SCARF1-207ENST00000573867 ZNF280BQ86YH2 543 aa30.59■■■□□ 2.49
SCARF1-207ENST00000573867 REEP2Q9BRK0 252 aa30.59■■■□□ 2.49
SCARF1-207ENST00000573867 KMT5AQ9NQR1 393 aa30.59■■■□□ 2.49
SCARF1-207ENST00000573867 KCND2Q9NZV8 630 aa30.59■■■□□ 2.49
SCARF1-207ENST00000573867 ZDHHC9Q9Y397 364 aa30.59■■■□□ 2.49
SCARF1-207ENST00000573867 MYO7AQ13402 2215 aa30.58■■■□□ 2.49
SCARF1-207ENST00000573867 PHLPP2Q6ZVD8 1323 aa30.58■■■□□ 2.49
SCARF1-207ENST00000573867 NT5C1B-RDH14C9J2C7 533 aa30.58■■■□□ 2.49
SCARF1-207ENST00000573867 SPTLC2O15270 562 aa30.58■■■□□ 2.49
SCARF1-207ENST00000573867 SLC16A4O15374 487 aa30.58■■■□□ 2.49
SCARF1-207ENST00000573867 PLS3P13797 630 aa30.58■■■□□ 2.49
SCARF1-207ENST00000573867 TMEM173Q86WV6 379 aaPredicted RBP30.58■■■□□ 2.49
SCARF1-207ENST00000573867 SLC39A11Q8N1S5 342 aa30.58■■■□□ 2.49
SCARF1-207ENST00000573867 RSPH1Q8WYR4 309 aa30.58■■■□□ 2.49
SCARF1-207ENST00000573867 LARP4BQ92615 738 aaKnown RBP30.58■■■□□ 2.49
SCARF1-207ENST00000573867 ZFP42Q96MM3 310 aa30.58■■■□□ 2.49
SCARF1-207ENST00000573867 GAD1Q99259 594 aa30.58■■■□□ 2.49
SCARF1-207ENST00000573867 TRIM6Q9C030 488 aaPredicted RBP30.58■■■□□ 2.49
SCARF1-207ENST00000573867 C17orf75Q9HAS0 396 aa30.58■■■□□ 2.49
SCARF1-207ENST00000573867 MIOSQ9NXC5 875 aa30.58■■■□□ 2.49
SCARF1-207ENST00000573867 DNAJB4Q9UDY4 337 aa30.58■■■□□ 2.49
SCARF1-207ENST00000573867 K7ERI5 159 aa30.57■■■□□ 2.48
SCARF1-207ENST00000573867 N4BP3O15049 544 aa30.57■■■□□ 2.48
SCARF1-207ENST00000573867 INPPL1O15357 1258 aa30.57■■■□□ 2.48
SCARF1-207ENST00000573867 ZC3H11AO75152 810 aaKnown RBP eCLIP30.57■■■□□ 2.48
SCARF1-207ENST00000573867 DDHD2O94830 711 aa30.57■■■□□ 2.48
SCARF1-207ENST00000573867 YEATS4O95619 227 aa30.57■■■□□ 2.48
SCARF1-207ENST00000573867 AKAP5P24588 427 aa30.57■■■□□ 2.48
SCARF1-207ENST00000573867 MLH1P40692 756 aa30.57■■■□□ 2.48
SCARF1-207ENST00000573867 PLCB3Q01970 1234 aa30.57■■■□□ 2.48
SCARF1-207ENST00000573867 CSPP1Q1MSJ5 1256 aa30.57■■■□□ 2.48
SCARF1-207ENST00000573867 SPIRE2Q8WWL2 714 aa30.57■■■□□ 2.48
SCARF1-207ENST00000573867 NTPCRQ9BSD7 190 aaKnown RBP30.57■■■□□ 2.48
SCARF1-207ENST00000573867 TMEM134Q9H6X4 195 aa30.57■■■□□ 2.48
SCARF1-207ENST00000573867 ARL5CA6NH57 179 aa30.56■■■□□ 2.48
SCARF1-207ENST00000573867 POMCP01189 267 aa30.56■■■□□ 2.48
SCARF1-207ENST00000573867 DDIT3P35638 169 aa30.56■■■□□ 2.48
SCARF1-207ENST00000573867 ERVFC1P60507 584 aa30.56■■■□□ 2.48
SCARF1-207ENST00000573867 ADGRD2Q7Z7M1 963 aa30.56■■■□□ 2.48
SCARF1-207ENST00000573867 URGCPQ8TCY9 931 aa30.56■■■□□ 2.48
SCARF1-207ENST00000573867 BCL7CQ8WUZ0 217 aaPredicted RBP30.56■■■□□ 2.48
SCARF1-207ENST00000573867 GBP3Q9H0R5 595 aa30.56■■■□□ 2.48
SCARF1-207ENST00000573867 SPG21Q9NZD8 308 aa30.56■■■□□ 2.48
SCARF1-207ENST00000573867 DAXXQ9UER7 740 aaPredicted RBP30.56■■■□□ 2.48
SCARF1-207ENST00000573867 PPP6R2O75170 966 aa30.55■■■□□ 2.48
SCARF1-207ENST00000573867 BRD1O95696 1058 aa30.55■■■□□ 2.48
SCARF1-207ENST00000573867 GTF2F1P35269 517 aaKnown RBP eCLIP30.55■■■□□ 2.489e-7■■■■■ 27.6
SCARF1-207ENST00000573867 UBE3AQ05086 875 aa30.55■■■□□ 2.48
SCARF1-207ENST00000573867 HYAL1Q12794 435 aa30.55■■■□□ 2.48
SCARF1-207ENST00000573867 GIT2Q14161 759 aa30.55■■■□□ 2.48
SCARF1-207ENST00000573867 TMEM161BQ8NDZ6 487 aa30.55■■■□□ 2.48
SCARF1-207ENST00000573867 GSTCDQ8NEC7 633 aa30.55■■■□□ 2.48
SCARF1-207ENST00000573867 MRPS27Q92552 414 aaKnown RBP30.55■■■□□ 2.48
SCARF1-207ENST00000573867 UBN1Q9NPG3 1134 aa30.55■■■□□ 2.48
SCARF1-207ENST00000573867 ODF2LQ9ULJ1 636 aa30.55■■■□□ 2.48
SCARF1-207ENST00000573867 GALTP07902 379 aa30.54■■■□□ 2.48
SCARF1-207ENST00000573867 SLC11A1P49279 550 aa30.54■■■□□ 2.48
SCARF1-207ENST00000573867 SCNN1GP51170 649 aa30.54■■■□□ 2.48
SCARF1-207ENST00000573867 RNASELQ05823 741 aaKnown RBP30.54■■■□□ 2.48
SCARF1-207ENST00000573867 COL19A1Q14993 1142 aa30.54■■■□□ 2.48
SCARF1-207ENST00000573867 TMEM132AQ24JP5 1023 aa30.54■■■□□ 2.48
SCARF1-207ENST00000573867 ATF7IP2Q5U623 682 aa30.54■■■□□ 2.48
SCARF1-207ENST00000573867 ATXN2LQ8WWM7 1075 aaKnown RBP30.54■■■□□ 2.48
SCARF1-207ENST00000573867 HLA-CQ95604 372 aa30.54■■■□□ 2.48
SCARF1-207ENST00000573867 CHAMP1Q96JM3 812 aa30.54■■■□□ 2.48
SCARF1-207ENST00000573867 PANK2Q9BZ23 570 aa30.54■■■□□ 2.48
SCARF1-207ENST00000573867 CXCL16Q9H2A7 254 aa30.54■■■□□ 2.48
SCARF1-207ENST00000573867 KLK14Q9P0G3 267 aa30.54■■■□□ 2.48
SCARF1-207ENST00000573867 STK17AQ9UEE5 414 aa30.54■■■□□ 2.48
SCARF1-207ENST00000573867 CCDC39Q9UFE4 941 aa30.54■■■□□ 2.48
SCARF1-207ENST00000573867 GIT1Q9Y2X7 761 aa30.54■■■□□ 2.48
SCARF1-207ENST00000573867 RBM19Q9Y4C8 960 aaKnown RBP30.54■■■□□ 2.48
SCARF1-207ENST00000573867 FSCN2O14926 492 aa30.53■■■□□ 2.48
SCARF1-207ENST00000573867 PPM1AP35813 382 aa30.53■■■□□ 2.48
SCARF1-207ENST00000573867 ZNF131P52739 623 aa30.53■■■□□ 2.48
SCARF1-207ENST00000573867 DNM1Q05193 864 aaKnown RBP30.53■■■□□ 2.48
SCARF1-207ENST00000573867 RRAGBQ5VZM2 374 aa30.53■■■□□ 2.48
SCARF1-207ENST00000573867 ACO2Q99798 780 aaKnown RBP30.53■■■□□ 2.48
SCARF1-207ENST00000573867 TARS2Q9BW92 718 aaKnown RBP30.53■■■□□ 2.48
SCARF1-207ENST00000573867 UBE2ZQ9H832 354 aaPredicted RBP30.53■■■□□ 2.48
SCARF1-207ENST00000573867 TLR9Q9NR96 1032 aa30.53■■■□□ 2.48
SCARF1-207ENST00000573867 SNTG2Q9NY99 539 aa30.53■■■□□ 2.48
SCARF1-207ENST00000573867 LZTS1Q9Y250 596 aa30.53■■■□□ 2.48
SCARF1-207ENST00000573867 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP30.52■■■□□ 2.48
SCARF1-207ENST00000573867 MAPTP10636 758 aaKnown RBP30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms