RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 NLRP12P59046 1061 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 GRIN1Q05586 938 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 NEDD9Q14511 834 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 IL17AQ16552 155 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 TMEM266Q2M3C6 531 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 SLC9C1Q4G0N8 1177 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 CELF3Q5SZQ8 465 aaKnown RBP8.69□□□□□ -1.02
SMG1-214ENST00000568038 ARL6IP4Q66PJ3 421 aaKnown RBP8.69□□□□□ -1.02
SMG1-214ENST00000568038 NCAPH2Q6IBW4 605 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 DTHD1Q6ZMT9 781 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 CYFIP1Q7L576 1253 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 DHX37Q8IY37 1157 aaKnown RBP8.69□□□□□ -1.02
SMG1-214ENST00000568038 KCNG4Q8TDN1 519 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 GBP4Q96PP9 640 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 RIT2Q99578 217 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 OSMRQ99650 979 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 SENP7Q9BQF6 1050 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 CEP41Q9BYV8 373 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 UNC45AQ9H3U1 944 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 MLXIPQ9HAP2 919 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 TBC1D22BQ9NU19 505 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 TCEAL9Q9UHQ7 104 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 NRBP1Q9UHY1 535 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 FBXO2Q9UK22 296 aaPredicted RBP8.69□□□□□ -1.02
SMG1-214ENST00000568038 PCDHA7Q9UN72 937 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 RAXQ9Y2V3 346 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 NFASCO94856 1347 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 DYNC1LI2O43237 492 aaPredicted RBP8.68□□□□□ -1.02
SMG1-214ENST00000568038 PPP6R2O75170 966 aa8.68□□□□□ -1.02
SMG1-214ENST00000568038 TNFRSF21O75509 655 aa8.68□□□□□ -1.02
SMG1-214ENST00000568038 FARP2O94887 1054 aaPredicted RBP8.68□□□□□ -1.02
SMG1-214ENST00000568038 AKR1A1P14550 325 aa8.68□□□□□ -1.02
SMG1-214ENST00000568038 CDC25AP30304 524 aa8.68□□□□□ -1.02
SMG1-214ENST00000568038 PKN2Q16513 984 aaKnown RBP8.68□□□□□ -1.02
SMG1-214ENST00000568038 DUSP28Q4G0W2 176 aa8.68□□□□□ -1.02
SMG1-214ENST00000568038 SPECC1Q5M775 1068 aa8.68□□□□□ -1.02
SMG1-214ENST00000568038 MAP3K21Q5TCX8 1036 aa8.68□□□□□ -1.02
SMG1-214ENST00000568038 FBXO46Q6PJ61 603 aaPredicted RBP8.68□□□□□ -1.02
SMG1-214ENST00000568038 CLEC17AQ6ZS10 378 aa8.68□□□□□ -1.02
SMG1-214ENST00000568038 Q6ZS46 218 aa8.68□□□□□ -1.02
SMG1-214ENST00000568038 GIMAP8Q8ND71 665 aaPredicted RBP8.68□□□□□ -1.02
SMG1-214ENST00000568038 OR6J1Q8NGC5 347 aa8.68□□□□□ -1.02
SMG1-214ENST00000568038 FERMT2Q96AC1 680 aa8.68□□□□□ -1.02
SMG1-214ENST00000568038 SPATA33Q96N06 139 aa8.68□□□□□ -1.02
SMG1-214ENST00000568038 CSRNP2Q9H175 543 aa8.68□□□□□ -1.02
SMG1-214ENST00000568038 PRDM10Q9NQV6 1147 aa8.68□□□□□ -1.02
SMG1-214ENST00000568038 STOML1Q9UBI4 398 aa8.68□□□□□ -1.02
SMG1-214ENST00000568038 SLC9A2Q9UBY0 812 aa8.68□□□□□ -1.02
SMG1-214ENST00000568038 TELO2Q9Y4R8 837 aa8.68□□□□□ -1.02
SMG1-214ENST00000568038 SAMM50Q9Y512 469 aa8.68□□□□□ -1.02
SMG1-214ENST00000568038 SRPRBQ9Y5M8 271 aaKnown RBP8.68□□□□□ -1.02
SMG1-214ENST00000568038 GOLGA6L4A6NEF3 574 aa8.67□□□□□ -1.02
SMG1-214ENST00000568038 PP2D1A8MPX8 630 aa8.67□□□□□ -1.02
SMG1-214ENST00000568038 NOP56O00567 594 aaKnown RBP8.67□□□□□ -1.02
SMG1-214ENST00000568038 TM4SF5O14894 197 aa8.67□□□□□ -1.02
SMG1-214ENST00000568038 NKRFO15226 690 aaKnown RBP eCLIP8.67□□□□□ -1.02
SMG1-214ENST00000568038 SEPT4O43236 478 aa8.67□□□□□ -1.02
SMG1-214ENST00000568038 FZD6O60353 706 aa8.67□□□□□ -1.02
SMG1-214ENST00000568038 CUTAO60888 179 aa8.67□□□□□ -1.02
SMG1-214ENST00000568038 PRPF40AO75400 957 aaKnown RBP8.67□□□□□ -1.02
SMG1-214ENST00000568038 CCNE2O96020 404 aa8.67□□□□□ -1.02
SMG1-214ENST00000568038 LONP1P36776 959 aaKnown RBP8.67□□□□□ -1.02
SMG1-214ENST00000568038 SPIRE1Q08AE8 756 aa8.67□□□□□ -1.02
SMG1-214ENST00000568038 PPP2R5CQ13362 524 aa8.67□□□□□ -1.02
SMG1-214ENST00000568038 AXDND1Q5T1B0 1012 aaPredicted RBP8.67□□□□□ -1.02
SMG1-214ENST00000568038 HGSNATQ68CP4 663 aa8.67□□□□□ -1.02
SMG1-214ENST00000568038 METTL7BQ6UX53 244 aa8.67□□□□□ -1.02
SMG1-214ENST00000568038 MIER3Q7Z3K6 550 aa8.67□□□□□ -1.02
SMG1-214ENST00000568038 TLK2Q86UE8 772 aa8.67□□□□□ -1.02
SMG1-214ENST00000568038 ASAP3Q8TDY4 903 aa8.67□□□□□ -1.02
SMG1-214ENST00000568038 AFG1LQ8WV93 481 aa8.67□□□□□ -1.02
SMG1-214ENST00000568038 UTP4Q969X6 686 aaKnown RBP8.67□□□□□ -1.02
SMG1-214ENST00000568038 RAB34Q9BZG1 259 aa8.67□□□□□ -1.02
SMG1-214ENST00000568038 AP5M1Q9H0R1 490 aa8.67□□□□□ -1.02
SMG1-214ENST00000568038 DOCK5Q9H7D0 1870 aa8.67□□□□□ -1.02
SMG1-214ENST00000568038 LRWD1Q9UFC0 647 aa8.67□□□□□ -1.02
SMG1-214ENST00000568038 VAV3Q9UKW4 847 aa8.67□□□□□ -1.02
SMG1-214ENST00000568038 RNF112Q9ULX5 631 aa8.67□□□□□ -1.02
SMG1-214ENST00000568038 GNEQ9Y223 722 aaKnown RBP8.67□□□□□ -1.02
SMG1-214ENST00000568038 MORC2Q9Y6X9 1032 aaPredicted RBP8.67□□□□□ -1.02
SMG1-214ENST00000568038 ELP1O95163 1332 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 WDR64B1ANS9 1081 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 GOLGA6L22H0YM25 854 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 SART1O43290 800 aaKnown RBP8.66□□□□□ -1.02
SMG1-214ENST00000568038 GADD45BO75293 160 aaPredicted RBP8.66□□□□□ -1.02
SMG1-214ENST00000568038 DUSP11O75319 330 aaKnown RBP8.66□□□□□ -1.02
SMG1-214ENST00000568038 PGK1P00558 417 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 RARBP10826 455 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 NPR3P17342 541 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 ARL4DP49703 201 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 ACTR2P61160 394 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 BEX3Q00994 111 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 CYP4A11Q02928 519 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 ARHGAP1Q07960 439 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 PDIA5Q14554 519 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 EPHA7Q15375 998 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 ZRSR1Q15695 479 aaKnown RBP8.66□□□□□ -1.02
SMG1-214ENST00000568038 HSDL1Q3SXM5 330 aa8.66□□□□□ -1.02
SMG1-214ENST00000568038 UTP14CQ5TAP6 766 aaKnown RBP8.66□□□□□ -1.02
SMG1-214ENST00000568038 ADALQ6DHV7 355 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms