RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 MRPL10Q7Z7H8 261 aaKnown RBP13.49□□□□□ -0.25
CAPN3-220ENST00000569827 PPFIBP1Q86W92 1011 aa13.49□□□□□ -0.25
CAPN3-220ENST00000569827 POTEDQ86YR6 584 aa13.49□□□□□ -0.25
CAPN3-220ENST00000569827 RNF149Q8NC42 400 aa13.49□□□□□ -0.25
CAPN3-220ENST00000569827 OXER1Q8TDS5 423 aa13.49□□□□□ -0.25
CAPN3-220ENST00000569827 NKD2Q969F2 451 aaPredicted RBP13.49□□□□□ -0.25
CAPN3-220ENST00000569827 DYDC2Q96IM9 177 aa13.49□□□□□ -0.25
CAPN3-220ENST00000569827 MYADMQ96S97 322 aa13.49□□□□□ -0.25
CAPN3-220ENST00000569827 LXNQ9BS40 222 aa13.49□□□□□ -0.25
CAPN3-220ENST00000569827 MRPL17Q9NRX2 175 aaKnown RBP13.49□□□□□ -0.25
CAPN3-220ENST00000569827 IPPQ9Y573 584 aa13.49□□□□□ -0.25
CAPN3-220ENST00000569827 SPTBN2O15020 2390 aa13.48□□□□□ -0.25
CAPN3-220ENST00000569827 A0A087WWV3 80 aa13.48□□□□□ -0.25
CAPN3-220ENST00000569827 CCDC195A0A1B0GUA6 201 aa13.48□□□□□ -0.25
CAPN3-220ENST00000569827 KRBA1A5PL33 1030 aa13.48□□□□□ -0.25
CAPN3-220ENST00000569827 STK25O00506 426 aa13.48□□□□□ -0.25
CAPN3-220ENST00000569827 DEXIO95424 95 aa13.48□□□□□ -0.25
CAPN3-220ENST00000569827 SOD2P04179 222 aa13.48□□□□□ -0.25
CAPN3-220ENST00000569827 ALDH2P05091 517 aa13.48□□□□□ -0.25
CAPN3-220ENST00000569827 RPL17P18621 184 aaKnown RBP13.48□□□□□ -0.25
CAPN3-220ENST00000569827 AOC1P19801 751 aa13.48□□□□□ -0.25
CAPN3-220ENST00000569827 CLCN5P51795 746 aa13.48□□□□□ -0.25
CAPN3-220ENST00000569827 CDC42EP1Q00587 391 aa13.48□□□□□ -0.25
CAPN3-220ENST00000569827 PPP2R5CQ13362 524 aa13.48□□□□□ -0.25
CAPN3-220ENST00000569827 ANGPT1Q15389 498 aa13.48□□□□□ -0.25
CAPN3-220ENST00000569827 XKR9Q5GH70 373 aa13.48□□□□□ -0.25
CAPN3-220ENST00000569827 EARS2Q5JPH6 523 aaKnown RBP13.48□□□□□ -0.25
CAPN3-220ENST00000569827 RUFY3Q7L099 469 aa13.48□□□□□ -0.25
CAPN3-220ENST00000569827 PALB2Q86YC2 1186 aa13.48□□□□□ -0.25
CAPN3-220ENST00000569827 COLGALT2Q8IYK4 626 aa13.48□□□□□ -0.25
CAPN3-220ENST00000569827 ADSSL1Q8N142 457 aa13.48□□□□□ -0.25
CAPN3-220ENST00000569827 FBXL16Q8N461 479 aa13.48□□□□□ -0.25
CAPN3-220ENST00000569827 DAGLBQ8NCG7 672 aa13.48□□□□□ -0.25
CAPN3-220ENST00000569827 PSPC1Q8WXF1 523 aaKnown RBP13.48□□□□□ -0.25
CAPN3-220ENST00000569827 SLC7A3Q8WY07 619 aa13.48□□□□□ -0.25
CAPN3-220ENST00000569827 RIN2Q8WYP3 895 aaPredicted RBP13.48□□□□□ -0.25
CAPN3-220ENST00000569827 TMEM175Q9BSA9 504 aa13.48□□□□□ -0.25
CAPN3-220ENST00000569827 HERC2P3Q9BVR0 1158 aa13.48□□□□□ -0.25
CAPN3-220ENST00000569827 DHX33Q9H6R0 707 aaKnown RBP13.48□□□□□ -0.25
CAPN3-220ENST00000569827 KCNMB3Q9NPA1 279 aa13.48□□□□□ -0.25
CAPN3-220ENST00000569827 CACNA1AO00555 2505 aa13.48□□□□□ -0.25
CAPN3-220ENST00000569827 CLUHO75153 1309 aa13.47□□□□□ -0.25
CAPN3-220ENST00000569827 ARL5CA6NH57 179 aa13.47□□□□□ -0.25
CAPN3-220ENST00000569827 CCNT1O60563 726 aaKnown RBP13.47□□□□□ -0.25
CAPN3-220ENST00000569827 TSPAN1O60635 241 aa13.47□□□□□ -0.25
CAPN3-220ENST00000569827 ERLIN2O94905 339 aa13.47□□□□□ -0.25
CAPN3-220ENST00000569827 GLUD1P00367 558 aa13.47□□□□□ -0.25
CAPN3-220ENST00000569827 ITGA4P13612 1032 aa13.47□□□□□ -0.25
CAPN3-220ENST00000569827 NCLP19338 710 aaKnown RBP13.47□□□□□ -0.25
CAPN3-220ENST00000569827 PSMA5P28066 241 aa13.47□□□□□ -0.25
CAPN3-220ENST00000569827 YWHABP31946 246 aaKnown RBP13.47□□□□□ -0.25
CAPN3-220ENST00000569827 NUBP1P53384 320 aa13.47□□□□□ -0.25
CAPN3-220ENST00000569827 EVCP57679 992 aa13.47□□□□□ -0.25
CAPN3-220ENST00000569827 SPECC1Q5M775 1068 aa13.47□□□□□ -0.25
CAPN3-220ENST00000569827 POTEGQ6S5H5 508 aa13.47□□□□□ -0.25
CAPN3-220ENST00000569827 MOXD1Q6UVY6 613 aa13.47□□□□□ -0.25
CAPN3-220ENST00000569827 PIK3AP1Q6ZUJ8 805 aa13.47□□□□□ -0.25
CAPN3-220ENST00000569827 GET4Q7L5D6 327 aaPredicted RBP13.47□□□□□ -0.25
CAPN3-220ENST00000569827 KRT25Q7Z3Z0 450 aa13.47□□□□□ -0.25
CAPN3-220ENST00000569827 SRGAP1Q7Z6B7 1085 aa13.47□□□□□ -0.25
CAPN3-220ENST00000569827 FERMT3Q86UX7 667 aa13.47□□□□□ -0.25
CAPN3-220ENST00000569827 CCDC105Q8IYK2 499 aa13.47□□□□□ -0.25
CAPN3-220ENST00000569827 DTWD2Q8NBA8 298 aa13.47□□□□□ -0.25
CAPN3-220ENST00000569827 SMG7Q92540 1137 aaKnown RBP13.47□□□□□ -0.25
CAPN3-220ENST00000569827 HAS1Q92839 578 aa13.47□□□□□ -0.25
CAPN3-220ENST00000569827 RPS6KC1Q96S38 1066 aa13.47□□□□□ -0.25
CAPN3-220ENST00000569827 C22orf23Q9BZE7 217 aa13.47□□□□□ -0.25
CAPN3-220ENST00000569827 NXF3Q9H4D5 531 aaKnown RBP13.47□□□□□ -0.25
CAPN3-220ENST00000569827 XPNPEP1Q9NQW7 623 aa13.47□□□□□ -0.25
CAPN3-220ENST00000569827 KLK14Q9P0G3 267 aa13.47□□□□□ -0.25
CAPN3-220ENST00000569827 CNTNAP2Q9UHC6 1331 aa13.46□□□□□ -0.25
CAPN3-220ENST00000569827 CCDC194A0A1B0GVG4 234 aa13.46□□□□□ -0.25
CAPN3-220ENST00000569827 INO80B-WBP1J3KQ70 363 aa13.46□□□□□ -0.25
CAPN3-220ENST00000569827 B4GALT5O43286 388 aa13.46□□□□□ -0.25
CAPN3-220ENST00000569827 P4HBP07237 508 aaKnown RBP13.46□□□□□ -0.25
CAPN3-220ENST00000569827 AKAP5P24588 427 aa13.46□□□□□ -0.25
CAPN3-220ENST00000569827 GLUD2P49448 558 aa13.46□□□□□ -0.25
CAPN3-220ENST00000569827 FOSBP53539 338 aa13.46□□□□□ -0.25
CAPN3-220ENST00000569827 NEK8Q86SG6 692 aa13.46□□□□□ -0.25
CAPN3-220ENST00000569827 ASAP3Q8TDY4 903 aa13.46□□□□□ -0.25
CAPN3-220ENST00000569827 HASPINQ8TF76 798 aa13.46□□□□□ -0.25
CAPN3-220ENST00000569827 ZNF707Q96C28 371 aaPredicted RBP13.46□□□□□ -0.25
CAPN3-220ENST00000569827 JPH2Q9BR39 696 aaPredicted RBP13.46□□□□□ -0.25
CAPN3-220ENST00000569827 GPR62Q9BZJ7 368 aa13.46□□□□□ -0.25
CAPN3-220ENST00000569827 ZSWIM6Q9HCJ5 1215 aa13.46□□□□□ -0.25
CAPN3-220ENST00000569827 R4GN57 208 aa13.46□□□□□ -0.25
CAPN3-220ENST00000569827 GPR179Q6PRD1 2367 aa13.46□□□□□ -0.25
CAPN3-220ENST00000569827 CITO14578 2027 aa13.46□□□□□ -0.26
CAPN3-220ENST00000569827 MARCH6O60337 910 aa13.45□□□□□ -0.26
CAPN3-220ENST00000569827 ADH1AP07327 375 aa13.45□□□□□ -0.26
CAPN3-220ENST00000569827 DCNP07585 359 aaKnown RBP13.45□□□□□ -0.26
CAPN3-220ENST00000569827 RFX1P22670 979 aa13.45□□□□□ -0.26
CAPN3-220ENST00000569827 RFC5P40937 340 aa13.45□□□□□ -0.26
CAPN3-220ENST00000569827 SPIRE1Q08AE8 756 aa13.45□□□□□ -0.26
CAPN3-220ENST00000569827 SCRN1Q12765 414 aa13.45□□□□□ -0.26
CAPN3-220ENST00000569827 KIAA0319Q5VV43 1072 aa13.45□□□□□ -0.26
CAPN3-220ENST00000569827 PRSS55Q6UWB4 352 aaPredicted RBP13.45□□□□□ -0.26
CAPN3-220ENST00000569827 C15orf39Q6ZRI6 1047 aa13.45□□□□□ -0.26
CAPN3-220ENST00000569827 TPH2Q8IWU9 490 aa13.45□□□□□ -0.26
CAPN3-220ENST00000569827 RNF168Q8IYW5 571 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms