RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 GOLGA6L4A6NEF3 574 aa15.97■□□□□ 0.15
COMMD4-225ENST00000569245 H3BQ06 376 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-225ENST00000569245 B4GALT5O43286 388 aa15.97■□□□□ 0.15
COMMD4-225ENST00000569245 ARF4P18085 180 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-225ENST00000569245 BCAR1P56945 870 aa15.97■□□□□ 0.15
COMMD4-225ENST00000569245 HYAL1Q12794 435 aa15.97■□□□□ 0.15
COMMD4-225ENST00000569245 AGMOQ6ZNB7 445 aa15.97■□□□□ 0.15
COMMD4-225ENST00000569245 RBM23Q86U06 439 aaKnown RBP15.97■□□□□ 0.15
COMMD4-225ENST00000569245 HACE1Q8IYU2 909 aa15.97■□□□□ 0.15
COMMD4-225ENST00000569245 BSNDQ8WZ55 320 aa15.97■□□□□ 0.15
COMMD4-225ENST00000569245 MRPS27Q92552 414 aaKnown RBP15.97■□□□□ 0.15
COMMD4-225ENST00000569245 FAM193BQ96PV7 902 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-225ENST00000569245 UHRF1Q96T88 793 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-225ENST00000569245 MMTAG2Q9BU76 263 aaKnown RBP15.97■□□□□ 0.15
COMMD4-225ENST00000569245 APOL6Q9BWW8 343 aa15.97■□□□□ 0.15
COMMD4-225ENST00000569245 TLE6Q9H808 572 aa15.97■□□□□ 0.15
COMMD4-225ENST00000569245 RSAD1Q9HA92 442 aa15.97■□□□□ 0.15
COMMD4-225ENST00000569245 UBN1Q9NPG3 1134 aa15.97■□□□□ 0.15
COMMD4-225ENST00000569245 TBC1D13Q9NVG8 400 aa15.97■□□□□ 0.15
COMMD4-225ENST00000569245 IPPQ9Y573 584 aa15.97■□□□□ 0.15
COMMD4-225ENST00000569245 RALGAPA2Q2PPJ7 1873 aa15.97■□□□□ 0.15
COMMD4-225ENST00000569245 NT5C1B-RDH14C9J2C7 533 aa15.96■□□□□ 0.15
COMMD4-225ENST00000569245 NPTXRO95502 500 aa15.96■□□□□ 0.15
COMMD4-225ENST00000569245 MBD3O95983 291 aa15.96■□□□□ 0.15
COMMD4-225ENST00000569245 POMCP01189 267 aa15.96■□□□□ 0.15
COMMD4-225ENST00000569245 GTF2F1P35269 517 aaKnown RBP eCLIP15.96■□□□□ 0.15
COMMD4-225ENST00000569245 UBA7P41226 1012 aa15.96■□□□□ 0.15
COMMD4-225ENST00000569245 NAMPTP43490 491 aa15.96■□□□□ 0.15
COMMD4-225ENST00000569245 ERVFC1P60507 584 aa15.96■□□□□ 0.15
COMMD4-225ENST00000569245 PLCB3Q01970 1234 aa15.96■□□□□ 0.15
COMMD4-225ENST00000569245 PRPF4BQ13523 1007 aaKnown RBP15.96■□□□□ 0.15
COMMD4-225ENST00000569245 MAPK6Q16659 721 aa15.96■□□□□ 0.15
COMMD4-225ENST00000569245 AMHR2Q16671 573 aa15.96■□□□□ 0.15
COMMD4-225ENST00000569245 SKOR2Q2VWA4 1001 aaPredicted RBP15.96■□□□□ 0.15
COMMD4-225ENST00000569245 LEXMQ3ZCV2 418 aa15.96■□□□□ 0.15
COMMD4-225ENST00000569245 CDCA2Q69YH5 1023 aaPredicted RBP15.96■□□□□ 0.15
COMMD4-225ENST00000569245 SLC27A1Q6PCB7 646 aa15.96■□□□□ 0.15
COMMD4-225ENST00000569245 CABP7Q86V35 215 aa15.96■□□□□ 0.15
COMMD4-225ENST00000569245 CDR2LQ86X02 465 aaPredicted RBP15.96■□□□□ 0.15
COMMD4-225ENST00000569245 SMG8Q8ND04 991 aaKnown RBP15.96■□□□□ 0.15
COMMD4-225ENST00000569245 RASSF8Q8NHQ8 419 aa15.96■□□□□ 0.15
COMMD4-225ENST00000569245 AK8Q96MA6 479 aa15.96■□□□□ 0.15
COMMD4-225ENST00000569245 TCF25Q9BQ70 676 aa15.96■□□□□ 0.15
COMMD4-225ENST00000569245 NT5C3AQ9H0P0 336 aa15.96■□□□□ 0.15
COMMD4-225ENST00000569245 ENTPD7Q9NQZ7 604 aa15.96■□□□□ 0.15
COMMD4-225ENST00000569245 KANSL3Q9P2N6 904 aa15.96■□□□□ 0.15
COMMD4-225ENST00000569245 LZTS1Q9Y250 596 aa15.96■□□□□ 0.15
COMMD4-225ENST00000569245 HES2Q9Y543 173 aa15.96■□□□□ 0.15
COMMD4-225ENST00000569245 PCDHGC5Q9Y5F6 944 aa15.96■□□□□ 0.15
COMMD4-225ENST00000569245 NLRC5Q86WI3 1866 aa15.96■□□□□ 0.15
COMMD4-225ENST00000569245 FAM237AA0A1B0GTK4 181 aa15.95■□□□□ 0.14
COMMD4-225ENST00000569245 A0A1B0GUA9 196 aa15.95■□□□□ 0.14
COMMD4-225ENST00000569245 CCDC169A6NNP5 214 aa15.95■□□□□ 0.14
COMMD4-225ENST00000569245 PRKCBP05771 671 aa15.95■□□□□ 0.14
COMMD4-225ENST00000569245 CMA1P23946 247 aa15.95■□□□□ 0.14
COMMD4-225ENST00000569245 CA8P35219 290 aa15.95■□□□□ 0.14
COMMD4-225ENST00000569245 NRIP1P48552 1158 aa15.95■□□□□ 0.14
COMMD4-225ENST00000569245 EFNA5P52803 228 aa15.95■□□□□ 0.14
COMMD4-225ENST00000569245 PLPP4Q5VZY2 271 aa15.95■□□□□ 0.14
COMMD4-225ENST00000569245 PDE12Q6L8Q7 609 aaKnown RBP15.95■□□□□ 0.14
COMMD4-225ENST00000569245 TMC7Q7Z402 723 aa15.95■□□□□ 0.14
COMMD4-225ENST00000569245 KCNK18Q7Z418 384 aa15.95■□□□□ 0.14
COMMD4-225ENST00000569245 ADGRD2Q7Z7M1 963 aa15.95■□□□□ 0.14
COMMD4-225ENST00000569245 SLC39A11Q8N1S5 342 aa15.95■□□□□ 0.14
COMMD4-225ENST00000569245 CALML4Q96GE6 196 aa15.95■□□□□ 0.14
COMMD4-225ENST00000569245 TMEM169Q96HH4 297 aa15.95■□□□□ 0.14
COMMD4-225ENST00000569245 PRIMPOLQ96LW4 560 aa15.95■□□□□ 0.14
COMMD4-225ENST00000569245 DRC1Q96MC2 740 aa15.95■□□□□ 0.14
COMMD4-225ENST00000569245 CLIC6Q96NY7 704 aa15.95■□□□□ 0.14
COMMD4-225ENST00000569245 NECAB3Q96P71 396 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-225ENST00000569245 KIFC3Q9BVG8 833 aa15.95■□□□□ 0.14
COMMD4-225ENST00000569245 RUSC1Q9BVN2 902 aa15.95■□□□□ 0.14
COMMD4-225ENST00000569245 RNF39Q9H2S5 420 aa15.95■□□□□ 0.14
COMMD4-225ENST00000569245 FZD8Q9H461 694 aa15.95■□□□□ 0.14
COMMD4-225ENST00000569245 NRDE2Q9H7Z3 1164 aa15.95■□□□□ 0.14
COMMD4-225ENST00000569245 ARID2Q68CP9 1835 aa15.94■□□□□ 0.14
COMMD4-225ENST00000569245 CARNS1A5YM72 827 aa15.94■□□□□ 0.14
COMMD4-225ENST00000569245 PER2O15055 1255 aa15.94■□□□□ 0.14
COMMD4-225ENST00000569245 HIP1RO75146 1068 aa15.94■□□□□ 0.14
COMMD4-225ENST00000569245 LONP1P36776 959 aaKnown RBP15.94■□□□□ 0.14
COMMD4-225ENST00000569245 NDUFV1P49821 464 aa15.94■□□□□ 0.14
COMMD4-225ENST00000569245 AFF1P51825 1210 aaKnown RBP15.94■□□□□ 0.14
COMMD4-225ENST00000569245 PEX3P56589 373 aa15.94■□□□□ 0.14
COMMD4-225ENST00000569245 GRIN1Q05586 938 aa15.94■□□□□ 0.14
COMMD4-225ENST00000569245 BMS1Q14692 1282 aaKnown RBP15.94■□□□□ 0.14
COMMD4-225ENST00000569245 CLUL1Q15846 466 aa15.94■□□□□ 0.14
COMMD4-225ENST00000569245 RESP18Q5W5W9 173 aa15.94■□□□□ 0.14
COMMD4-225ENST00000569245 PTCRAQ6ISU1 281 aaPredicted RBP15.94■□□□□ 0.14
COMMD4-225ENST00000569245 RINT1Q6NUQ1 792 aa15.94■□□□□ 0.14
COMMD4-225ENST00000569245 SHC4Q6S5L8 630 aa15.94■□□□□ 0.14
COMMD4-225ENST00000569245 PPP4R3CPQ6ZMV5 832 aa15.94■□□□□ 0.14
COMMD4-225ENST00000569245 ZNF280BQ86YH2 543 aa15.94■□□□□ 0.14
COMMD4-225ENST00000569245 KCTD17Q8N5Z5 321 aa15.94■□□□□ 0.14
COMMD4-225ENST00000569245 GPT2Q8TD30 523 aa15.94■□□□□ 0.14
COMMD4-225ENST00000569245 PNMA5Q96PV4 448 aa15.94■□□□□ 0.14
COMMD4-225ENST00000569245 GAD1Q99259 594 aa15.94■□□□□ 0.14
COMMD4-225ENST00000569245 NXF3Q9H4D5 531 aaKnown RBP15.94■□□□□ 0.14
COMMD4-225ENST00000569245 NGRNQ9NPE2 291 aaKnown RBP15.94■□□□□ 0.14
COMMD4-225ENST00000569245 PARP2Q9UGN5 583 aa15.94■□□□□ 0.14
COMMD4-225ENST00000569245 FNDC1Q4ZHG4 1894 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms