RNA–Protein interactions for RNA: ENST00000568896.1

SYNGR3-205, Transcript of synaptogyrin 3, humanhuman

TSL 5

Gene SYNGR3, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-205ENST00000568896 CHST12Q9NRB3 414 aa20.24■□□□□ 0.83
SYNGR3-205ENST00000568896 BLOC1S4Q9NUP1 217 aa20.24■□□□□ 0.83
SYNGR3-205ENST00000568896 USP15Q9Y4E8 981 aaPredicted RBP20.24■□□□□ 0.83
SYNGR3-205ENST00000568896 PCDHB12Q9Y5F1 795 aa20.24■□□□□ 0.83
SYNGR3-205ENST00000568896 KIAA1671Q9BY89 1806 aa20.24■□□□□ 0.83
SYNGR3-205ENST00000568896 INO80B-WBP1J3KQ70 363 aa20.23■□□□□ 0.83
SYNGR3-205ENST00000568896 FGF18O76093 207 aa20.23■□□□□ 0.83
SYNGR3-205ENST00000568896 FGFR1P11362 822 aa20.23■□□□□ 0.83
SYNGR3-205ENST00000568896 FAM189BP81408 668 aa20.23■□□□□ 0.83
SYNGR3-205ENST00000568896 MAPK7Q13164 816 aa20.23■□□□□ 0.83
SYNGR3-205ENST00000568896 CDCA2Q69YH5 1023 aaPredicted RBP20.23■□□□□ 0.83
SYNGR3-205ENST00000568896 DAW1Q8N136 415 aa20.23■□□□□ 0.83
SYNGR3-205ENST00000568896 DACT1Q9NYF0 836 aa20.23■□□□□ 0.83
SYNGR3-205ENST00000568896 LOC730098B7Z3J9 87 aa20.22■□□□□ 0.83
SYNGR3-205ENST00000568896 HIP1RO75146 1068 aa20.22■□□□□ 0.83
SYNGR3-205ENST00000568896 ERLIN2O94905 339 aa20.22■□□□□ 0.83
SYNGR3-205ENST00000568896 GUCY2CP25092 1073 aa20.22■□□□□ 0.83
SYNGR3-205ENST00000568896 TXLNAP40222 546 aa20.22■□□□□ 0.83
SYNGR3-205ENST00000568896 NAMPTP43490 491 aa20.22■□□□□ 0.83
SYNGR3-205ENST00000568896 MRE11P49959 708 aa20.22■□□□□ 0.83
SYNGR3-205ENST00000568896 PPP2R5AQ15172 486 aa20.22■□□□□ 0.83
SYNGR3-205ENST00000568896 PCBP1Q15365 356 aaKnown RBP eCLIP20.22■□□□□ 0.83
SYNGR3-205ENST00000568896 AMHR2Q16671 573 aa20.22■□□□□ 0.83
SYNGR3-205ENST00000568896 TWF2Q6IBS0 349 aaKnown RBP20.22■□□□□ 0.83
SYNGR3-205ENST00000568896 ECHDC2Q86YB7 292 aa20.22■□□□□ 0.83
SYNGR3-205ENST00000568896 COLGALT1Q8NBJ5 622 aa20.22■□□□□ 0.83
SYNGR3-205ENST00000568896 RAD54LQ92698 747 aa20.22■□□□□ 0.83
SYNGR3-205ENST00000568896 MFSD14AQ96MC6 490 aa20.22■□□□□ 0.83
SYNGR3-205ENST00000568896 CWH43Q9H720 699 aa20.22■□□□□ 0.83
SYNGR3-205ENST00000568896 ELAC1Q9H777 363 aaKnown RBP20.22■□□□□ 0.83
SYNGR3-205ENST00000568896 TLR9Q9NR96 1032 aa20.22■□□□□ 0.83
SYNGR3-205ENST00000568896 AAASQ9NRG9 546 aa20.22■□□□□ 0.83
SYNGR3-205ENST00000568896 RNF216Q9NWF9 866 aaPredicted RBP20.22■□□□□ 0.83
SYNGR3-205ENST00000568896 TMEM161AQ9NX61 479 aa20.22■□□□□ 0.83
SYNGR3-205ENST00000568896 A0A0U1RQF3 1178 aa20.21■□□□□ 0.83
SYNGR3-205ENST00000568896 TSPAN1O60635 241 aa20.21■□□□□ 0.83
SYNGR3-205ENST00000568896 HOXA11P31270 313 aaPredicted RBP20.21■□□□□ 0.83
SYNGR3-205ENST00000568896 UBE3AQ05086 875 aa20.21■□□□□ 0.83
SYNGR3-205ENST00000568896 DUSP6Q16828 381 aa20.21■□□□□ 0.83
SYNGR3-205ENST00000568896 ZBTB8OSQ8IWT0 167 aa20.21■□□□□ 0.83
SYNGR3-205ENST00000568896 THNSL1Q8IYQ7 743 aa20.21■□□□□ 0.83
SYNGR3-205ENST00000568896 DEPTORQ8TB45 409 aa20.21■□□□□ 0.83
SYNGR3-205ENST00000568896 KCNG4Q8TDN1 519 aa20.21■□□□□ 0.83
SYNGR3-205ENST00000568896 RPGRIP1Q96KN7 1286 aa20.21■□□□□ 0.83
SYNGR3-205ENST00000568896 IFT74Q96LB3 600 aa20.21■□□□□ 0.83
SYNGR3-205ENST00000568896 DRC1Q96MC2 740 aa20.21■□□□□ 0.83
SYNGR3-205ENST00000568896 TIPINQ9BVW5 301 aa20.21■□□□□ 0.83
SYNGR3-205ENST00000568896 TRAIPQ9BWF2 469 aa20.21■□□□□ 0.83
SYNGR3-205ENST00000568896 KCND2Q9NZV8 630 aa20.21■□□□□ 0.83
SYNGR3-205ENST00000568896 CCDC39Q9UFE4 941 aa20.21■□□□□ 0.83
SYNGR3-205ENST00000568896 CFAP45Q9UL16 551 aa20.21■□□□□ 0.83
SYNGR3-205ENST00000568896 TECTAO75443 2155 aa20.2■□□□□ 0.82
SYNGR3-205ENST00000568896 FSCN2O14926 492 aa20.2■□□□□ 0.82
SYNGR3-205ENST00000568896 ATF7P17544 494 aaPredicted RBP20.2■□□□□ 0.82
SYNGR3-205ENST00000568896 DDIT3P35638 169 aa20.2■□□□□ 0.82
SYNGR3-205ENST00000568896 RAD51AP2Q09MP3 1159 aa20.2■□□□□ 0.82
SYNGR3-205ENST00000568896 DHX8Q14562 1220 aaKnown RBP20.2■□□□□ 0.82
SYNGR3-205ENST00000568896 MCM6Q14566 821 aa20.2■□□□□ 0.82
SYNGR3-205ENST00000568896 ARSHQ5FYA8 562 aa20.2■□□□□ 0.82
SYNGR3-205ENST00000568896 LRRC55Q6ZSA7 311 aa20.2■□□□□ 0.82
SYNGR3-205ENST00000568896 TRIM67Q6ZTA4 783 aa20.2■□□□□ 0.82
SYNGR3-205ENST00000568896 GPBP1Q86WP2 473 aa20.2■□□□□ 0.82
SYNGR3-205ENST00000568896 LARP4BQ92615 738 aaKnown RBP20.2■□□□□ 0.82
SYNGR3-205ENST00000568896 CHAMP1Q96JM3 812 aa20.2■□□□□ 0.82
SYNGR3-205ENST00000568896 KIFC3Q9BVG8 833 aa20.2■□□□□ 0.82
SYNGR3-205ENST00000568896 C2orf40Q9H1Z8 148 aa20.2■□□□□ 0.82
SYNGR3-205ENST00000568896 RNF19AQ9NV58 838 aa20.2■□□□□ 0.82
SYNGR3-205ENST00000568896 STK17AQ9UEE5 414 aa20.2■□□□□ 0.82
SYNGR3-205ENST00000568896 A0A087X0B3 334 aa20.19■□□□□ 0.82
SYNGR3-205ENST00000568896 NPHP3-ACAD11A0A0J9YXS1 232 aa20.19■□□□□ 0.82
SYNGR3-205ENST00000568896 TMEM221A6NGB7 291 aa20.19■□□□□ 0.82
SYNGR3-205ENST00000568896 M0R296 226 aa20.19■□□□□ 0.82
SYNGR3-205ENST00000568896 B4GALT5O43286 388 aa20.19■□□□□ 0.82
SYNGR3-205ENST00000568896 CUTAO60888 179 aa20.19■□□□□ 0.82
SYNGR3-205ENST00000568896 CBX2Q14781 532 aaPredicted RBP20.19■□□□□ 0.82
SYNGR3-205ENST00000568896 AXDND1Q5T1B0 1012 aaPredicted RBP20.19■□□□□ 0.82
SYNGR3-205ENST00000568896 IER5LQ5T953 404 aa20.19■□□□□ 0.82
SYNGR3-205ENST00000568896 RRAGBQ5VZM2 374 aa20.19■□□□□ 0.82
SYNGR3-205ENST00000568896 PLPP4Q5VZY2 271 aa20.19■□□□□ 0.82
SYNGR3-205ENST00000568896 ZNF598Q86UK7 904 aaKnown RBP20.19■□□□□ 0.82
SYNGR3-205ENST00000568896 PHF7Q9BWX1 381 aaPredicted RBP20.19■□□□□ 0.82
SYNGR3-205ENST00000568896 CCDC113Q9H0I3 377 aa20.19■□□□□ 0.82
SYNGR3-205ENST00000568896 KCNH6Q9H252 994 aa20.19■□□□□ 0.82
SYNGR3-205ENST00000568896 FAM105AQ9NUU6 356 aa20.19■□□□□ 0.82
SYNGR3-205ENST00000568896 RCOR1Q9UKL0 485 aa20.19■□□□□ 0.82
SYNGR3-205ENST00000568896 PLXNA4Q9HCM2 1894 aa20.19■□□□□ 0.82
SYNGR3-205ENST00000568896 SFI1A8K8P3 1242 aa20.18■□□□□ 0.82
SYNGR3-205ENST00000568896 ARF4P18085 180 aaPredicted RBP20.18■□□□□ 0.82
SYNGR3-205ENST00000568896 AXLP30530 894 aa20.18■□□□□ 0.82
SYNGR3-205ENST00000568896 PBX3P40426 434 aa20.18■□□□□ 0.82
SYNGR3-205ENST00000568896 NPTX2P47972 431 aa20.18■□□□□ 0.82
SYNGR3-205ENST00000568896 ME1P48163 572 aa20.18■□□□□ 0.82
SYNGR3-205ENST00000568896 RAB27AP51159 221 aa20.18■□□□□ 0.82
SYNGR3-205ENST00000568896 PEX3P56589 373 aa20.18■□□□□ 0.82
SYNGR3-205ENST00000568896 ZXDAP98168 799 aa20.18■□□□□ 0.82
SYNGR3-205ENST00000568896 UBXN11Q5T124 520 aa20.18■□□□□ 0.82
SYNGR3-205ENST00000568896 SHC4Q6S5L8 630 aa20.18■□□□□ 0.82
SYNGR3-205ENST00000568896 PPP4R3CPQ6ZMV5 832 aa20.18■□□□□ 0.82
SYNGR3-205ENST00000568896 RNF169Q8NCN4 708 aa20.18■□□□□ 0.82
SYNGR3-205ENST00000568896 PBXIP1Q96AQ6 731 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms