RNA–Protein interactions for RNA: ENST00000569627.1

KATNB1-210, Transcript of katanin regulatory subunit B1, humanhuman

TSL 3

Gene KATNB1, Length 622 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-210ENST00000569627 ME1P48163 572 aa13.42□□□□□ -0.26
KATNB1-210ENST00000569627 SLC12A3P55017 1021 aa13.42□□□□□ -0.26
KATNB1-210ENST00000569627 GRIN1Q05586 938 aa13.42□□□□□ -0.26
KATNB1-210ENST00000569627 DCAF4L1Q3SXM0 396 aa13.42□□□□□ -0.26
KATNB1-210ENST00000569627 KCNT2Q6UVM3 1135 aa13.42□□□□□ -0.26
KATNB1-210ENST00000569627 EP400NLQ6ZTU2 488 aa13.42□□□□□ -0.26
KATNB1-210ENST00000569627 KCNK18Q7Z418 384 aa13.42□□□□□ -0.26
KATNB1-210ENST00000569627 MRPL10Q7Z7H8 261 aaKnown RBP13.42□□□□□ -0.26
KATNB1-210ENST00000569627 MYCT1Q8N699 235 aa13.42□□□□□ -0.26
KATNB1-210ENST00000569627 TMEM87AQ8NBN3 555 aa13.42□□□□□ -0.26
KATNB1-210ENST00000569627 LINC00301Q8NCQ3 95 aa13.42□□□□□ -0.26
KATNB1-210ENST00000569627 BSNDQ8WZ55 320 aa13.42□□□□□ -0.26
KATNB1-210ENST00000569627 TMEM169Q96HH4 297 aa13.42□□□□□ -0.26
KATNB1-210ENST00000569627 EPSTI1Q96J88 318 aa13.42□□□□□ -0.26
KATNB1-210ENST00000569627 CLIC6Q96NY7 704 aa13.42□□□□□ -0.26
KATNB1-210ENST00000569627 TCHPQ9BT92 498 aa13.42□□□□□ -0.26
KATNB1-210ENST00000569627 MRPL4Q9BYD3 311 aaKnown RBP13.42□□□□□ -0.26
KATNB1-210ENST00000569627 GBP3Q9H0R5 595 aa13.42□□□□□ -0.26
KATNB1-210ENST00000569627 FZD8Q9H461 694 aa13.42□□□□□ -0.26
KATNB1-210ENST00000569627 TMEM134Q9H6X4 195 aa13.42□□□□□ -0.26
KATNB1-210ENST00000569627 PARVGQ9HBI0 331 aa13.42□□□□□ -0.26
KATNB1-210ENST00000569627 POLD4Q9HCU8 107 aa13.42□□□□□ -0.26
KATNB1-210ENST00000569627 ALG13Q9NP73 1137 aaKnown RBP13.42□□□□□ -0.26
KATNB1-210ENST00000569627 FAM13BQ9NYF5 915 aa13.42□□□□□ -0.26
KATNB1-210ENST00000569627 SPG21Q9NZD8 308 aa13.42□□□□□ -0.26
KATNB1-210ENST00000569627 COG5Q9UP83 839 aa13.42□□□□□ -0.26
KATNB1-210ENST00000569627 PLAGL2Q9UPG8 496 aa13.42□□□□□ -0.26
KATNB1-210ENST00000569627 GIT1Q9Y2X7 761 aa13.42□□□□□ -0.26
KATNB1-210ENST00000569627 FSD2A1L4K1 749 aa13.41□□□□□ -0.26
KATNB1-210ENST00000569627 SFI1A8K8P3 1242 aa13.41□□□□□ -0.26
KATNB1-210ENST00000569627 B4GALT5O43286 388 aa13.41□□□□□ -0.26
KATNB1-210ENST00000569627 CUTAO60888 179 aa13.41□□□□□ -0.26
KATNB1-210ENST00000569627 FGF18O76093 207 aa13.41□□□□□ -0.26
KATNB1-210ENST00000569627 ATF7P17544 494 aaPredicted RBP13.41□□□□□ -0.26
KATNB1-210ENST00000569627 CA8P35219 290 aa13.41□□□□□ -0.26
KATNB1-210ENST00000569627 MATR3P43243 847 aaKnown RBP eCLIP13.41□□□□□ -0.26
KATNB1-210ENST00000569627 KRT85P78386 507 aa13.41□□□□□ -0.26
KATNB1-210ENST00000569627 MCM6Q14566 821 aa13.41□□□□□ -0.26
KATNB1-210ENST00000569627 ATF7IP2Q5U623 682 aa13.41□□□□□ -0.26
KATNB1-210ENST00000569627 PDE12Q6L8Q7 609 aaKnown RBP13.41□□□□□ -0.26
KATNB1-210ENST00000569627 POF1BQ8WVV4 589 aa13.41□□□□□ -0.26
KATNB1-210ENST00000569627 SPIRE2Q8WWL2 714 aa13.41□□□□□ -0.26
KATNB1-210ENST00000569627 HLA-CQ95604 372 aa13.41□□□□□ -0.26
KATNB1-210ENST00000569627 BICD1Q96G01 975 aa13.41□□□□□ -0.26
KATNB1-210ENST00000569627 PYM1Q9BRP8 204 aaKnown RBP13.41□□□□□ -0.26
KATNB1-210ENST00000569627 KIFC3Q9BVG8 833 aa13.41□□□□□ -0.26
KATNB1-210ENST00000569627 EIF2AQ9BY44 585 aaKnown RBP13.41□□□□□ -0.26
KATNB1-210ENST00000569627 TBC1D13Q9NVG8 400 aa13.41□□□□□ -0.26
KATNB1-210ENST00000569627 STK39Q9UEW8 545 aa13.41□□□□□ -0.26
KATNB1-210ENST00000569627 SZT2Q5T011 3432 aa13.41□□□□□ -0.26
KATNB1-210ENST00000569627 MYH11P35749 1972 aa13.41□□□□□ -0.26
KATNB1-210ENST00000569627 GRM6O15303 877 aa13.4□□□□□ -0.26
KATNB1-210ENST00000569627 SLC16A4O15374 487 aa13.4□□□□□ -0.26
KATNB1-210ENST00000569627 OFD1O75665 1012 aa13.4□□□□□ -0.26
KATNB1-210ENST00000569627 POMCP01189 267 aa13.4□□□□□ -0.26
KATNB1-210ENST00000569627 ALDH2P05091 517 aa13.4□□□□□ -0.26
KATNB1-210ENST00000569627 ITGB1P05556 798 aa13.4□□□□□ -0.26
KATNB1-210ENST00000569627 SRGAP2BP0DMP2 458 aa13.4□□□□□ -0.26
KATNB1-210ENST00000569627 YARSP54577 528 aaKnown RBP13.4□□□□□ -0.26
KATNB1-210ENST00000569627 AMPD3Q01432 767 aa13.4□□□□□ -0.26
KATNB1-210ENST00000569627 AMHR2Q16671 573 aa13.4□□□□□ -0.26
KATNB1-210ENST00000569627 UBXN11Q5T124 520 aa13.4□□□□□ -0.26
KATNB1-210ENST00000569627 CLEC17AQ6ZS10 378 aa13.4□□□□□ -0.26
KATNB1-210ENST00000569627 CDR2LQ86X02 465 aaPredicted RBP13.4□□□□□ -0.26
KATNB1-210ENST00000569627 SMG8Q8ND04 991 aaKnown RBP13.4□□□□□ -0.26
KATNB1-210ENST00000569627 ATXN2LQ8WWM7 1075 aaKnown RBP13.4□□□□□ -0.26
KATNB1-210ENST00000569627 REEP2Q9BRK0 252 aa13.4□□□□□ -0.26
KATNB1-210ENST00000569627 CCDC113Q9H0I3 377 aa13.4□□□□□ -0.26
KATNB1-210ENST00000569627 CWH43Q9H720 699 aa13.4□□□□□ -0.26
KATNB1-210ENST00000569627 ENTPD7Q9NQZ7 604 aa13.4□□□□□ -0.26
KATNB1-210ENST00000569627 TLR9Q9NR96 1032 aa13.4□□□□□ -0.26
KATNB1-210ENST00000569627 LZTS1Q9Y250 596 aa13.4□□□□□ -0.26
KATNB1-210ENST00000569627 KIAA1671Q9BY89 1806 aa13.4□□□□□ -0.26
KATNB1-210ENST00000569627 TCHHQ07283 1943 aa13.39□□□□□ -0.27
KATNB1-210ENST00000569627 ARL5CA6NH57 179 aa13.39□□□□□ -0.27
KATNB1-210ENST00000569627 K7ENM7 598 aa13.39□□□□□ -0.27
KATNB1-210ENST00000569627 TRAK2O60296 914 aa13.39□□□□□ -0.27
KATNB1-210ENST00000569627 MLH1P40692 756 aa13.39□□□□□ -0.27
KATNB1-210ENST00000569627 BCAR1P56945 870 aa13.39□□□□□ -0.27
KATNB1-210ENST00000569627 MRPS5P82675 430 aaKnown RBP13.39□□□□□ -0.27
KATNB1-210ENST00000569627 PLCB3Q01970 1234 aa13.39□□□□□ -0.27
KATNB1-210ENST00000569627 CACNB1Q02641 598 aaPredicted RBP13.39□□□□□ -0.27
KATNB1-210ENST00000569627 ZNF568Q3ZCX4 644 aa13.39□□□□□ -0.27
KATNB1-210ENST00000569627 AGMOQ6ZNB7 445 aa13.39□□□□□ -0.27
KATNB1-210ENST00000569627 FAM178BQ8IXR5 827 aa13.39□□□□□ -0.27
KATNB1-210ENST00000569627 PDILTQ8N807 584 aa13.39□□□□□ -0.27
KATNB1-210ENST00000569627 SPPL3Q8TCT6 385 aa13.39□□□□□ -0.27
KATNB1-210ENST00000569627 MRPS27Q92552 414 aaKnown RBP13.39□□□□□ -0.27
KATNB1-210ENST00000569627 GAD1Q99259 594 aa13.39□□□□□ -0.27
KATNB1-210ENST00000569627 TMEM175Q9BSA9 504 aa13.39□□□□□ -0.27
KATNB1-210ENST00000569627 NTPCRQ9BSD7 190 aaKnown RBP13.39□□□□□ -0.27
KATNB1-210ENST00000569627 CCDC94Q9BW85 323 aaPredicted RBP13.39□□□□□ -0.27
KATNB1-210ENST00000569627 PANK2Q9BZ23 570 aa13.39□□□□□ -0.27
KATNB1-210ENST00000569627 CUEDC2Q9H467 287 aa13.39□□□□□ -0.27
KATNB1-210ENST00000569627 NXF3Q9H4D5 531 aaKnown RBP13.39□□□□□ -0.27
KATNB1-210ENST00000569627 PDZD7Q9H5P4 517 aa13.39□□□□□ -0.27
KATNB1-210ENST00000569627 TOPORSQ9NS56 1045 aaPredicted RBP13.39□□□□□ -0.27
KATNB1-210ENST00000569627 BLOC1S4Q9NUP1 217 aa13.39□□□□□ -0.27
KATNB1-210ENST00000569627 RNF19AQ9NV58 838 aa13.39□□□□□ -0.27
KATNB1-210ENST00000569627 ARHGAP28Q9P2N2 729 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms