RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 GLUD2P49448 558 aa17.58■□□□□ 0.4
HERPUD1-215ENST00000568676 POU5F1BQ06416 359 aa17.58■□□□□ 0.4
HERPUD1-215ENST00000568676 MXD4Q14582 209 aaPredicted RBP17.58■□□□□ 0.4
HERPUD1-215ENST00000568676 UBXN11Q5T124 520 aa17.58■□□□□ 0.4
HERPUD1-215ENST00000568676 RUFY3Q7L099 469 aa17.58■□□□□ 0.4
HERPUD1-215ENST00000568676 COLGALT2Q8IYK4 626 aa17.58■□□□□ 0.4
HERPUD1-215ENST00000568676 HACE1Q8IYU2 909 aa17.58■□□□□ 0.4
HERPUD1-215ENST00000568676 RNF168Q8IYW5 571 aaPredicted RBP17.58■□□□□ 0.4
HERPUD1-215ENST00000568676 ADSSL1Q8N142 457 aa17.58■□□□□ 0.4
HERPUD1-215ENST00000568676 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.58■□□□□ 0.4
HERPUD1-215ENST00000568676 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.58■□□□□ 0.4
HERPUD1-215ENST00000568676 VAV3Q9UKW4 847 aa17.58■□□□□ 0.4
HERPUD1-215ENST00000568676 CCDC194A0A1B0GVG4 234 aa17.57■□□□□ 0.4
HERPUD1-215ENST00000568676 EML1O00423 815 aa17.57■□□□□ 0.4
HERPUD1-215ENST00000568676 TEX28O15482 410 aa17.57■□□□□ 0.4
HERPUD1-215ENST00000568676 PI15O43692 258 aa17.57■□□□□ 0.4
HERPUD1-215ENST00000568676 EFEMP2O95967 443 aa17.57■□□□□ 0.4
HERPUD1-215ENST00000568676 XBP1P17861 261 aa17.57■□□□□ 0.4
HERPUD1-215ENST00000568676 YWHABP31946 246 aaKnown RBP17.57■□□□□ 0.4
HERPUD1-215ENST00000568676 GBP2P32456 591 aaPredicted RBP17.57■□□□□ 0.4
HERPUD1-215ENST00000568676 OR1G1P47890 313 aa17.57■□□□□ 0.4
HERPUD1-215ENST00000568676 NPEPPSP55786 919 aa17.57■□□□□ 0.4
HERPUD1-215ENST00000568676 DSG1Q02413 1049 aa17.57■□□□□ 0.4
HERPUD1-215ENST00000568676 CREMQ03060 361 aa17.57■□□□□ 0.4
HERPUD1-215ENST00000568676 DSC1Q08554 894 aa17.57■□□□□ 0.4
HERPUD1-215ENST00000568676 EPHA7Q15375 998 aa17.57■□□□□ 0.4
HERPUD1-215ENST00000568676 INF2Q27J81 1249 aa17.57■□□□□ 0.4
HERPUD1-215ENST00000568676 KIAA0319Q5VV43 1072 aa17.57■□□□□ 0.4
HERPUD1-215ENST00000568676 NOTUMQ6P988 496 aa17.57■□□□□ 0.4
HERPUD1-215ENST00000568676 NEK8Q86SG6 692 aa17.57■□□□□ 0.4
HERPUD1-215ENST00000568676 FERMT3Q86UX7 667 aa17.57■□□□□ 0.4
HERPUD1-215ENST00000568676 RNF149Q8NC42 400 aa17.57■□□□□ 0.4
HERPUD1-215ENST00000568676 TMEM143Q96AN5 459 aa17.57■□□□□ 0.4
HERPUD1-215ENST00000568676 MINDY3Q9H8M7 445 aa17.57■□□□□ 0.4
HERPUD1-215ENST00000568676 ZDHHC7Q9NXF8 308 aa17.57■□□□□ 0.4
HERPUD1-215ENST00000568676 ZMYM2Q9UBW7 1377 aa17.56■□□□□ 0.4
HERPUD1-215ENST00000568676 ARL5CA6NH57 179 aa17.56■□□□□ 0.4
HERPUD1-215ENST00000568676 C2CD2LO14523 706 aa17.56■□□□□ 0.4
HERPUD1-215ENST00000568676 SLC37A4O43826 429 aa17.56■□□□□ 0.4
HERPUD1-215ENST00000568676 SRFP11831 508 aa17.56■□□□□ 0.4
HERPUD1-215ENST00000568676 RFX1P22670 979 aa17.56■□□□□ 0.4
HERPUD1-215ENST00000568676 ID4P47928 161 aa17.56■□□□□ 0.4
HERPUD1-215ENST00000568676 AFF1P51825 1210 aaKnown RBP17.56■□□□□ 0.4
HERPUD1-215ENST00000568676 TFDP1Q14186 410 aa17.56■□□□□ 0.4
HERPUD1-215ENST00000568676 EMC2Q15006 297 aa17.56■□□□□ 0.4
HERPUD1-215ENST00000568676 NPY5RQ15761 445 aa17.56■□□□□ 0.4
HERPUD1-215ENST00000568676 IFNLR1Q8IU57 520 aaPredicted RBP17.56■□□□□ 0.4
HERPUD1-215ENST00000568676 SMG8Q8ND04 991 aaKnown RBP17.56■□□□□ 0.4
HERPUD1-215ENST00000568676 LXNQ9BS40 222 aa17.56■□□□□ 0.4
HERPUD1-215ENST00000568676 COLEC11Q9BWP8 271 aa17.56■□□□□ 0.4
HERPUD1-215ENST00000568676 ZSWIM4Q9H7M6 989 aa17.56■□□□□ 0.4
HERPUD1-215ENST00000568676 ZSWIM6Q9HCJ5 1215 aa17.56■□□□□ 0.4
HERPUD1-215ENST00000568676 CHST7Q9NS84 486 aa17.56■□□□□ 0.4
HERPUD1-215ENST00000568676 MARCH5Q9NX47 278 aa17.56■□□□□ 0.4
HERPUD1-215ENST00000568676 GIT1Q9Y2X7 761 aa17.56■□□□□ 0.4
HERPUD1-215ENST00000568676 PRG3Q9Y2Y8 225 aaPredicted RBP17.56■□□□□ 0.4
HERPUD1-215ENST00000568676 IPPQ9Y573 584 aa17.56■□□□□ 0.4
HERPUD1-215ENST00000568676 ZFP37Q9Y6Q3 630 aaPredicted RBP17.56■□□□□ 0.4
HERPUD1-215ENST00000568676 FAM186AA6NE01 2351 aa17.55■□□□□ 0.4
HERPUD1-215ENST00000568676 RIF1Q5UIP0 2472 aaKnown RBP17.55■□□□□ 0.4
HERPUD1-215ENST00000568676 MARCH6O60337 910 aa17.55■□□□□ 0.4
HERPUD1-215ENST00000568676 CDKL5O76039 1030 aa17.55■□□□□ 0.4
HERPUD1-215ENST00000568676 PTENP60484 403 aa17.55■□□□□ 0.4
HERPUD1-215ENST00000568676 TOB2Q14106 344 aaPredicted RBP17.55■□□□□ 0.4
HERPUD1-215ENST00000568676 PHLDB3Q6NSJ2 640 aa17.55■□□□□ 0.4
HERPUD1-215ENST00000568676 SLFN12Q8IYM2 578 aa17.55■□□□□ 0.4
HERPUD1-215ENST00000568676 SLC44A3Q8N4M1 653 aa17.55■□□□□ 0.4
HERPUD1-215ENST00000568676 SMG7Q92540 1137 aaKnown RBP17.55■□□□□ 0.4
HERPUD1-215ENST00000568676 MTRQ99707 1265 aa17.55■□□□□ 0.4
HERPUD1-215ENST00000568676 CSRNP2Q9H175 543 aa17.55■□□□□ 0.4
HERPUD1-215ENST00000568676 FNIP2Q9P278 1114 aa17.55■□□□□ 0.4
HERPUD1-215ENST00000568676 CYP46A1Q9Y6A2 500 aa17.55■□□□□ 0.4
HERPUD1-215ENST00000568676 C2orf16Q68DN1 1984 aa17.55■□□□□ 0.4
HERPUD1-215ENST00000568676 STK25O00506 426 aa17.54■□□□□ 0.4
HERPUD1-215ENST00000568676 TSPAN1O60635 241 aa17.54■□□□□ 0.4
HERPUD1-215ENST00000568676 N4BP1O75113 896 aaKnown RBP17.54■□□□□ 0.4
HERPUD1-215ENST00000568676 MLH1P40692 756 aa17.54■□□□□ 0.4
HERPUD1-215ENST00000568676 USP41Q3LFD5 358 aa17.54■□□□□ 0.4
HERPUD1-215ENST00000568676 XKR9Q5GH70 373 aa17.54■□□□□ 0.4
HERPUD1-215ENST00000568676 ZC3H14Q6PJT7 736 aaKnown RBP17.54■□□□□ 0.4
HERPUD1-215ENST00000568676 ZNF579Q8NAF0 562 aaKnown RBP17.54■□□□□ 0.4
HERPUD1-215ENST00000568676 FEZF2Q8TBJ5 459 aa17.54■□□□□ 0.4
HERPUD1-215ENST00000568676 GAD1Q99259 594 aa17.54■□□□□ 0.4
HERPUD1-215ENST00000568676 NFKBIZQ9BYH8 718 aa17.54■□□□□ 0.4
HERPUD1-215ENST00000568676 TM6SF1Q9BZW5 370 aa17.54■□□□□ 0.4
HERPUD1-215ENST00000568676 TRIM6Q9C030 488 aaPredicted RBP17.54■□□□□ 0.4
HERPUD1-215ENST00000568676 PIDD1Q9HB75 910 aa17.54■□□□□ 0.4
HERPUD1-215ENST00000568676 WRAP73Q9P2S5 460 aaPredicted RBP17.54■□□□□ 0.4
HERPUD1-215ENST00000568676 DAXXQ9UER7 740 aaPredicted RBP17.54■□□□□ 0.4
HERPUD1-215ENST00000568676 DMDP11532 3685 aa17.53■□□□□ 0.4
HERPUD1-215ENST00000568676 CCNT1O60563 726 aaKnown RBP17.53■□□□□ 0.4
HERPUD1-215ENST00000568676 BAG4O95429 457 aaKnown RBP17.53■□□□□ 0.4
HERPUD1-215ENST00000568676 LMNAP02545 664 aaKnown RBP17.53■□□□□ 0.4
HERPUD1-215ENST00000568676 CFHP08603 1231 aa17.53■□□□□ 0.4
HERPUD1-215ENST00000568676 TAS1R1Q7RTX1 841 aa17.53■□□□□ 0.4
HERPUD1-215ENST00000568676 BORCS6Q96GS4 357 aa17.53■□□□□ 0.4
HERPUD1-215ENST00000568676 PHF20Q9BVI0 1012 aa17.53■□□□□ 0.4
HERPUD1-215ENST00000568676 NT5C3AQ9H0P0 336 aa17.53■□□□□ 0.4
HERPUD1-215ENST00000568676 KRBA1A5PL33 1030 aa17.52■□□□□ 0.4
HERPUD1-215ENST00000568676 INO80B-WBP1J3KQ70 363 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms