RNA–Protein interactions for RNA: ENST00000568310.1

DNAAF4-CCPG1-202, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2

Gene DNAAF4-CCPG1, Length 1,293 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-202ENST00000568310 HOMER1Q86YM7 354 aa9.68□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 BCL6BQ8N143 479 aaPredicted RBP9.68□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 OR14A2Q96R54 314 aa9.68□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 ADOQ96SZ5 270 aa9.68□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 PLA2G12BQ9BX93 195 aa9.68□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 PRDM11Q9NQV5 511 aa9.68□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 INTS7Q9NVH2 962 aaKnown RBP9.68□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 SLC30A1Q9Y6M5 507 aa9.68□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 NWD2Q9ULI1 1742 aa9.68□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 BLMP54132 1417 aaPredicted RBP9.67□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 ACEP12821 1306 aa9.67□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 RPS19P39019 145 aaKnown RBP9.67□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 RGS3P49796 1198 aa9.67□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 NBPF8Q3BBV2 869 aa9.67□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 POLNQ7Z5Q5 900 aa9.67□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 OR14K1Q8NGZ2 314 aa9.67□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 MAML3Q96JK9 1138 aa9.67□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 C16orf92Q96LL3 132 aa9.67□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 VWA7Q9Y334 891 aa9.67□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 UBA6A0AVT1 1052 aaPredicted RBP9.66□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 HGFACQ04756 655 aa9.66□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 TTC38Q5R3I4 469 aa9.66□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 EDAQ92838 391 aa9.66□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 SIN3AQ96ST3 1273 aa9.66□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 COL14A1Q05707 1796 aaKnown RBP9.65□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 ITSN1Q15811 1721 aa9.65□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 NRAPQ86VF7 1730 aa9.65□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 KIAA0232Q92628 1395 aa9.65□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 CENPJQ9HC77 1338 aaPredicted RBP9.65□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 PTX3P26022 381 aaPredicted RBP9.65□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 SLFN12LQ6IEE8 588 aa9.65□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 NME9Q86XW9 330 aa9.65□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 SAE1Q9UBE0 346 aaPredicted RBP9.65□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 CD2APQ9Y5K6 639 aa9.65□□□□□ -0.86
DNAAF4-CCPG1-202ENST00000568310 KIAA1210Q9ULL0 1709 aa9.65□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 POLR3AO14802 1390 aaPredicted RBP9.64□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 SPATA31A5Q5VU36 1347 aa9.64□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 SPATA31A7Q8IWB4 1347 aa9.64□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 SLC9A1P19634 815 aa9.64□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 ACO1P21399 889 aaKnown RBP9.64□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 ADAM15Q13444 863 aa9.64□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 EPHA7Q15375 998 aa9.64□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 KLHDC10Q6PID8 442 aa9.64□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 Q6ZSN1 163 aa9.64□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 APPBP2Q92624 585 aa9.64□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 TUBGCP5Q96RT8 1024 aa9.64□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 ORAI3Q9BRQ5 295 aa9.64□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 CRYBG1Q9Y4K1 1723 aa9.64□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 SLC26A4O43511 780 aa9.63□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 SESN2P58004 480 aaPredicted RBP9.63□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 C21orf62-AS1Q17RA5 79 aa9.63□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 C16orf86Q6ZW13 317 aa9.63□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 NPM2Q86SE8 214 aaKnown RBP9.63□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 GPR135Q8IZ08 494 aa9.63□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 ELF4Q99607 663 aaPredicted RBP9.63□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 NELFAQ9H3P2 528 aa9.63□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 FANCLQ9NW38 375 aa9.63□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 PLA2G3Q9NZ20 509 aa9.63□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 MAGEL2Q9UJ55 1249 aa9.63□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 ZKSCAN5Q9Y2L8 839 aa9.63□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 CTDP1Q9Y5B0 961 aaPredicted RBP9.63□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 PPIP5K1Q6PFW1 1433 aa9.63□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 TOPAZ1Q8N9V7 1692 aa9.62□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 PMS2P1A4D2B8 440 aa9.62□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 H2AFYO75367 372 aaKnown RBP9.62□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 ANTXR2P58335 489 aa9.62□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 EVA1CP58658 441 aa9.62□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 DGKDQ16760 1214 aa9.62□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 PRAMEF9Q5VWM5 478 aa9.62□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 OR5AN1Q8NGI8 311 aa9.62□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 LPPQ93052 612 aa9.62□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 GFM2Q969S9 779 aaKnown RBP9.62□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 OXSMQ9NWU1 459 aa9.62□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 KCMF1Q9P0J7 381 aa9.62□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 USP35Q9P2H5 1018 aa9.62□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 DENND2AQ9ULE3 1009 aa9.62□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 SPO11Q9Y5K1 396 aa9.62□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 SPATA31A1Q5TZJ5 1347 aa9.61□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 PHRF1Q9P1Y6 1649 aaKnown RBP9.61□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 AMHP03971 560 aa9.61□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 C6P13671 934 aa9.61□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 TACR2P21452 398 aa9.61□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 NEK4P51957 841 aa9.61□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 ADCY1Q08828 1119 aa9.61□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 FOXL1Q12952 345 aa9.61□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 TKFCQ3LXA3 575 aa9.61□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 CREB3L3Q68CJ9 461 aa9.61□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 CRIP3Q6Q6R5 217 aa9.61□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 MAMDC4Q6UXC1 1216 aa9.61□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 KIF18BQ86Y91 864 aa9.61□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 SHCBP1Q8NEM2 672 aa9.61□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 FAM89AQ96GI7 184 aa9.61□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 ZNF747Q9BV97 191 aa9.61□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 VPS11Q9H270 941 aa9.61□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 KPNA6O60684 536 aa9.6□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 ATP2A2P16615 1042 aaKnown RBP9.6□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 MSX2P35548 267 aaPredicted RBP9.6□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 GRM7Q14831 915 aa9.6□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 LRRTM3Q86VH5 581 aa9.6□□□□□ -0.87
DNAAF4-CCPG1-202ENST00000568310 NINJ1Q92982 152 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms