RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 PNMA6FA0A0J9YX94 578 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 DPPA5A6NC42 116 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 NPTXRO95502 500 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 ECEL1O95672 775 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 EYA4O95677 639 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 LDHCP07864 332 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 CASP4P49662 377 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 SGSM1Q2NKQ1 1148 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 ANO7Q6IWH7 933 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 FAM196AQ6ZSG2 479 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 ERMNQ8TAM6 284 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 TMEM237Q96Q45 408 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 REEP2Q9BRK0 252 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 PITPNM3Q9BZ71 974 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 WHRNQ9P202 907 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 CREB1P16220 341 aa16.53■□□□□ 0.24
SMG6-207ENST00000570756 RASSF2P50749 326 aa16.53■□□□□ 0.24
SMG6-207ENST00000570756 RPS8P62241 208 aaKnown RBP16.53■□□□□ 0.24
SMG6-207ENST00000570756 ROR2Q01974 943 aaKnown RBP16.53■□□□□ 0.24
SMG6-207ENST00000570756 MGAT5Q09328 741 aa16.53■□□□□ 0.24
SMG6-207ENST00000570756 TCEAL1Q15170 157 aa16.53■□□□□ 0.24
SMG6-207ENST00000570756 POTEGQ6S5H5 508 aa16.53■□□□□ 0.24
SMG6-207ENST00000570756 SMIM5Q71RC9 77 aa16.53■□□□□ 0.24
SMG6-207ENST00000570756 SLFN12Q8IYM2 578 aa16.53■□□□□ 0.24
SMG6-207ENST00000570756 KRT35Q92764 455 aa16.53■□□□□ 0.24
SMG6-207ENST00000570756 UTP4Q969X6 686 aaKnown RBP16.53■□□□□ 0.24
SMG6-207ENST00000570756 DDX23Q9BUQ8 820 aaKnown RBP16.53■□□□□ 0.24
SMG6-207ENST00000570756 WNT8AQ9H1J5 351 aa16.53■□□□□ 0.24
SMG6-207ENST00000570756 NKX1-2Q9UD57 310 aaPredicted RBP16.53■□□□□ 0.24
SMG6-207ENST00000570756 DNM3Q9UQ16 869 aa16.53■□□□□ 0.24
SMG6-207ENST00000570756 PEX11AO75192 247 aa16.53■□□□□ 0.24
SMG6-207ENST00000570756 MED24O75448 989 aa16.53■□□□□ 0.24
SMG6-207ENST00000570756 ACADSP16219 412 aa16.53■□□□□ 0.24
SMG6-207ENST00000570756 CNGA1P29973 690 aa16.53■□□□□ 0.24
SMG6-207ENST00000570756 PSMC2P35998 433 aaKnown RBP16.53■□□□□ 0.24
SMG6-207ENST00000570756 NOVP48745 357 aa16.53■□□□□ 0.24
SMG6-207ENST00000570756 POLGP54098 1239 aaPredicted RBP16.53■□□□□ 0.24
SMG6-207ENST00000570756 IL9RQ01113 521 aa16.53■□□□□ 0.24
SMG6-207ENST00000570756 TRAF1Q13077 416 aa16.53■□□□□ 0.24
SMG6-207ENST00000570756 MIGA2Q7L4E1 593 aa16.53■□□□□ 0.24
SMG6-207ENST00000570756 APBB1IPQ7Z5R6 666 aaPredicted RBP16.53■□□□□ 0.24
SMG6-207ENST00000570756 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.53■□□□□ 0.24
SMG6-207ENST00000570756 FAM186BQ8IYM0 893 aa16.53■□□□□ 0.24
SMG6-207ENST00000570756 ENDOVQ8N8Q3 282 aaKnown RBP16.53■□□□□ 0.24
SMG6-207ENST00000570756 FRMPD4Q14CM0 1322 aa16.52■□□□□ 0.24
SMG6-207ENST00000570756 ADGRA3Q8IWK6 1321 aa16.52■□□□□ 0.24
SMG6-207ENST00000570756 ANKRD63C9JTQ0 380 aa16.52■□□□□ 0.24
SMG6-207ENST00000570756 HGSO14964 777 aaPredicted RBP16.52■□□□□ 0.24
SMG6-207ENST00000570756 TCEA3O75764 348 aa16.52■□□□□ 0.24
SMG6-207ENST00000570756 GH1P01241 217 aa16.52■□□□□ 0.24
SMG6-207ENST00000570756 TPBGLP0DKB5 382 aa16.52■□□□□ 0.24
SMG6-207ENST00000570756 KLC1Q07866 573 aa16.52■□□□□ 0.24
SMG6-207ENST00000570756 CWF19L1Q69YN2 538 aaKnown RBP16.52■□□□□ 0.24
SMG6-207ENST00000570756 CGB2Q6NT52 195 aa16.52■□□□□ 0.24
SMG6-207ENST00000570756 SLC13A5Q86YT5 568 aaPredicted RBP16.52■□□□□ 0.24
SMG6-207ENST00000570756 SYT2Q8N9I0 419 aaPredicted RBP16.52■□□□□ 0.24
SMG6-207ENST00000570756 C12orf50Q8NA57 414 aaPredicted RBP16.52■□□□□ 0.24
SMG6-207ENST00000570756 SH3TC2Q8TF17 1288 aa16.52■□□□□ 0.24
SMG6-207ENST00000570756 NUDCD1Q96RS6 583 aa16.52■□□□□ 0.24
SMG6-207ENST00000570756 TAS2R14Q9NYV8 317 aa16.52■□□□□ 0.24
SMG6-207ENST00000570756 RPL26L1Q9UNX3 145 aaKnown RBP16.52■□□□□ 0.24
SMG6-207ENST00000570756 NHSQ6T4R5 1651 aa16.52■□□□□ 0.23
SMG6-207ENST00000570756 TBCAO75347 108 aaKnown RBP16.51■□□□□ 0.23
SMG6-207ENST00000570756 AP1G2O75843 785 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 GCNT3O95395 438 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 TTC4O95801 387 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 RFX1P22670 979 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 FMO5P49326 533 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 RAB27AP51159 221 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 ITPK1Q13572 414 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 WASHC2DQ5SRD0 308 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 BORCS6Q96GS4 357 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 LRRC37BQ96QE4 947 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 MYLK2Q9H1R3 596 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 ACTL7BQ9Y614 415 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 LOC102724428A0A0B4J2F2 783 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 TMEM110-MUSTN1A8MSY1 372 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 CLIC2O15247 247 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 MAPK13O15264 365 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 DCTN3O75935 186 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 LMNAP02545 664 aaKnown RBP16.51■□□□□ 0.23
SMG6-207ENST00000570756 GNAT1P11488 350 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 ITIH2P19823 946 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 ALDH3A1P30838 453 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 RFC4P35249 363 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 MARCKSL1P49006 195 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 PEX5P50542 639 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 YARSP54577 528 aaKnown RBP16.51■□□□□ 0.23
SMG6-207ENST00000570756 SIK1P57059 783 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 KIF22Q14807 665 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 GNPTABQ3T906 1256 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 CLEC4GQ6UXB4 293 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 ZDHHC14Q8IZN3 488 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 ANKLE1Q8NAG6 615 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 C7orf43Q8WVR3 580 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 ERP27Q96DN0 273 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 AGPAT1Q99943 283 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 VCXQ9H320 206 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 PSTPIP2Q9H939 334 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 APEX2Q9UBZ4 518 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms