RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 JAMLQ86YT9 394 aa12.1□□□□□ -0.47
RPAIN-212ENST00000573126 MYCBPAPQ8TBZ2 947 aa12.1□□□□□ -0.47
RPAIN-212ENST00000573126 SEMA4DQ92854 862 aa12.1□□□□□ -0.47
RPAIN-212ENST00000573126 KREMEN1Q96MU8 473 aa12.1□□□□□ -0.47
RPAIN-212ENST00000573126 CCT8L2Q96SF2 557 aa12.1□□□□□ -0.47
RPAIN-212ENST00000573126 TCEAL9Q9UHQ7 104 aa12.1□□□□□ -0.47
RPAIN-212ENST00000573126 DBR1Q9UK59 544 aaKnown RBP12.1□□□□□ -0.47
RPAIN-212ENST00000573126 UBIAD1Q9Y5Z9 338 aa12.1□□□□□ -0.47
RPAIN-212ENST00000573126 A0A087WUV0 522 aaPredicted RBP12.1□□□□□ -0.47
RPAIN-212ENST00000573126 TBC1D12O60347 775 aa12.1□□□□□ -0.47
RPAIN-212ENST00000573126 MMEP08473 750 aa12.1□□□□□ -0.47
RPAIN-212ENST00000573126 ADSSP30520 456 aa12.1□□□□□ -0.47
RPAIN-212ENST00000573126 SOX10P56693 466 aa12.1□□□□□ -0.47
RPAIN-212ENST00000573126 GTF2BQ00403 316 aa12.1□□□□□ -0.47
RPAIN-212ENST00000573126 IFFO1Q0D2I5 559 aa12.1□□□□□ -0.47
RPAIN-212ENST00000573126 SNRNP35Q16560 246 aaKnown RBP12.1□□□□□ -0.47
RPAIN-212ENST00000573126 XKR9Q5GH70 373 aa12.1□□□□□ -0.47
RPAIN-212ENST00000573126 DUPD1Q68J44 220 aa12.1□□□□□ -0.47
RPAIN-212ENST00000573126 ZDHHC14Q8IZN3 488 aa12.1□□□□□ -0.47
RPAIN-212ENST00000573126 FBXO25Q8TCJ0 367 aa12.1□□□□□ -0.47
RPAIN-212ENST00000573126 ZNF473Q8WTR7 871 aaKnown RBP12.1□□□□□ -0.47
RPAIN-212ENST00000573126 FAM84AQ96KN4 292 aa12.1□□□□□ -0.47
RPAIN-212ENST00000573126 PDGFDQ9GZP0 370 aaPredicted RBP12.1□□□□□ -0.47
RPAIN-212ENST00000573126 TOPORSQ9NS56 1045 aaPredicted RBP12.1□□□□□ -0.47
RPAIN-212ENST00000573126 SLC12A6Q9UHW9 1150 aa12.1□□□□□ -0.47
RPAIN-212ENST00000573126 DIS3Q9Y2L1 958 aaKnown RBP12.1□□□□□ -0.47
RPAIN-212ENST00000573126 COL4A5P29400 1685 aa12.09□□□□□ -0.47
RPAIN-212ENST00000573126 TESPA1A2RU30 521 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-212ENST00000573126 ANKRD63C9JTQ0 380 aa12.09□□□□□ -0.47
RPAIN-212ENST00000573126 WNT10BO00744 389 aa12.09□□□□□ -0.47
RPAIN-212ENST00000573126 CCNE2O96020 404 aa12.09□□□□□ -0.47
RPAIN-212ENST00000573126 CHRNB2P17787 502 aa12.09□□□□□ -0.47
RPAIN-212ENST00000573126 MAGOHP61326 146 aaKnown RBP12.09□□□□□ -0.47
RPAIN-212ENST00000573126 MKRN4PQ13434 485 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-212ENST00000573126 ALCAMQ13740 583 aa12.09□□□□□ -0.47
RPAIN-212ENST00000573126 PCNX4Q63HM2 1172 aa12.09□□□□□ -0.47
RPAIN-212ENST00000573126 UBL4BQ8N7F7 174 aa12.09□□□□□ -0.47
RPAIN-212ENST00000573126 MAGOHBQ96A72 148 aaKnown RBP12.09□□□□□ -0.47
RPAIN-212ENST00000573126 ZSWIM1Q9BR11 485 aa12.09□□□□□ -0.47
RPAIN-212ENST00000573126 DEFB129Q9H1M3 183 aa12.09□□□□□ -0.47
RPAIN-212ENST00000573126 ZDHHC18Q9NUE0 388 aa12.09□□□□□ -0.47
RPAIN-212ENST00000573126 CNOT8Q9UFF9 292 aaKnown RBP12.09□□□□□ -0.47
RPAIN-212ENST00000573126 NOCTQ9UK39 431 aaKnown RBP12.09□□□□□ -0.47
RPAIN-212ENST00000573126 TCRBV7S2A1N4TA0A589 114 aa12.09□□□□□ -0.47
RPAIN-212ENST00000573126 P4HA2O15460 535 aa12.09□□□□□ -0.47
RPAIN-212ENST00000573126 ERLIN2O94905 339 aa12.09□□□□□ -0.47
RPAIN-212ENST00000573126 SHBGP04278 402 aa12.09□□□□□ -0.47
RPAIN-212ENST00000573126 BIRC3Q13489 604 aa12.09□□□□□ -0.47
RPAIN-212ENST00000573126 C11orf63Q6NUN7 778 aa12.09□□□□□ -0.47
RPAIN-212ENST00000573126 NSMFQ6X4W1 530 aa12.09□□□□□ -0.47
RPAIN-212ENST00000573126 B4GALNT4Q76KP1 1039 aa12.09□□□□□ -0.47
RPAIN-212ENST00000573126 MCF2L2Q86YR7 1114 aa12.09□□□□□ -0.47
RPAIN-212ENST00000573126 C12orf56Q8IXR9 622 aa12.09□□□□□ -0.47
RPAIN-212ENST00000573126 FAM71AQ8IYT1 594 aa12.09□□□□□ -0.47
RPAIN-212ENST00000573126 ARFGAP2Q8N6H7 521 aa12.09□□□□□ -0.47
RPAIN-212ENST00000573126 PRELID2Q8N945 189 aa12.09□□□□□ -0.47
RPAIN-212ENST00000573126 TRPC6Q9Y210 931 aa12.09□□□□□ -0.47
RPAIN-212ENST00000573126 SYNGAP1Q96PV0 1343 aa12.08□□□□□ -0.47
RPAIN-212ENST00000573126 RTN2O75298 545 aa12.08□□□□□ -0.48
RPAIN-212ENST00000573126 PPFIA2O75334 1257 aa12.08□□□□□ -0.48
RPAIN-212ENST00000573126 CALCAP01258 141 aa12.08□□□□□ -0.48
RPAIN-212ENST00000573126 MAPTP10636 758 aaKnown RBP12.08□□□□□ -0.48
RPAIN-212ENST00000573126 RASA3Q14644 834 aa12.08□□□□□ -0.48
RPAIN-212ENST00000573126 PGM5Q15124 567 aa12.08□□□□□ -0.48
RPAIN-212ENST00000573126 TTLL6Q8N841 843 aa12.08□□□□□ -0.48
RPAIN-212ENST00000573126 DHX38Q92620 1227 aaKnown RBP12.08□□□□□ -0.48
RPAIN-212ENST00000573126 RMDN3Q96TC7 470 aa12.08□□□□□ -0.48
RPAIN-212ENST00000573126 PTPN22Q9Y2R2 807 aa12.08□□□□□ -0.48
RPAIN-212ENST00000573126 SMIM23A6NLE4 172 aa12.08□□□□□ -0.48
RPAIN-212ENST00000573126 MIF4GDA9UHW6 222 aaKnown RBP12.08□□□□□ -0.48
RPAIN-212ENST00000573126 KIAA0391O15091 583 aaKnown RBP12.08□□□□□ -0.48
RPAIN-212ENST00000573126 SPOPO43791 374 aa12.08□□□□□ -0.48
RPAIN-212ENST00000573126 FAM107AO95990 144 aa12.08□□□□□ -0.48
RPAIN-212ENST00000573126 PYGMP11217 842 aa12.08□□□□□ -0.48
RPAIN-212ENST00000573126 CNGA1P29973 690 aa12.08□□□□□ -0.48
RPAIN-212ENST00000573126 NPTX2P47972 431 aa12.08□□□□□ -0.48
RPAIN-212ENST00000573126 FMO1Q01740 532 aa12.08□□□□□ -0.48
RPAIN-212ENST00000573126 UBAP2Q5T6F2 1119 aaKnown RBP12.08□□□□□ -0.48
RPAIN-212ENST00000573126 TTC27Q6P3X3 843 aa12.08□□□□□ -0.48
RPAIN-212ENST00000573126 FAM83AQ86UY5 434 aa12.08□□□□□ -0.48
RPAIN-212ENST00000573126 ZNF564Q8TBZ8 553 aaPredicted RBP12.08□□□□□ -0.48
RPAIN-212ENST00000573126 TAS1R2Q8TE23 839 aa12.08□□□□□ -0.48
RPAIN-212ENST00000573126 NUP85Q9BW27 656 aa12.08□□□□□ -0.48
RPAIN-212ENST00000573126 TBC1D22BQ9NU19 505 aa12.08□□□□□ -0.48
RPAIN-212ENST00000573126 PFASO15067 1338 aa12.08□□□□□ -0.48
RPAIN-212ENST00000573126 DENND3A2RUS2 1198 aa12.07□□□□□ -0.48
RPAIN-212ENST00000573126 PHF2O75151 1096 aa12.07□□□□□ -0.48
RPAIN-212ENST00000573126 KIAA0754O94854 1291 aa12.07□□□□□ -0.48
RPAIN-212ENST00000573126 DLATP10515 647 aaKnown RBP12.07□□□□□ -0.48
RPAIN-212ENST00000573126 PEX5P50542 639 aa12.07□□□□□ -0.48
RPAIN-212ENST00000573126 HADHBP55084 474 aaKnown RBP12.07□□□□□ -0.48
RPAIN-212ENST00000573126 PSMC5P62195 406 aa12.07□□□□□ -0.48
RPAIN-212ENST00000573126 PPP2R2AP63151 447 aa12.07□□□□□ -0.48
RPAIN-212ENST00000573126 ANO5Q75V66 913 aa12.07□□□□□ -0.48
RPAIN-212ENST00000573126 NIPA1Q7RTP0 329 aa12.07□□□□□ -0.48
RPAIN-212ENST00000573126 C4orf19Q8IY42 314 aa12.07□□□□□ -0.48
RPAIN-212ENST00000573126 TMEM161BQ8NDZ6 487 aa12.07□□□□□ -0.48
RPAIN-212ENST00000573126 BBXQ8WY36 941 aaPredicted RBP12.07□□□□□ -0.48
RPAIN-212ENST00000573126 KAT2BQ92831 832 aa12.07□□□□□ -0.48
RPAIN-212ENST00000573126 EPB41L4BQ9H329 900 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms