RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 NAT10Q9H0A0 1025 aaKnown RBP25.7■■□□□ 1.7
RAB40C-212ENST00000569575 ABHD14A-ACY1A0A1B0GW23 586 aa25.69■■□□□ 1.7
RAB40C-212ENST00000569575 CLDN3O15551 220 aa25.69■■□□□ 1.7
RAB40C-212ENST00000569575 CALUO43852 315 aaPredicted RBP25.69■■□□□ 1.7
RAB40C-212ENST00000569575 BAIAP3O94812 1187 aa25.69■■□□□ 1.7
RAB40C-212ENST00000569575 BMP6P22004 513 aa25.69■■□□□ 1.7
RAB40C-212ENST00000569575 GARTP22102 1010 aa25.69■■□□□ 1.7
RAB40C-212ENST00000569575 PROZP22891 400 aa25.69■■□□□ 1.7
RAB40C-212ENST00000569575 ITGB8P26012 769 aa25.69■■□□□ 1.7
RAB40C-212ENST00000569575 IKBKEQ14164 716 aa25.69■■□□□ 1.7
RAB40C-212ENST00000569575 TMEM132AQ24JP5 1023 aa25.69■■□□□ 1.7
RAB40C-212ENST00000569575 EDRF1Q3B7T1 1238 aa25.69■■□□□ 1.7
RAB40C-212ENST00000569575 ZSCAN23Q3MJ62 389 aa25.69■■□□□ 1.7
RAB40C-212ENST00000569575 DCAF4L1Q3SXM0 396 aa25.69■■□□□ 1.7
RAB40C-212ENST00000569575 CENPPQ6IPU0 288 aa25.69■■□□□ 1.7
RAB40C-212ENST00000569575 SLC27A1Q6PCB7 646 aa25.69■■□□□ 1.7
RAB40C-212ENST00000569575 RSPH1Q8WYR4 309 aa25.69■■□□□ 1.7
RAB40C-212ENST00000569575 TSG101Q99816 390 aa25.69■■□□□ 1.7
RAB40C-212ENST00000569575 PTPRHQ9HD43 1115 aa25.69■■□□□ 1.7
RAB40C-212ENST00000569575 PIN4Q9Y237 131 aaKnown RBP25.69■■□□□ 1.7
RAB40C-212ENST00000569575 PPP1R3GB7ZBB8 358 aa25.68■■□□□ 1.7
RAB40C-212ENST00000569575 LDHAP00338 332 aaKnown RBP25.68■■□□□ 1.7
RAB40C-212ENST00000569575 CSF2RAP15509 400 aa25.68■■□□□ 1.7
RAB40C-212ENST00000569575 RPL13P26373 211 aaKnown RBP25.68■■□□□ 1.7
RAB40C-212ENST00000569575 DSC3Q14574 896 aa25.68■■□□□ 1.7
RAB40C-212ENST00000569575 PSRC1Q6PGN9 363 aaPredicted RBP25.68■■□□□ 1.7
RAB40C-212ENST00000569575 MPZL3Q6UWV2 235 aa25.68■■□□□ 1.7
RAB40C-212ENST00000569575 HACE1Q8IYU2 909 aa25.68■■□□□ 1.7
RAB40C-212ENST00000569575 DBF4BQ8NFT6 615 aa25.68■■□□□ 1.7
RAB40C-212ENST00000569575 TARS2Q9BW92 718 aaKnown RBP25.68■■□□□ 1.7
RAB40C-212ENST00000569575 FGFBP2Q9BYJ0 223 aa25.68■■□□□ 1.7
RAB40C-212ENST00000569575 KCTD10Q9H3F6 313 aa25.68■■□□□ 1.7
RAB40C-212ENST00000569575 KIAA1586Q9HCI6 787 aa25.68■■□□□ 1.7
RAB40C-212ENST00000569575 RGS18Q9NS28 235 aa25.68■■□□□ 1.7
RAB40C-212ENST00000569575 ZNF623O75123 536 aa25.67■■□□□ 1.7
RAB40C-212ENST00000569575 CSDE1O75534 798 aaKnown RBP25.67■■□□□ 1.7
RAB40C-212ENST00000569575 MCF2P10911 925 aa25.67■■□□□ 1.7
RAB40C-212ENST00000569575 CCNE1P24864 410 aa25.67■■□□□ 1.7
RAB40C-212ENST00000569575 HOXD13P35453 343 aa25.67■■□□□ 1.7
RAB40C-212ENST00000569575 MCL1Q07820 350 aa25.67■■□□□ 1.7
RAB40C-212ENST00000569575 SLC9A9Q8IVB4 645 aa25.67■■□□□ 1.7
RAB40C-212ENST00000569575 GLIS3Q8NEA6 775 aa25.67■■□□□ 1.7
RAB40C-212ENST00000569575 BADQ92934 168 aa25.67■■□□□ 1.7
RAB40C-212ENST00000569575 TCHPQ9BT92 498 aa25.67■■□□□ 1.7
RAB40C-212ENST00000569575 TSPYL2Q9H2G4 693 aaPredicted RBP25.67■■□□□ 1.7
RAB40C-212ENST00000569575 TYRO3Q06418 890 aa25.66■■□□□ 1.7
RAB40C-212ENST00000569575 KCNA1Q09470 495 aa25.66■■□□□ 1.7
RAB40C-212ENST00000569575 PAK1Q13153 545 aa25.66■■□□□ 1.7
RAB40C-212ENST00000569575 ISM2Q6H9L7 571 aa25.66■■□□□ 1.7
RAB40C-212ENST00000569575 SLC24A5Q71RS6 500 aa25.66■■□□□ 1.7
RAB40C-212ENST00000569575 P2RX5Q93086 422 aa25.66■■□□□ 1.7
RAB40C-212ENST00000569575 RWDD2AQ9UIY3 292 aa25.66■■□□□ 1.7
RAB40C-212ENST00000569575 LTBP2Q14767 1821 aa25.65■■□□□ 1.7
RAB40C-212ENST00000569575 A0A0U1RQF3 1178 aa25.65■■□□□ 1.7
RAB40C-212ENST00000569575 SYCE3A1L190 88 aa25.65■■□□□ 1.7
RAB40C-212ENST00000569575 B4GALT5O43286 388 aa25.65■■□□□ 1.7
RAB40C-212ENST00000569575 TGFB1I1O43294 461 aa25.65■■□□□ 1.7
RAB40C-212ENST00000569575 TWF2Q6IBS0 349 aaKnown RBP25.65■■□□□ 1.7
RAB40C-212ENST00000569575 NELFCDQ8IXH7 590 aa25.65■■□□□ 1.7
RAB40C-212ENST00000569575 MTIF3Q9H2K0 278 aaKnown RBP25.65■■□□□ 1.7
RAB40C-212ENST00000569575 TMX1Q9H3N1 280 aa25.65■■□□□ 1.7
RAB40C-212ENST00000569575 PDZD7Q9H5P4 517 aa25.65■■□□□ 1.7
RAB40C-212ENST00000569575 ELAC1Q9H777 363 aaKnown RBP25.65■■□□□ 1.7
RAB40C-212ENST00000569575 DNAH12Q6ZR08 3092 aa25.65■■□□□ 1.7
RAB40C-212ENST00000569575 A0A0B4J269 797 aa25.64■■□□□ 1.7
RAB40C-212ENST00000569575 FGFR1OPO95684 399 aaKnown RBP25.64■■□□□ 1.7
RAB40C-212ENST00000569575 EOMESO95936 686 aa25.64■■□□□ 1.7
RAB40C-212ENST00000569575 FGBP02675 491 aa25.64■■□□□ 1.7
RAB40C-212ENST00000569575 FGFR4P22455 802 aa25.64■■□□□ 1.7
RAB40C-212ENST00000569575 FAM189BP81408 668 aa25.64■■□□□ 1.7
RAB40C-212ENST00000569575 NOLC1Q14978 699 aaKnown RBP eCLIP25.64■■□□□ 1.7
RAB40C-212ENST00000569575 DPCR1Q3MIW9 517 aa25.64■■□□□ 1.7
RAB40C-212ENST00000569575 ZNF568Q3ZCX4 644 aa25.64■■□□□ 1.7
RAB40C-212ENST00000569575 ZCWPW2Q504Y3 356 aa25.64■■□□□ 1.7
RAB40C-212ENST00000569575 DEFB128Q7Z7B8 93 aa25.64■■□□□ 1.7
RAB40C-212ENST00000569575 SMYD4Q8IYR2 804 aaPredicted RBP25.64■■□□□ 1.7
RAB40C-212ENST00000569575 ADAM2Q99965 735 aa25.64■■□□□ 1.7
RAB40C-212ENST00000569575 TRIM6Q9C030 488 aaPredicted RBP25.64■■□□□ 1.7
RAB40C-212ENST00000569575 UBN1Q9NPG3 1134 aa25.64■■□□□ 1.7
RAB40C-212ENST00000569575 AGPAT3Q9NRZ7 376 aa25.64■■□□□ 1.7
RAB40C-212ENST00000569575 MAPK8IP1Q9UQF2 711 aa25.64■■□□□ 1.7
RAB40C-212ENST00000569575 ZMYM2Q9UBW7 1377 aa25.64■■□□□ 1.69
RAB40C-212ENST00000569575 SCN5AQ14524 2016 aa25.64■■□□□ 1.69
RAB40C-212ENST00000569575 FKBP3Q00688 224 aaKnown RBP25.63■■□□□ 1.69
RAB40C-212ENST00000569575 ARMCX5Q6P1M9 558 aa25.63■■□□□ 1.69
RAB40C-212ENST00000569575 POMGNT1Q8WZA1 660 aa25.63■■□□□ 1.69
RAB40C-212ENST00000569575 PGBD4Q96DM1 585 aa25.63■■□□□ 1.69
RAB40C-212ENST00000569575 BPIFA3Q9BQP9 254 aa25.63■■□□□ 1.69
RAB40C-212ENST00000569575 FUCA2Q9BTY2 467 aa25.63■■□□□ 1.69
RAB40C-212ENST00000569575 FAM105AQ9NUU6 356 aa25.63■■□□□ 1.69
RAB40C-212ENST00000569575 ENPP3O14638 875 aa25.62■■□□□ 1.69
RAB40C-212ENST00000569575 ABLIM1O14639 778 aa25.62■■□□□ 1.69
RAB40C-212ENST00000569575 MAPK13O15264 365 aa25.62■■□□□ 1.69
RAB40C-212ENST00000569575 OGTO15294 1046 aa25.62■■□□□ 1.69
RAB40C-212ENST00000569575 CD44P16070 742 aaKnown RBP25.62■■□□□ 1.69
RAB40C-212ENST00000569575 ZNF445P59923 1031 aa25.62■■□□□ 1.69
RAB40C-212ENST00000569575 SLC39A4Q6P5W5 647 aa25.62■■□□□ 1.69
RAB40C-212ENST00000569575 MRPL10Q7Z7H8 261 aaKnown RBP25.62■■□□□ 1.69
RAB40C-212ENST00000569575 TET1Q8NFU7 2136 aa25.62■■□□□ 1.69
RAB40C-212ENST00000569575 NELFBQ8WX92 580 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms