RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 GTPBP10A4D1E9 387 aaKnown RBP11.9□□□□□ -0.5
PDXDC1-216ENST00000569715 MAPK13O15264 365 aa11.9□□□□□ -0.5
PDXDC1-216ENST00000569715 CSDE1O75534 798 aaKnown RBP11.9□□□□□ -0.5
PDXDC1-216ENST00000569715 VTNP04004 478 aa11.9□□□□□ -0.5
PDXDC1-216ENST00000569715 UCHL3P15374 230 aa11.9□□□□□ -0.5
PDXDC1-216ENST00000569715 NLRP11P59045 1033 aaKnown RBP11.9□□□□□ -0.5
PDXDC1-216ENST00000569715 IRF5Q13568 498 aa11.9□□□□□ -0.5
PDXDC1-216ENST00000569715 MTHFD1LQ6UB35 978 aa11.9□□□□□ -0.5
PDXDC1-216ENST00000569715 GPD1LQ8N335 351 aa11.9□□□□□ -0.5
PDXDC1-216ENST00000569715 JPH2Q9BR39 696 aaPredicted RBP11.9□□□□□ -0.5
PDXDC1-216ENST00000569715 PLCB1Q9NQ66 1216 aa11.9□□□□□ -0.5
PDXDC1-216ENST00000569715 ARHGAP20Q9P2F6 1191 aa11.9□□□□□ -0.5
PDXDC1-216ENST00000569715 REXO2Q9Y3B8 237 aaKnown RBP11.9□□□□□ -0.5
PDXDC1-216ENST00000569715 STYXL1Q9Y6J8 313 aa11.9□□□□□ -0.5
PDXDC1-216ENST00000569715 F2P00734 622 aa11.9□□□□□ -0.5
PDXDC1-216ENST00000569715 IQCF3P0C7M6 154 aa11.9□□□□□ -0.5
PDXDC1-216ENST00000569715 HNRNPH3P31942 346 aaKnown RBP11.9□□□□□ -0.5
PDXDC1-216ENST00000569715 ACOT2P49753 483 aa11.9□□□□□ -0.5
PDXDC1-216ENST00000569715 TSR1Q2NL82 804 aaKnown RBP11.9□□□□□ -0.5
PDXDC1-216ENST00000569715 SEZ6Q53EL9 994 aa11.9□□□□□ -0.5
PDXDC1-216ENST00000569715 EXOC8Q8IYI6 725 aa11.9□□□□□ -0.5
PDXDC1-216ENST00000569715 SETD4Q9NVD3 440 aa11.9□□□□□ -0.5
PDXDC1-216ENST00000569715 COL1A2P08123 1366 aa11.9□□□□□ -0.5
PDXDC1-216ENST00000569715 CASP8AP2Q9UKL3 1982 aa11.9□□□□□ -0.51
PDXDC1-216ENST00000569715 MYADML2A6NDP7 307 aa11.9□□□□□ -0.51
PDXDC1-216ENST00000569715 LRRIQ3A6PVS8 624 aaPredicted RBP11.9□□□□□ -0.51
PDXDC1-216ENST00000569715 PRKCBP05771 671 aa11.9□□□□□ -0.51
PDXDC1-216ENST00000569715 HARSP12081 509 aaKnown RBP11.9□□□□□ -0.51
PDXDC1-216ENST00000569715 TNNT1P13805 278 aa11.9□□□□□ -0.51
PDXDC1-216ENST00000569715 APLP1P51693 650 aa11.9□□□□□ -0.51
PDXDC1-216ENST00000569715 CYP24A1Q07973 514 aa11.9□□□□□ -0.51
PDXDC1-216ENST00000569715 NHEJ1Q9H9Q4 299 aaPredicted RBP11.9□□□□□ -0.51
PDXDC1-216ENST00000569715 B4GALT5O43286 388 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 NDUFA10O95299 355 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 ABL1P00519 1130 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 PNMA6AP0CW24 399 aaPredicted RBP11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 CYBAP13498 195 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 ABCD1P33897 745 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 HIC1Q14526 733 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 KIAA0753Q2KHM9 967 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 CRELD2Q6UXH1 353 aaPredicted RBP11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 PARD3BQ8TEW8 1205 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 LMBR1Q8WVP7 490 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 MFSD14AQ96MC6 490 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 INTS2Q9H0H0 1204 aaKnown RBP11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 ZNHIT6Q9NWK9 470 aaKnown RBP11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 AGO2Q9UKV8 859 aaKnown RBP11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 TRPA1O75762 1119 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 CCDC175P0C221 793 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 EFNA5P52803 228 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 RAPGEF1Q13905 1077 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 PTPN14Q15678 1187 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 GLIPR1L2Q4G1C9 344 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 HGSNATQ68CP4 663 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 IQCEQ6IPM2 695 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 ZBTB8OSQ8IWT0 167 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 LMO3Q8TAP4 145 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 EDEM3Q9BZQ6 932 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 TMEM117Q9H0C3 514 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 IFT122Q9HBG6 1241 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.89□□□□□ -0.513e-8■■■■■ 123.5
PDXDC1-216ENST00000569715 TFR2Q9UP52 801 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 AKT3Q9Y243 479 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 EPN1Q9Y6I3 576 aaPredicted RBP11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 INO80B-WBP1J3KQ70 363 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 EXTL3O43909 919 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 SMIM10L2AP0DMW4 78 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 SMIM10L2BP0DMW5 78 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 MATR3P43243 847 aaKnown RBP eCLIP11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 MBTD1Q05BQ5 628 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 LMBRD2Q68DH5 695 aaPredicted RBP11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 CDR2LQ86X02 465 aaPredicted RBP11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 MSTO1Q9BUK6 570 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 INO80BQ9C086 356 aaPredicted RBP11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 RNF186Q9NXI6 227 aa11.89□□□□□ -0.51
PDXDC1-216ENST00000569715 A0A087WZ62 844 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 A0A0B4J269 797 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 MAGEB2O15479 319 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 ZSCAN12O43309 604 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 MYL3P08590 195 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 DLATP10515 647 aaKnown RBP11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 PTENP60484 403 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 SP3Q02447 781 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 MAP2K1Q02750 393 aaPredicted RBP11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 ARID5AQ03989 594 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 ZBTB33Q86T24 672 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 ELMO3Q96BJ8 720 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 FDXACB1Q9BRP7 624 aaPredicted RBP11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 ABLIM1O14639 778 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 AKR1A1P14550 325 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 SCP2P22307 547 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 MXI1P50539 228 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 MCCD1P59942 119 aaPredicted RBP11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 TFDP1Q14186 410 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 MFSD10Q14728 455 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 ENOX2Q16206 610 aaKnown RBP11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 MAPK6Q16659 721 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 EPC2Q52LR7 807 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 ACO2Q99798 780 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms