RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 HNRNPLP14866 589 aaKnown RBP eCLIP5.57□□□□□ -1.52
NUP88-202ENST00000570937 KIR2DL3P43628 341 aa5.57□□□□□ -1.52
NUP88-202ENST00000570937 BPIFB4P59827 614 aa5.57□□□□□ -1.52
NUP88-202ENST00000570937 FOXL1Q12952 345 aa5.57□□□□□ -1.52
NUP88-202ENST00000570937 GRM7Q14831 915 aa5.57□□□□□ -1.52
NUP88-202ENST00000570937 ZNF585AQ6P3V2 769 aa5.57□□□□□ -1.52
NUP88-202ENST00000570937 MAMDC4Q6UXC1 1216 aa5.57□□□□□ -1.52
NUP88-202ENST00000570937 ADGRE4PQ86SQ3 457 aa5.57□□□□□ -1.52
NUP88-202ENST00000570937 LYSMD2Q8IV50 215 aa5.57□□□□□ -1.52
NUP88-202ENST00000570937 UNC5BQ8IZJ1 945 aa5.57□□□□□ -1.52
NUP88-202ENST00000570937 CLRN3Q8NCR9 226 aa5.57□□□□□ -1.52
NUP88-202ENST00000570937 GAB3Q8WWW8 586 aa5.57□□□□□ -1.52
NUP88-202ENST00000570937 GPHA2Q96T91 129 aa5.57□□□□□ -1.52
NUP88-202ENST00000570937 KRTAP9-8Q9BYQ0 159 aa5.57□□□□□ -1.52
NUP88-202ENST00000570937 C14orf93Q9H972 538 aaKnown RBP5.57□□□□□ -1.52
NUP88-202ENST00000570937 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.57□□□□□ -1.52
NUP88-202ENST00000570937 CAMSAP2Q08AD1 1489 aa5.57□□□□□ -1.52
NUP88-202ENST00000570937 CCDC141Q6ZP82 1450 aa5.57□□□□□ -1.52
NUP88-202ENST00000570937 MBD5Q9P267 1494 aa5.57□□□□□ -1.52
NUP88-202ENST00000570937 REREQ9P2R6 1566 aa5.56□□□□□ -1.52
NUP88-202ENST00000570937 MUSKO15146 869 aa5.56□□□□□ -1.52
NUP88-202ENST00000570937 NRP2O60462 931 aa5.56□□□□□ -1.52
NUP88-202ENST00000570937 TOX4O94842 621 aa5.56□□□□□ -1.52
NUP88-202ENST00000570937 JUNP05412 331 aaKnown RBP5.56□□□□□ -1.52
NUP88-202ENST00000570937 GAAP10253 952 aa5.56□□□□□ -1.52
NUP88-202ENST00000570937 CPEP16870 476 aa5.56□□□□□ -1.52
NUP88-202ENST00000570937 FAM50AQ14320 339 aaKnown RBP5.56□□□□□ -1.52
NUP88-202ENST00000570937 PDCD1Q15116 288 aa5.56□□□□□ -1.52
NUP88-202ENST00000570937 ZXDCQ2QGD7 858 aaPredicted RBP5.56□□□□□ -1.52
NUP88-202ENST00000570937 CT47A1Q5JQC4 288 aaPredicted RBP5.56□□□□□ -1.52
NUP88-202ENST00000570937 ANKRD53Q8N9V6 530 aa5.56□□□□□ -1.52
NUP88-202ENST00000570937 MPHOSPH9Q99550 1183 aa5.56□□□□□ -1.52
NUP88-202ENST00000570937 PRSS50Q9UI38 385 aa5.56□□□□□ -1.52
NUP88-202ENST00000570937 ATP7AQ04656 1500 aa5.56□□□□□ -1.52
NUP88-202ENST00000570937 DHX29Q7Z478 1369 aaKnown RBP5.55□□□□□ -1.52
NUP88-202ENST00000570937 AGLP35573 1532 aa5.55□□□□□ -1.52
NUP88-202ENST00000570937 A0A1W2PRX2 142 aa5.55□□□□□ -1.52
NUP88-202ENST00000570937 KIF3BO15066 747 aa5.55□□□□□ -1.52
NUP88-202ENST00000570937 POU3F3P20264 500 aaPredicted RBP5.55□□□□□ -1.52
NUP88-202ENST00000570937 FAPQ12884 760 aa5.55□□□□□ -1.52
NUP88-202ENST00000570937 STAT4Q14765 748 aa5.55□□□□□ -1.52
NUP88-202ENST00000570937 ACAP1Q15027 740 aa5.55□□□□□ -1.52
NUP88-202ENST00000570937 PRKD1Q15139 912 aaPredicted RBP5.55□□□□□ -1.52
NUP88-202ENST00000570937 GGT6Q6P531 493 aa5.55□□□□□ -1.52
NUP88-202ENST00000570937 HDGFL2Q7Z4V5 671 aaPredicted RBP5.55□□□□□ -1.52
NUP88-202ENST00000570937 FAM89AQ96GI7 184 aa5.55□□□□□ -1.52
NUP88-202ENST00000570937 RPL10LQ96L21 214 aaKnown RBP5.55□□□□□ -1.52
NUP88-202ENST00000570937 ACAP3Q96P50 834 aa5.55□□□□□ -1.52
NUP88-202ENST00000570937 FDXACB1Q9BRP7 624 aaPredicted RBP5.55□□□□□ -1.52
NUP88-202ENST00000570937 ANO3Q9BYT9 981 aa5.55□□□□□ -1.52
NUP88-202ENST00000570937 TOPORSQ9NS56 1045 aaPredicted RBP5.55□□□□□ -1.52
NUP88-202ENST00000570937 USP18Q9UMW8 372 aa5.55□□□□□ -1.52
NUP88-202ENST00000570937 A2MP01023 1474 aa5.55□□□□□ -1.52
NUP88-202ENST00000570937 PTPRMP28827 1452 aa5.55□□□□□ -1.52
NUP88-202ENST00000570937 FGD6Q6ZV73 1430 aa5.55□□□□□ -1.52
NUP88-202ENST00000570937 CNTLNQ9NXG0 1405 aa5.55□□□□□ -1.52
NUP88-202ENST00000570937 ARHGEF5Q12774 1597 aa5.55□□□□□ -1.52
NUP88-202ENST00000570937 DIP2CQ9Y2E4 1556 aa5.55□□□□□ -1.52
NUP88-202ENST00000570937 BCORL1Q5H9F3 1711 aa5.54□□□□□ -1.52
NUP88-202ENST00000570937 ADAMTSL3P82987 1691 aa5.54□□□□□ -1.52
NUP88-202ENST00000570937 INSRRP14616 1297 aa5.54□□□□□ -1.52
NUP88-202ENST00000570937 ACO1P21399 889 aaKnown RBP5.54□□□□□ -1.52
NUP88-202ENST00000570937 XPAP23025 273 aaPredicted RBP5.54□□□□□ -1.52
NUP88-202ENST00000570937 MSX2P35548 267 aaPredicted RBP5.54□□□□□ -1.52
NUP88-202ENST00000570937 CD69Q07108 199 aa5.54□□□□□ -1.52
NUP88-202ENST00000570937 TRIM25Q14258 630 aaKnown RBP5.54□□□□□ -1.52
NUP88-202ENST00000570937 FSCN1Q16658 493 aaKnown RBP5.54□□□□□ -1.52
NUP88-202ENST00000570937 PITRM1Q5JRX3 1037 aa5.54□□□□□ -1.52
NUP88-202ENST00000570937 GGNQ86UU5 652 aa5.54□□□□□ -1.52
NUP88-202ENST00000570937 PIK3C3Q8NEB9 887 aa5.54□□□□□ -1.52
NUP88-202ENST00000570937 OR14C36Q8NHC7 312 aa5.54□□□□□ -1.52
NUP88-202ENST00000570937 UIMC1Q96RL1 719 aa5.54□□□□□ -1.52
NUP88-202ENST00000570937 ADOQ96SZ5 270 aa5.54□□□□□ -1.52
NUP88-202ENST00000570937 IL23AQ9NPF7 189 aa5.54□□□□□ -1.52
NUP88-202ENST00000570937 KIDINS220Q9ULH0 1771 aa5.54□□□□□ -1.52
NUP88-202ENST00000570937 ANKRD30AQ9BXX3 1397 aa5.54□□□□□ -1.52
NUP88-202ENST00000570937 WASHC2CQ9Y4E1 1318 aa5.53□□□□□ -1.52
NUP88-202ENST00000570937 ABCA6Q8N139 1617 aa5.53□□□□□ -1.52
NUP88-202ENST00000570937 A0A1W2PR48 441 aa5.53□□□□□ -1.52
NUP88-202ENST00000570937 GOLGA8BA8MQT2 603 aa5.53□□□□□ -1.52
NUP88-202ENST00000570937 GPR39O43194 453 aa5.53□□□□□ -1.52
NUP88-202ENST00000570937 LY86O95711 162 aa5.53□□□□□ -1.52
NUP88-202ENST00000570937 CLEC2LP0C7M8 214 aa5.53□□□□□ -1.52
NUP88-202ENST00000570937 CNGA1P29973 690 aa5.53□□□□□ -1.52
NUP88-202ENST00000570937 NRG3P56975 720 aa5.53□□□□□ -1.52
NUP88-202ENST00000570937 CCDC62Q6P9F0 684 aa5.53□□□□□ -1.52
NUP88-202ENST00000570937 GAREM2Q75VX8 874 aa5.53□□□□□ -1.52
NUP88-202ENST00000570937 TAS1R1Q7RTX1 841 aa5.53□□□□□ -1.52
NUP88-202ENST00000570937 PALM2Q8IXS6 379 aa5.53□□□□□ -1.52
NUP88-202ENST00000570937 CMTM4Q8IZR5 234 aa5.53□□□□□ -1.52
NUP88-202ENST00000570937 ORAI2Q96SN7 254 aa5.53□□□□□ -1.52
NUP88-202ENST00000570937 PRDM12Q9H4Q4 367 aa5.53□□□□□ -1.52
NUP88-202ENST00000570937 SPC25Q9HBM1 224 aa5.53□□□□□ -1.52
NUP88-202ENST00000570937 RRP7BPQ9NSQ0 103 aa5.53□□□□□ -1.52
NUP88-202ENST00000570937 EVLQ9UI08 416 aaPredicted RBP5.53□□□□□ -1.52
NUP88-202ENST00000570937 INO80Q9ULG1 1556 aaPredicted RBP5.53□□□□□ -1.52
NUP88-202ENST00000570937 SBNO2Q9Y2G9 1366 aa5.53□□□□□ -1.52
NUP88-202ENST00000570937 MADDQ8WXG6 1647 aa5.52□□□□□ -1.53
NUP88-202ENST00000570937 PTPN23Q9H3S7 1636 aa5.52□□□□□ -1.53
NUP88-202ENST00000570937 SHANK2Q9UPX8 1470 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms